RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 KCNH4Q9UQ05 1017 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 MTMR6Q9Y217 621 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 AFG3L2Q9Y4W6 797 aa8.24□□□□□ -1.09
VPS11-201ENST00000524454 A0A0G2JLL6 359 aaPredicted RBP8.23□□□□□ -1.09
VPS11-201ENST00000524454 SH2B2O14492 632 aaPredicted RBP8.23□□□□□ -1.09
VPS11-201ENST00000524454 ORC4O43929 436 aa8.23□□□□□ -1.09
VPS11-201ENST00000524454 APPP05067 770 aa8.23□□□□□ -1.09
VPS11-201ENST00000524454 SLC3A2P08195 630 aaKnown RBP8.23□□□□□ -1.09
VPS11-201ENST00000524454 PDIA3P30101 505 aaKnown RBP8.23□□□□□ -1.09
VPS11-201ENST00000524454 TDO2P48775 406 aa8.23□□□□□ -1.09
VPS11-201ENST00000524454 SPP2Q13103 211 aa8.23□□□□□ -1.09
VPS11-201ENST00000524454 LARP1BQ659C4 914 aaKnown RBP8.23□□□□□ -1.09
VPS11-201ENST00000524454 MFSD6Q6ZSS7 791 aa8.23□□□□□ -1.09
VPS11-201ENST00000524454 PRRT2Q7Z6L0 340 aaPredicted RBP8.23□□□□□ -1.09
VPS11-201ENST00000524454 CTU1Q7Z7A3 348 aaKnown RBP8.23□□□□□ -1.09
VPS11-201ENST00000524454 STK11IPQ8N1F8 1099 aa8.23□□□□□ -1.09
VPS11-201ENST00000524454 NSUN7Q8NE18 718 aaKnown RBP8.23□□□□□ -1.09
VPS11-201ENST00000524454 CFHR5Q9BXR6 569 aa8.23□□□□□ -1.09
VPS11-201ENST00000524454 ARHGAP39Q9C0H5 1083 aa8.23□□□□□ -1.09
VPS11-201ENST00000524454 SCAND2PQ9GZW5 306 aaPredicted RBP8.23□□□□□ -1.09
VPS11-201ENST00000524454 ZFYVE28Q9HCC9 887 aa8.23□□□□□ -1.09
VPS11-201ENST00000524454 DCP1AQ9NPI6 582 aaPredicted RBP8.23□□□□□ -1.09
VPS11-201ENST00000524454 HERC5Q9UII4 1024 aaKnown RBP8.23□□□□□ -1.09
VPS11-201ENST00000524454 TRIM17Q9Y577 477 aa8.23□□□□□ -1.09
VPS11-201ENST00000524454 SLC4A4Q9Y6R1 1079 aa8.23□□□□□ -1.09
VPS11-201ENST00000524454 STK36Q9NRP7 1315 aa8.23□□□□□ -1.09
VPS11-201ENST00000524454 CCDC196A0A1B0GTZ2 297 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 FSD2A1L4K1 749 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 USP17L5A8MUK1 530 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 GH2P01242 217 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 NCLP19338 710 aaKnown RBP8.22□□□□□ -1.09
VPS11-201ENST00000524454 SHMT1P34896 483 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 PSEN2P49810 448 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 HMGCS2P54868 508 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 ANTXR2P58335 489 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 ZNF445P59923 1031 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 KRT85P78386 507 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 SP3Q02447 781 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 SCRN1Q12765 414 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 MTMR2Q13614 643 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 ZYXQ15942 572 aaKnown RBP8.22□□□□□ -1.09
VPS11-201ENST00000524454 TSR1Q2NL82 804 aaKnown RBP8.22□□□□□ -1.09
VPS11-201ENST00000524454 CCDC178Q5BJE1 867 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 MCTP1Q6DN14 999 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 NOL8Q76FK4 1167 aaKnown RBP8.22□□□□□ -1.09
VPS11-201ENST00000524454 ANKRD23Q86SG2 305 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 METTL16Q86W50 562 aaKnown RBP8.22□□□□□ -1.09
VPS11-201ENST00000524454 CLEC10AQ8IUN9 316 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 TBC1D10CQ8IV04 446 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 FOXP4Q8IVH2 680 aaPredicted RBP8.22□□□□□ -1.09
VPS11-201ENST00000524454 FAM177A1Q8N128 213 aaPredicted RBP8.22□□□□□ -1.09
VPS11-201ENST00000524454 ESR2Q92731 530 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 SERPINB13Q9UIV8 391 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 ZBTB21Q9ULJ3 1066 aa8.22□□□□□ -1.09
VPS11-201ENST00000524454 DDX49Q9Y6V7 483 aaKnown RBP8.22□□□□□ -1.09
VPS11-201ENST00000524454 ERICH2A1L162 156 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 PTPDC1A2A3K4 754 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 GOLGA8BA8MQT2 603 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 USP17L12C9JPN9 530 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 USP17L21D6R901 530 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 MPHOSPH10O00566 681 aaKnown RBP8.21□□□□□ -1.1
VPS11-201ENST00000524454 CXCL11O14625 94 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 PEX10O60683 326 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 LETM1O95202 739 aaPredicted RBP8.21□□□□□ -1.1
VPS11-201ENST00000524454 CTGFP29279 349 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 DEKP35659 375 aaKnown RBP8.21□□□□□ -1.1
VPS11-201ENST00000524454 PBX2P40425 430 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 UBE2HP62256 183 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 PPARAQ07869 468 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 DMRTA1Q5VZB9 504 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 APOA5Q6Q788 366 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 OTOP1Q7RTM1 612 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 TTC6Q86TZ1 520 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 AMOTL1Q8IY63 956 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 NECAB1Q8N987 351 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 FAM184AQ8NB25 1140 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 ZNF280CQ8ND82 737 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 IGDCC4Q8TDY8 1250 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 WASF1Q92558 559 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 KCNK17Q96T54 332 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 MAP3K14Q99558 947 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 CDHR5Q9HBB8 845 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 ZNF287Q9HBT7 754 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 CFAP45Q9UL16 551 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 HPS5Q9UPZ3 1129 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 ADGRA2Q96PE1 1338 aa8.21□□□□□ -1.1
VPS11-201ENST00000524454 KLF18A0A0U1RQI7 1052 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 TLR2O60603 784 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 ASNSP08243 561 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 CALM1P0DP23 149 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 CALM2P0DP24 149 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 CALM3P0DP25 149 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 COL9A1P20849 921 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 MRE11P49959 708 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 SOX10P56693 466 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 HAND2P61296 217 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 APOBRQ0VD83 1088 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 SEPT2Q15019 361 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 ABCB5Q2M3G0 1257 aa8.2□□□□□ -1.1
VPS11-201ENST00000524454 CERKLQ49MI3 558 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms