RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 CCDC40Q4G0X9 1142 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 CFAP58Q5T655 872 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 WLSQ5T9L3 541 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 PPP4R3AQ6IN85 833 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 POTEHQ6S545 545 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 TBC1D10CQ8IV04 446 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 IFNL2Q8IZJ0 200 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 CRACR2BQ8N4Y2 399 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 EIF1ADQ8N9N8 165 aaKnown RBP8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 WHAMMQ8TF30 809 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 NELFBQ8WX92 580 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 SYMPKQ92797 1274 aaKnown RBP8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 CCDC47Q96A33 483 aaKnown RBP8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 CAPZA3Q96KX2 299 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 CHP1Q99653 195 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 JPH2Q9BR39 696 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 RNF41Q9H4P4 317 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 RNF216Q9NWF9 866 aaPredicted RBP8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 TAB2Q9NYJ8 693 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 REXO2Q9Y3B8 237 aaKnown RBP8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 TJP1Q07157 1748 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 MYH13Q9UKX3 1938 aa8.4□□□□□ -1.06
HMBOX1-211ENST00000524238 NUP188Q5SRE5 1749 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 PPP1R37O75864 691 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 PARP1P09874 1014 aaKnown RBP8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 UQCRFS1P1P0C7P4 283 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 TATP17735 454 aaPredicted RBP8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 GNAT2P19087 354 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 HOXA7P31268 230 aaPredicted RBP8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 ZAP70P43403 619 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 MRPL12P52815 198 aaKnown RBP8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 GRIN1Q05586 938 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 SNCBQ16143 134 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 SKIDA1Q1XH10 827 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 NBPF9Q3BBW0 867 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 LRRC24Q50LG9 513 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 CEP85LQ5SZL2 805 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 C8orf74Q6P047 294 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 TMED8Q6PL24 325 aaPredicted RBP8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 CCDC121Q6ZUS5 278 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 SPATA4Q8NEY3 305 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 AIDAQ96BJ3 306 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 ZNF496Q96IT1 587 aaPredicted RBP8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 DCAF5Q96JK2 942 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 NACAP1Q9BZK3 213 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 CABP5Q9NP86 173 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 LUC7LQ9NQ29 371 aaKnown RBP8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 RBM28Q9NW13 759 aaKnown RBP8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 HDAC6Q9UBN7 1215 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 MCM8Q9UJA3 840 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 MYH6P13533 1939 aa8.4□□□□□ -1.07
HMBOX1-211ENST00000524238 SOS2Q07890 1332 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 COL22A1Q8NFW1 1626 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 BICDL2A1A5D9 508 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 PATL2C9JE40 543 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 PSMA7O14818 248 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 FAM107AO95990 144 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 SRGNP10124 158 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 GCFC2P16383 781 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 TRIM21P19474 475 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 LSP1P33241 339 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 ATP2C1P98194 919 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 C2orf54Q08AI8 447 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 FAM69CQ0P6D2 419 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 KCNB1Q14721 858 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 AKNAD1Q5T1N1 836 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 NAA35Q5VZE5 725 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 ARL6IP4Q66PJ3 421 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 LRIG3Q6UXM1 1119 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 MFSD6Q6ZSS7 791 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 THEMISQ8N1K5 641 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 ZNF507Q8TCN5 953 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 ZNF473Q8WTR7 871 aaKnown RBP8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 TBC1D22AQ8WUA7 517 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 ZKSCAN4Q969J2 545 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 NAPBQ9H115 298 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 NHEJ1Q9H9Q4 299 aaPredicted RBP8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 EXOC1Q9NV70 894 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 ODF2LQ9ULJ1 636 aa8.39□□□□□ -1.07
HMBOX1-211ENST00000524238 GRID2IPA4D2P6 1211 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 SRGAP2O75044 1071 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 RASSF9O75901 435 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 ABL1P00519 1130 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 GCP02774 474 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 TFRCP02786 760 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 RPN1P04843 607 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 CALM1P0DP23 149 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 CALM2P0DP24 149 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 CALM3P0DP25 149 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 MYBL2P10244 700 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 PHKG2P15735 406 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 RXRAP19793 462 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 NR1D1P20393 614 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 LONP1P36776 959 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 MDH1P40925 334 aaKnown RBP8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 SLC39A6Q13433 755 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 SLMAPQ14BN4 828 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 PTGISQ16647 500 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 CFAP221Q4G0U5 840 aa8.38□□□□□ -1.07
HMBOX1-211ENST00000524238 FKBP15Q5T1M5 1219 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms