RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 RTKN2Q8IZC4 609 aa8.5□□□□□ -1.05
CASP4-204ENST00000524843 CMTR1Q8N1G2 835 aaKnown RBP8.5□□□□□ -1.05
CASP4-204ENST00000524843 AOPEPQ8N6M6 819 aa8.5□□□□□ -1.05
CASP4-204ENST00000524843 PIBF1Q8WXW3 757 aa8.5□□□□□ -1.05
CASP4-204ENST00000524843 SHISA4Q96DD7 197 aa8.5□□□□□ -1.05
CASP4-204ENST00000524843 CEP95Q96GE4 821 aa8.5□□□□□ -1.05
CASP4-204ENST00000524843 PSMD1Q99460 953 aa8.5□□□□□ -1.05
CASP4-204ENST00000524843 GTPBP4Q9BZE4 634 aaKnown RBP8.5□□□□□ -1.05
CASP4-204ENST00000524843 ZMYND12Q9H0C1 365 aa8.5□□□□□ -1.05
CASP4-204ENST00000524843 RIOX1Q9H6W3 641 aa8.5□□□□□ -1.05
CASP4-204ENST00000524843 C6orf50Q9HD87 102 aa8.5□□□□□ -1.05
CASP4-204ENST00000524843 USP40Q9NVE5 1235 aa8.5□□□□□ -1.05
CASP4-204ENST00000524843 MTMR4Q9NYA4 1195 aa8.5□□□□□ -1.05
CASP4-204ENST00000524843 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.5□□□□□ -1.05
CASP4-204ENST00000524843 M0R2N6 131 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 ACTN4O43707 911 aaKnown RBP8.49□□□□□ -1.05
CASP4-204ENST00000524843 NRDCO43847 1150 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 MYL1P05976 194 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 HOXA7P31268 230 aaPredicted RBP8.49□□□□□ -1.05
CASP4-204ENST00000524843 MYL5Q02045 173 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 PICALMQ13492 652 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 DPCR1Q3MIW9 517 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 WWC2Q6AWC2 1192 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 MCTP2Q6DN12 878 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 APOBEC3HQ6NTF7 200 aaKnown RBP8.49□□□□□ -1.05
CASP4-204ENST00000524843 PIK3AP1Q6ZUJ8 805 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 HEATR3Q7Z4Q2 680 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 METTL16Q86W50 562 aaKnown RBP8.49□□□□□ -1.05
CASP4-204ENST00000524843 MLKLQ8NB16 471 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 C7orf43Q8WVR3 580 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 SMARCE1Q969G3 411 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 AK8Q96MA6 479 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 CLIC6Q96NY7 704 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 NAP1L4Q99733 375 aaKnown RBP8.49□□□□□ -1.05
CASP4-204ENST00000524843 CUEDC2Q9H467 287 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 TMOD2Q9NZR1 351 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 IMPACTQ9P2X3 320 aa8.49□□□□□ -1.05
CASP4-204ENST00000524843 OFD1O75665 1012 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 SLFN14P0C7P3 912 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 PDHBP11177 359 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 SHMT1P34896 483 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 NAPAP54920 295 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 NONOQ15233 471 aaKnown RBP eCLIP8.48□□□□□ -1.05
CASP4-204ENST00000524843 DOK7Q18PE1 504 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 DRC7Q8IY82 874 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 STAG2Q8N3U4 1231 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 CCDC150Q8NCX0 1101 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 SPATA20Q8TB22 786 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 DCAF4Q8WV16 495 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 TMEM106CQ9BVX2 250 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 TRIM34Q9BYJ4 488 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 CSRNP2Q9H175 543 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 DBNDD1Q9H9R9 158 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 DDX4Q9NQI0 724 aaKnown RBP8.48□□□□□ -1.05
CASP4-204ENST00000524843 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.48□□□□□ -1.05
CASP4-204ENST00000524843 NYAP2Q9P242 653 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 PI4KBQ9UBF8 816 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 CLIP2Q9UDT6 1046 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 HDAC9Q9UKV0 1011 aa8.48□□□□□ -1.05
CASP4-204ENST00000524843 BRCA1P38398 1863 aaKnown RBP8.47□□□□□ -1.05
CASP4-204ENST00000524843 BAZ2BQ9UIF8 2168 aaKnown RBP8.47□□□□□ -1.05
CASP4-204ENST00000524843 F8W031 263 aaPredicted RBP8.47□□□□□ -1.05
CASP4-204ENST00000524843 POLR2DO15514 142 aaKnown RBP8.47□□□□□ -1.05
CASP4-204ENST00000524843 AP5Z1O43299 807 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 PPIP5K2O43314 1243 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 SLC26A4O43511 780 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 CYTH3O43739 400 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 AKR1B1P15121 316 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 ERCC5P28715 1186 aaPredicted RBP8.47□□□□□ -1.05
CASP4-204ENST00000524843 SARSP49591 514 aaKnown RBP8.47□□□□□ -1.05
CASP4-204ENST00000524843 MDM2Q00987 491 aaPredicted RBP8.47□□□□□ -1.05
CASP4-204ENST00000524843 ZNF543Q08ER8 600 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 TRAF1Q13077 416 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 PTGDRQ13258 359 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 PNOCQ13519 176 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 MORC3Q14149 939 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 EZH2Q15910 746 aaKnown RBP8.47□□□□□ -1.05
CASP4-204ENST00000524843 SLC4A8Q2Y0W8 1093 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 FKBP1CQ5VVH2 108 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 TMEM179Q6ZVK1 233 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 SH3RF1Q7Z6J0 888 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 FOXP4Q8IVH2 680 aaPredicted RBP8.47□□□□□ -1.05
CASP4-204ENST00000524843 REXO1Q8N1G1 1221 aaKnown RBP8.47□□□□□ -1.05
CASP4-204ENST00000524843 TTLL6Q8N841 843 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 IQUBQ8NA54 791 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 SYMPKQ92797 1274 aaKnown RBP8.47□□□□□ -1.05
CASP4-204ENST00000524843 GPKOWQ92917 476 aaPredicted RBP eCLIP8.47□□□□□ -1.05
CASP4-204ENST00000524843 GSDMAQ96QA5 445 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 KANSL2Q9H9L4 492 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 SPTLC3Q9NUV7 552 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 RMND1Q9NWS8 449 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 SERTAD1Q9UHV2 236 aa8.47□□□□□ -1.05
CASP4-204ENST00000524843 HERC5Q9UII4 1024 aaKnown RBP8.47□□□□□ -1.05
CASP4-204ENST00000524843 PNMA6FA0A0J9YX94 578 aa8.46□□□□□ -1.06
CASP4-204ENST00000524843 hCG_1642624A0A1W2PR95 340 aa8.46□□□□□ -1.06
CASP4-204ENST00000524843 FAM205CA6NFA0 338 aa8.46□□□□□ -1.06
CASP4-204ENST00000524843 GALR2O43603 387 aaPredicted RBP8.46□□□□□ -1.06
CASP4-204ENST00000524843 GTPBP6O43824 516 aaPredicted RBP8.46□□□□□ -1.06
CASP4-204ENST00000524843 ATP2B1P20020 1258 aa8.46□□□□□ -1.06
CASP4-204ENST00000524843 PPP1R2P41236 205 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms