RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 B4GALT4O60513 344 aa10.07□□□□□ -0.8
PUM1-213ENST00000524516 NPM3O75607 178 aaKnown RBP10.07□□□□□ -0.8
PUM1-213ENST00000524516 PGK2P07205 417 aa10.07□□□□□ -0.8
PUM1-213ENST00000524516 PTPROQ16827 1216 aa10.07□□□□□ -0.8
PUM1-213ENST00000524516 FBXO22Q8NEZ5 403 aa10.07□□□□□ -0.8
PUM1-213ENST00000524516 VWCEQ96DN2 955 aa10.07□□□□□ -0.8
PUM1-213ENST00000524516 MRPL38Q96DV4 380 aaKnown RBP10.07□□□□□ -0.8
PUM1-213ENST00000524516 PI4KBQ9UBF8 816 aa10.07□□□□□ -0.8
PUM1-213ENST00000524516 ABCF2Q9UG63 623 aa10.07□□□□□ -0.8
PUM1-213ENST00000524516 COL11A1P12107 1806 aaPredicted RBP10.07□□□□□ -0.8
PUM1-213ENST00000524516 SIP14410 1827 aa10.07□□□□□ -0.8
PUM1-213ENST00000524516 GRM8O00222 908 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 RHBDL3P58872 404 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 ERVK-21P61565 698 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 GNAI1P63096 354 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 FLIIQ13045 1269 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 MKRN4PQ13434 485 aaPredicted RBP10.06□□□□□ -0.8
PUM1-213ENST00000524516 ITGA7Q13683 1181 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 TCEAL5Q5H9L2 206 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 BANK1Q8NDB2 785 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 KCNG4Q8TDN1 519 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 AGBL1Q96MI9 1066 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 MMP19Q99542 508 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 HINFPQ9BQA5 517 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 SH2B1Q9NRF2 756 aaPredicted RBP10.06□□□□□ -0.8
PUM1-213ENST00000524516 IFT57Q9NWB7 429 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 C9orf78Q9NZ63 289 aaPredicted RBP10.06□□□□□ -0.8
PUM1-213ENST00000524516 DENND2AQ9ULE3 1009 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 DMXL1Q9Y485 3027 aa10.06□□□□□ -0.8
PUM1-213ENST00000524516 NCOR2Q9Y618 2525 aa10.05□□□□□ -0.8
PUM1-213ENST00000524516 MBTPS2O43462 519 aa10.05□□□□□ -0.8
PUM1-213ENST00000524516 HOXB3P14651 431 aaPredicted RBP10.05□□□□□ -0.8
PUM1-213ENST00000524516 FGFR2P21802 821 aa10.05□□□□□ -0.8
PUM1-213ENST00000524516 CXCL17Q6UXB2 119 aa10.05□□□□□ -0.8
PUM1-213ENST00000524516 RPAINQ86UA6 219 aa10.05□□□□□ -0.8
PUM1-213ENST00000524516 LPIN2Q92539 896 aa10.05□□□□□ -0.8
PUM1-213ENST00000524516 TANGO6Q9C0B7 1094 aa10.05□□□□□ -0.8
PUM1-213ENST00000524516 DHX36Q9H2U1 1008 aaKnown RBP10.05□□□□□ -0.8
PUM1-213ENST00000524516 CACNA1HO95180 2353 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 SCN5AQ14524 2016 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 RIF1Q5UIP0 2472 aaKnown RBP10.04□□□□□ -0.8
PUM1-213ENST00000524516 GPR75-ASB3A0A0A6YYF3 556 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 LINC01553A4QN01 128 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 BAIAP3O94812 1187 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 GH2P01242 217 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 ZNF853P0CG23 659 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 SMAD4Q13485 552 aaKnown RBP10.04□□□□□ -0.8
PUM1-213ENST00000524516 COG2Q14746 738 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 RAB3GAP1Q15042 981 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 SPTY2D1Q68D10 685 aaPredicted RBP10.04□□□□□ -0.8
PUM1-213ENST00000524516 TMCO2Q7Z6W1 182 aaPredicted RBP10.04□□□□□ -0.8
PUM1-213ENST00000524516 TEX11Q8IYF3 940 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 TSPYL6Q8N831 410 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 MB21D1Q8N884 522 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 ASIC4Q96FT7 647 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 FAM163AQ96GL9 167 aaPredicted RBP10.04□□□□□ -0.8
PUM1-213ENST00000524516 SIL1Q9H173 461 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 NSUN3Q9H649 340 aaKnown RBP10.04□□□□□ -0.8
PUM1-213ENST00000524516 HOXC10Q9NYD6 342 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 DIS3Q9Y2L1 958 aaKnown RBP10.04□□□□□ -0.8
PUM1-213ENST00000524516 VPS13AQ96RL7 3174 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 SIPA1L1O43166 1804 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 DNAH14Q0VDD8 3507 aa10.04□□□□□ -0.8
PUM1-213ENST00000524516 A0A1B0GUL7 405 aa10.03□□□□□ -0.8
PUM1-213ENST00000524516 CABYRO75952 493 aa10.03□□□□□ -0.8
PUM1-213ENST00000524516 RFC2P35250 354 aa10.03□□□□□ -0.8
PUM1-213ENST00000524516 GJA9P57773 515 aa10.03□□□□□ -0.8
PUM1-213ENST00000524516 BEX3Q00994 111 aa10.03□□□□□ -0.8
PUM1-213ENST00000524516 CALD1Q05682 793 aaKnown RBP10.03□□□□□ -0.8
PUM1-213ENST00000524516 ZNF792Q3KQV3 632 aa10.03□□□□□ -0.8
PUM1-213ENST00000524516 SLC43A3Q8NBI5 491 aa10.03□□□□□ -0.8
PUM1-213ENST00000524516 KIAA1683Q9H0B3 1180 aa10.03□□□□□ -0.8
PUM1-213ENST00000524516 UPF3AQ9H1J1 476 aaKnown RBP10.03□□□□□ -0.8
PUM1-213ENST00000524516 DNAJC18Q9H819 358 aa10.03□□□□□ -0.8
PUM1-213ENST00000524516 DLL3Q9NYJ7 618 aa10.03□□□□□ -0.8
PUM1-213ENST00000524516 TPRP12270 2363 aaKnown RBP10.03□□□□□ -0.8
PUM1-213ENST00000524516 PTPRSQ13332 1948 aa10.02□□□□□ -0.81
PUM1-213ENST00000524516 SEMA3EO15041 775 aa10.02□□□□□ -0.81
PUM1-213ENST00000524516 MAP4K4O95819 1239 aaPredicted RBP10.02□□□□□ -0.81
PUM1-213ENST00000524516 PDGFBP01127 241 aaPredicted RBP10.02□□□□□ -0.81
PUM1-213ENST00000524516 SUPT20HL2P0C7V6 817 aa10.02□□□□□ -0.81
PUM1-213ENST00000524516 CYP2C9P11712 490 aa10.02□□□□□ -0.81
PUM1-213ENST00000524516 NOL8Q76FK4 1167 aaKnown RBP10.02□□□□□ -0.81
PUM1-213ENST00000524516 SUCLG2Q96I99 432 aa10.02□□□□□ -0.81
PUM1-213ENST00000524516 RAD9AQ99638 391 aa10.02□□□□□ -0.81
PUM1-213ENST00000524516 NOL10Q9BSC4 688 aaKnown RBP10.02□□□□□ -0.81
PUM1-213ENST00000524516 C17orf80Q9BSJ5 609 aa10.02□□□□□ -0.81
PUM1-213ENST00000524516 SEZ6LQ9BYH1 1024 aa10.02□□□□□ -0.81
PUM1-213ENST00000524516 CHD6Q8TD26 2715 aa10.02□□□□□ -0.81
PUM1-213ENST00000524516 TNKSO95271 1327 aa10.02□□□□□ -0.81
PUM1-213ENST00000524516 CDK5RAP2Q96SN8 1893 aa10.02□□□□□ -0.81
PUM1-213ENST00000524516 ACACBO00763 2458 aa10.01□□□□□ -0.81
PUM1-213ENST00000524516 ZNFX1Q9P2E3 1918 aaKnown RBP10.01□□□□□ -0.81
PUM1-213ENST00000524516 ADCY6O43306 1168 aa10.01□□□□□ -0.81
PUM1-213ENST00000524516 NCK2O43639 380 aa10.01□□□□□ -0.81
PUM1-213ENST00000524516 SLC25A27O95847 323 aa10.01□□□□□ -0.81
PUM1-213ENST00000524516 WDR5P61964 334 aaKnown RBP10.01□□□□□ -0.81
PUM1-213ENST00000524516 MECOMQ03112 1051 aa10.01□□□□□ -0.81
PUM1-213ENST00000524516 ACVR2BQ13705 512 aa10.01□□□□□ -0.81
PUM1-213ENST00000524516 RSPO4Q2I0M5 234 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms