RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 SYNRGQ9UMZ2 1314 aa15.28■□□□□ 0.04
SF3B2-203ENST00000524627 SLC4A3P48751 1232 aa15.28■□□□□ 0.04
SF3B2-203ENST00000524627 FPGSQ05932 587 aa15.28■□□□□ 0.04
SF3B2-203ENST00000524627 FAAP100Q0VG06 881 aa15.28■□□□□ 0.04
SF3B2-203ENST00000524627 ZSCAN25Q6NSZ9 544 aa15.28■□□□□ 0.04
SF3B2-203ENST00000524627 DDX11Q96FC9 970 aa15.28■□□□□ 0.04
SF3B2-203ENST00000524627 TSEN34Q9BSV6 310 aaKnown RBP15.28■□□□□ 0.04
SF3B2-203ENST00000524627 TEX13BQ9BXU2 312 aa15.28■□□□□ 0.04
SF3B2-203ENST00000524627 ARPP21Q9UBL0 812 aaPredicted RBP15.28■□□□□ 0.04
SF3B2-203ENST00000524627 ZHX1Q9UKY1 873 aaPredicted RBP15.28■□□□□ 0.04
SF3B2-203ENST00000524627 RIPK3Q9Y572 518 aa15.28■□□□□ 0.04
SF3B2-203ENST00000524627 SYNGAP1Q96PV0 1343 aa15.27■□□□□ 0.04
SF3B2-203ENST00000524627 DCDC2CA8MYV0 355 aa15.27■□□□□ 0.04
SF3B2-203ENST00000524627 SNAI1O95863 264 aaPredicted RBP15.27■□□□□ 0.04
SF3B2-203ENST00000524627 ACLYP53396 1101 aa15.27■□□□□ 0.04
SF3B2-203ENST00000524627 ANKRD33Q7Z3H0 272 aa15.27■□□□□ 0.04
SF3B2-203ENST00000524627 MSL3Q8N5Y2 521 aaKnown RBP15.27■□□□□ 0.04
SF3B2-203ENST00000524627 NUP133Q8WUM0 1156 aa15.27■□□□□ 0.04
SF3B2-203ENST00000524627 MKNK2Q9HBH9 465 aa15.27■□□□□ 0.04
SF3B2-203ENST00000524627 FAM184BQ9ULE4 1060 aa15.27■□□□□ 0.04
SF3B2-203ENST00000524627 GREB1LQ9C091 1923 aaPredicted RBP15.27■□□□□ 0.03
SF3B2-203ENST00000524627 TMEM265A0A087WTH1 108 aa15.26■□□□□ 0.03
SF3B2-203ENST00000524627 MYADML2A6NDP7 307 aa15.26■□□□□ 0.03
SF3B2-203ENST00000524627 F5H6K3 240 aa15.26■□□□□ 0.03
SF3B2-203ENST00000524627 NDUFB10O96000 172 aa15.26■□□□□ 0.03
SF3B2-203ENST00000524627 RASA1P20936 1047 aa15.26■□□□□ 0.03
SF3B2-203ENST00000524627 KLRC3Q07444 240 aa15.26■□□□□ 0.03
SF3B2-203ENST00000524627 KCNA10Q16322 511 aa15.26■□□□□ 0.03
SF3B2-203ENST00000524627 CPXCR1Q8N123 301 aa15.26■□□□□ 0.03
SF3B2-203ENST00000524627 KLHDC9Q8NEP7 349 aa15.26■□□□□ 0.03
SF3B2-203ENST00000524627 TOX2Q96NM4 488 aa15.26■□□□□ 0.03
SF3B2-203ENST00000524627 STRBPQ96SI9 672 aaKnown RBP15.26■□□□□ 0.03
SF3B2-203ENST00000524627 NYAP2Q9P242 653 aa15.26■□□□□ 0.03
SF3B2-203ENST00000524627 CTDP1Q9Y5B0 961 aaPredicted RBP15.26■□□□□ 0.03
SF3B2-203ENST00000524627 DNAJC25-GNG10A0A024R161 153 aa15.25■□□□□ 0.03
SF3B2-203ENST00000524627 MOXD2PA6NHM9 499 aa15.25■□□□□ 0.03
SF3B2-203ENST00000524627 MINDY4BA8MYZ0 360 aa15.25■□□□□ 0.03
SF3B2-203ENST00000524627 SMARCA5O60264 1052 aaPredicted RBP15.25■□□□□ 0.03
SF3B2-203ENST00000524627 DNAJB2P25686 324 aa15.25■□□□□ 0.03
SF3B2-203ENST00000524627 IRX5P78411 483 aaPredicted RBP15.25■□□□□ 0.03
SF3B2-203ENST00000524627 SBK1Q52WX2 424 aa15.25■□□□□ 0.03
SF3B2-203ENST00000524627 MAMDC4Q6UXC1 1216 aa15.25■□□□□ 0.03
SF3B2-203ENST00000524627 MIER1Q8N108 512 aa15.25■□□□□ 0.03
SF3B2-203ENST00000524627 PRPF38AQ8NAV1 312 aaKnown RBP15.25■□□□□ 0.03
SF3B2-203ENST00000524627 KIFC2Q96AC6 838 aa15.25■□□□□ 0.03
SF3B2-203ENST00000524627 LRRCC1Q9C099 1032 aa15.25■□□□□ 0.03
SF3B2-203ENST00000524627 RAVER2Q9HCJ3 691 aaKnown RBP15.25■□□□□ 0.03
SF3B2-203ENST00000524627 CLIP2Q9UDT6 1046 aa15.25■□□□□ 0.03
SF3B2-203ENST00000524627 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.24■□□□□ 0.03
SF3B2-203ENST00000524627 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.24■□□□□ 0.03
SF3B2-203ENST00000524627 GSG1L2A8MUP6 293 aa15.24■□□□□ 0.03
SF3B2-203ENST00000524627 ZBED4O75132 1171 aa15.24■□□□□ 0.03
SF3B2-203ENST00000524627 DUSP11O75319 330 aaKnown RBP15.24■□□□□ 0.03
SF3B2-203ENST00000524627 TIMP1P01033 207 aa15.24■□□□□ 0.03
SF3B2-203ENST00000524627 C6orf222P0C671 652 aaPredicted RBP15.24■□□□□ 0.03
SF3B2-203ENST00000524627 GRIN2CQ14957 1233 aa15.24■□□□□ 0.03
SF3B2-203ENST00000524627 CCSAPQ6IQ19 270 aaPredicted RBP15.24■□□□□ 0.03
SF3B2-203ENST00000524627 VTI1AQ96AJ9 217 aa15.24■□□□□ 0.03
SF3B2-203ENST00000524627 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.24■□□□□ 0.03
SF3B2-203ENST00000524627 TBX21Q9UL17 535 aa15.24■□□□□ 0.03
SF3B2-203ENST00000524627 MYH4Q9Y623 1939 aa15.23■□□□□ 0.03
SF3B2-203ENST00000524627 MROH7Q68CQ1 1323 aa15.23■□□□□ 0.03
SF3B2-203ENST00000524627 MUC3AQ02505 3323 aa15.23■□□□□ 0.03
SF3B2-203ENST00000524627 ATP2A1O14983 1001 aa15.23■□□□□ 0.03
SF3B2-203ENST00000524627 ADCY6O43306 1168 aa15.23■□□□□ 0.03
SF3B2-203ENST00000524627 ACVR2BQ13705 512 aa15.23■□□□□ 0.03
SF3B2-203ENST00000524627 ZNF467Q7Z7K2 595 aaPredicted RBP15.23■□□□□ 0.03
SF3B2-203ENST00000524627 ANKRD35Q8N283 1001 aa15.23■□□□□ 0.03
SF3B2-203ENST00000524627 OSBP2Q969R2 916 aa15.23■□□□□ 0.03
SF3B2-203ENST00000524627 GLT1D1Q96MS3 346 aa15.23■□□□□ 0.03
SF3B2-203ENST00000524627 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.23■□□□□ 0.034e-11■■□□□ 13.7
SF3B2-203ENST00000524627 CHMP4BQ9H444 224 aaKnown RBP15.23■□□□□ 0.03
SF3B2-203ENST00000524627 SPC25Q9HBM1 224 aa15.23■□□□□ 0.03
SF3B2-203ENST00000524627 MCM3APO60318 1980 aa15.23■□□□□ 0.03
SF3B2-203ENST00000524627 ELP1O95163 1332 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 IGKV6D-41A0A0C4DH26 115 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 PRDM1O75626 825 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 ASGR1P07306 291 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 CST5P28325 142 aaPredicted RBP15.22■□□□□ 0.03
SF3B2-203ENST00000524627 PPIGQ13427 754 aaKnown RBP eCLIP15.22■□□□□ 0.031e-7■■□□□ 13
SF3B2-203ENST00000524627 CCDC144BQ3MJ40 725 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 MFSD5Q6N075 450 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 GIMAP6Q6P9H5 292 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 LRRC47Q8N1G4 583 aaKnown RBP15.22■□□□□ 0.03
SF3B2-203ENST00000524627 USP38Q8NB14 1042 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 PCSK9Q8NBP7 692 aaKnown RBP15.22■□□□□ 0.03
SF3B2-203ENST00000524627 TIFAQ96CG3 184 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 CEP95Q96GE4 821 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 FGD4Q96M96 766 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 ABHD16BQ9H3Z7 469 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 ZNF576Q9H609 170 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 SLC38A10Q9HBR0 1119 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 EPB41L4AQ9HCS5 686 aaPredicted RBP15.22■□□□□ 0.03
SF3B2-203ENST00000524627 ECHDC1Q9NTX5 307 aa15.22■□□□□ 0.03
SF3B2-203ENST00000524627 TTC28Q96AY4 2481 aa15.21■□□□□ 0.03
SF3B2-203ENST00000524627 APPP05067 770 aa15.21■□□□□ 0.03
SF3B2-203ENST00000524627 TDO2P48775 406 aa15.21■□□□□ 0.03
SF3B2-203ENST00000524627 CDK7P50613 346 aa15.21■□□□□ 0.03
SF3B2-203ENST00000524627 GNASQ5JWF2 1037 aa15.21■□□□□ 0.03
SF3B2-203ENST00000524627 TSHZ3Q63HK5 1081 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms