RNA–Protein interactions for RNA: ENST00000524784.1

PACS1-202, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-202ENST00000524784 SLC10A4Q96EP9 437 aa12.21□□□□□ -0.45
PACS1-202ENST00000524784 PIGSQ96S52 555 aa12.21□□□□□ -0.45
PACS1-202ENST00000524784 ELP3Q9H9T3 547 aa12.21□□□□□ -0.45
PACS1-202ENST00000524784 JMJD4Q9H9V9 463 aa12.21□□□□□ -0.45
PACS1-202ENST00000524784 GBA2Q9HCG7 927 aaPredicted RBP12.21□□□□□ -0.45
PACS1-202ENST00000524784 BRMS1Q9HCU9 246 aa12.21□□□□□ -0.45
PACS1-202ENST00000524784 VPS54Q9P1Q0 977 aa12.21□□□□□ -0.45
PACS1-202ENST00000524784 AFG3L2Q9Y4W6 797 aa12.21□□□□□ -0.45
PACS1-202ENST00000524784 hCG_1984214I3L0E3 225 aa12.2□□□□□ -0.46
PACS1-202ENST00000524784 ZBTB5O15062 677 aa12.2□□□□□ -0.46
PACS1-202ENST00000524784 PLA2G6O60733 806 aa12.2□□□□□ -0.46
PACS1-202ENST00000524784 CELF2O95319 508 aaKnown RBP12.2□□□□□ -0.46
PACS1-202ENST00000524784 CALML3P27482 149 aa12.2□□□□□ -0.46
PACS1-202ENST00000524784 TRAF1Q13077 416 aa12.2□□□□□ -0.46
PACS1-202ENST00000524784 SLC35G1Q2M3R5 365 aa12.2□□□□□ -0.46
PACS1-202ENST00000524784 KIAA1755Q5JYT7 1200 aa12.2□□□□□ -0.46
PACS1-202ENST00000524784 LDLRAD1Q5T700 205 aa12.2□□□□□ -0.46
PACS1-202ENST00000524784 FERMT3Q86UX7 667 aa12.2□□□□□ -0.46
PACS1-202ENST00000524784 ZNF713Q8N859 430 aaPredicted RBP12.2□□□□□ -0.46
PACS1-202ENST00000524784 EMILIN3Q9NT22 766 aa12.2□□□□□ -0.46
PACS1-202ENST00000524784 GJB4Q9NTQ9 266 aa12.2□□□□□ -0.46
PACS1-202ENST00000524784 KCNJ14Q9UNX9 436 aa12.2□□□□□ -0.46
PACS1-202ENST00000524784 DOCK1Q14185 1865 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 SPDYE5A6NIY4 337 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 GOLGA6L22H0YM25 854 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 CXCL11O14625 94 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 MMP1P03956 469 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 HMGCS2P54868 508 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 CDC37Q16543 378 aaPredicted RBP12.19□□□□□ -0.46
PACS1-202ENST00000524784 GALNT17Q6IS24 598 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 GPKOWQ92917 476 aaPredicted RBP eCLIP12.19□□□□□ -0.46
PACS1-202ENST00000524784 KIFC2Q96AC6 838 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 MTMR8Q96EF0 704 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 CLMNQ96JQ2 1002 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 C12orf42Q96LP6 360 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 TANGO6Q9C0B7 1094 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 RPAP3Q9H6T3 665 aaPredicted RBP12.19□□□□□ -0.46
PACS1-202ENST00000524784 BARHL2Q9NY43 387 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 PRR12Q9ULL5 1215 aa12.19□□□□□ -0.46
PACS1-202ENST00000524784 CTDP1Q9Y5B0 961 aaPredicted RBP12.19□□□□□ -0.46
PACS1-202ENST00000524784 ATAD5Q96QE3 1844 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 STXBP3O00186 592 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 FLOT1O75955 427 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 BAG4O95429 457 aaKnown RBP12.18□□□□□ -0.46
PACS1-202ENST00000524784 ITGBL1O95965 494 aaPredicted RBP12.18□□□□□ -0.46
PACS1-202ENST00000524784 VCAM1P19320 739 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 GNA11P29992 359 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 KRT2P35908 639 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 NAPAP54920 295 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 FMR1Q06787 632 aaKnown RBP eCLIP12.18□□□□□ -0.46
PACS1-202ENST00000524784 RESTQ13127 1097 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 PPIL2Q13356 520 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 QRICH1Q2TAL8 776 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 FOXD4L6Q3SYB3 417 aaPredicted RBP12.18□□□□□ -0.46
PACS1-202ENST00000524784 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 WWC2Q6AWC2 1192 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 SAMD1Q6SPF0 538 aaPredicted RBP12.18□□□□□ -0.46
PACS1-202ENST00000524784 FOXD4L3Q6VB84 417 aaPredicted RBP12.18□□□□□ -0.46
PACS1-202ENST00000524784 CLEC17AQ6ZS10 378 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 BRAPQ7Z569 592 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 DIS3L2Q8IYB7 885 aaKnown RBP12.18□□□□□ -0.46
PACS1-202ENST00000524784 PRPF38AQ8NAV1 312 aaKnown RBP12.18□□□□□ -0.46
PACS1-202ENST00000524784 OPTNQ96CV9 577 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 ZNF396Q96N95 335 aaPredicted RBP12.18□□□□□ -0.46
PACS1-202ENST00000524784 SLF1Q9BQI6 1058 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 PHF20Q9BVI0 1012 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 AMNQ9BXJ7 453 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 FOXP1Q9H334 677 aaPredicted RBP12.18□□□□□ -0.46
PACS1-202ENST00000524784 C6orf50Q9HD87 102 aa12.18□□□□□ -0.46
PACS1-202ENST00000524784 SMCO2A6NFE2 343 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 BTBD18B2RXH4 712 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 USP17L15C9J2P7 530 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 USP17L13C9JLJ4 530 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 USP17L11C9JVI0 530 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 USP17L18D6R9N7 530 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 USP17L22D6RA61 530 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 USP17L17D6RBQ6 530 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 USP17L19D6RCP7 530 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 USP17L20D6RJB6 530 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 FDX1P10109 184 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 NCLP19338 710 aaKnown RBP12.17□□□□□ -0.46
PACS1-202ENST00000524784 KIF23Q02241 960 aaPredicted RBP12.17□□□□□ -0.46
PACS1-202ENST00000524784 USP17L24Q0WX57 530 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 CSPP1Q1MSJ5 1256 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 PPP1R18Q6NYC8 613 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 FASTKD5Q7L8L6 764 aaKnown RBP12.17□□□□□ -0.46
PACS1-202ENST00000524784 FBXO11Q86XK2 927 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 SMC1BQ8NDV3 1235 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 CFAP45Q9UL16 551 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 PNMA2Q9UL42 364 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 PCDHA4Q9UN74 947 aa12.17□□□□□ -0.46
PACS1-202ENST00000524784 ESYT2A0FGR8 921 aa12.16□□□□□ -0.46
PACS1-202ENST00000524784 IRF6O14896 467 aa12.16□□□□□ -0.46
PACS1-202ENST00000524784 ZBED4O75132 1171 aa12.16□□□□□ -0.46
PACS1-202ENST00000524784 U2AF2P26368 475 aaKnown RBP eCLIP12.16□□□□□ -0.46
PACS1-202ENST00000524784 MRPL12P52815 198 aaKnown RBP12.16□□□□□ -0.46
PACS1-202ENST00000524784 KRT85P78386 507 aa12.16□□□□□ -0.46
PACS1-202ENST00000524784 DGKZQ13574 1117 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms