RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 KRTAP10-2P60368 255 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 SNW1Q13573 536 aaKnown RBP3.93□□□□□ -1.78
LINC01339-204ENST00000524094 SF1Q15637 639 aaKnown RBP3.93□□□□□ -1.78
LINC01339-204ENST00000524094 PTPROQ16827 1216 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 NBPF9Q3BBW0 867 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 SGO2Q562F6 1265 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 DENND5AQ6IQ26 1287 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 ARMCX6Q7L4S7 300 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 CDH24Q86UP0 819 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 ARHGEF39Q8N4T4 335 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 APPBP2Q92624 585 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 SGSM3Q96HU1 749 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 Q96M66 194 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 HAUS7Q99871 368 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 PCDH12Q9NPG4 1184 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 PCOLCE2Q9UKZ9 415 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 CD2APQ9Y5K6 639 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 U3KQE9 123 aa3.93□□□□□ -1.78
LINC01339-204ENST00000524094 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.92□□□□□ -1.78
LINC01339-204ENST00000524094 BIN1O00499 593 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 DHX15O43143 795 aaKnown RBP3.92□□□□□ -1.78
LINC01339-204ENST00000524094 KCNQ2O43526 872 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 CDC45O75419 566 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 LEFTY1O75610 366 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 LRIG2O94898 1065 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 CD247P20963 164 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 YARSP54577 528 aaKnown RBP3.92□□□□□ -1.78
LINC01339-204ENST00000524094 IFRD2Q12894 506 aaPredicted RBP3.92□□□□□ -1.78
LINC01339-204ENST00000524094 TM4SF20Q53R12 229 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 EEPD1Q7L9B9 569 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 HOMER1Q86YM7 354 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 SHKBP1Q8TBC3 707 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 FBLIM1Q8WUP2 373 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 FGD4Q96M96 766 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 HEXIM2Q96MH2 286 aaKnown RBP3.92□□□□□ -1.78
LINC01339-204ENST00000524094 KREMEN1Q96MU8 473 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 MCMBPQ9BTE3 642 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 EPN3Q9H201 632 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 FAM86C1Q9NVL1 165 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 FAM53CQ9NYF3 392 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 AP4E1Q9UPM8 1137 aa3.92□□□□□ -1.78
LINC01339-204ENST00000524094 HMGXB3Q12766 1538 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 WIZO95785 1651 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 ANKRD34BA5PLL1 514 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 DLX3O60479 287 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 RNGTTO60942 597 aaKnown RBP3.91□□□□□ -1.78
LINC01339-204ENST00000524094 RFPL3O75679 317 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 ASMTLO95671 621 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 SDSP20132 328 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 ADMP35318 185 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 ZNF143P52747 638 aaPredicted RBP3.91□□□□□ -1.78
LINC01339-204ENST00000524094 ZNF445P59923 1031 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 PPP2R2AP63151 447 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 AUHQ13825 339 aaKnown RBP3.91□□□□□ -1.78
LINC01339-204ENST00000524094 MLECQ14165 292 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 NTRK3Q16288 839 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 HP1BP3Q5SSJ5 553 aaPredicted RBP3.91□□□□□ -1.78
LINC01339-204ENST00000524094 ANKRD34AQ69YU3 496 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 FILIP1Q7Z7B0 1213 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 VSIG10LQ86VR7 867 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 ZNF227Q86WZ6 799 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.91□□□□□ -1.78
LINC01339-204ENST00000524094 C7orf61Q8IZ16 206 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 MFSD2AQ8NA29 543 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 KCT2Q8NC54 265 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 KREMEN2Q8NCW0 462 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 XAGE3Q8WTP9 111 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 C1orf159Q96HA4 380 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 RCC1LQ96I51 464 aaKnown RBP3.91□□□□□ -1.78
LINC01339-204ENST00000524094 DHRS1Q96LJ7 313 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.91□□□□□ -1.78
LINC01339-204ENST00000524094 C7orf69Q9H7B7 122 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 LGR6Q9HBX8 967 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 GP6Q9HCN6 339 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 MINPP1Q9UNW1 487 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 EMC9Q9Y3B6 208 aa3.91□□□□□ -1.78
LINC01339-204ENST00000524094 TOP2AP11388 1531 aaKnown RBP3.9□□□□□ -1.78
LINC01339-204ENST00000524094 EIF4G1Q04637 1599 aaKnown RBP3.9□□□□□ -1.78
LINC01339-204ENST00000524094 A0A087WZG4 1122 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 PPM1GO15355 546 aaPredicted RBP3.9□□□□□ -1.79
LINC01339-204ENST00000524094 PRNPP04156 253 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 KCNA6P17658 529 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 HOXA5P20719 270 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 TMEM67Q5HYA8 995 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 LETMD1Q6P1Q0 360 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.9□□□□□ -1.79
LINC01339-204ENST00000524094 THNSL2Q86YJ6 484 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 JAMLQ86YT9 394 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 PHACTR4Q8IZ21 702 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 SLC7A14Q8TBB6 771 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 SCLYQ96I15 445 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 FEZ1Q99689 392 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 APBA2Q99767 749 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 DHRS4Q9BTZ2 278 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 PRDM14Q9GZV8 571 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 COL4A3BPQ9Y5P4 624 aa3.9□□□□□ -1.79
LINC01339-204ENST00000524094 ASXL2Q76L83 1435 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.89□□□□□ -1.79
LINC01339-204ENST00000524094 HMX2A2RU54 273 aa3.89□□□□□ -1.79
LINC01339-204ENST00000524094 GSG1L2A8MUP6 293 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms