RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 TRIP12Q14669 1992 aaPredicted RBP11.28□□□□□ -0.6
PTPN12-216ENST00000523952 COL4A4P53420 1690 aaPredicted RBP11.28□□□□□ -0.6
PTPN12-216ENST00000523952 MAGEB6P1A0A0J9YX57 407 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 A0A0U1RQG5 324 aaPredicted RBP11.28□□□□□ -0.6
PTPN12-216ENST00000523952 A0A1W2PRG0 241 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 WDR46O15213 610 aaKnown RBP11.28□□□□□ -0.6
PTPN12-216ENST00000523952 ADAMTS4O75173 837 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 FGBP02675 491 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 CT47B1P0C2W7 299 aaPredicted RBP11.28□□□□□ -0.6
PTPN12-216ENST00000523952 TAL1P17542 331 aaPredicted RBP11.28□□□□□ -0.6
PTPN12-216ENST00000523952 GUCY1A2P33402 732 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 ADGRE1Q14246 886 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 TMEM132BQ14DG7 1078 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 PPP2R2DQ66LE6 453 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 DDX11Q96FC9 970 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 ZNF512BQ96KM6 892 aaPredicted RBP11.28□□□□□ -0.6
PTPN12-216ENST00000523952 IL23AQ9NPF7 189 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 TBX21Q9UL17 535 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 CTDP1Q9Y5B0 961 aaPredicted RBP11.28□□□□□ -0.6
PTPN12-216ENST00000523952 ELP1O95163 1332 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 TRANK1O15050 2925 aa11.28□□□□□ -0.6
PTPN12-216ENST00000523952 PNMA6EA0A0J9YXQ4 647 aa11.27□□□□□ -0.61
PTPN12-216ENST00000523952 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
PTPN12-216ENST00000523952 ASGR1P07306 291 aa11.27□□□□□ -0.61
PTPN12-216ENST00000523952 ZNF865P0CJ78 1059 aaPredicted RBP11.27□□□□□ -0.61
PTPN12-216ENST00000523952 STAT3P40763 770 aa11.27□□□□□ -0.61
PTPN12-216ENST00000523952 SLC4A3P48751 1232 aa11.27□□□□□ -0.61
PTPN12-216ENST00000523952 ICA1Q05084 483 aa11.27□□□□□ -0.61
PTPN12-216ENST00000523952 TMED8Q6PL24 325 aaPredicted RBP11.27□□□□□ -0.61
PTPN12-216ENST00000523952 RIOX2Q8IUF8 465 aa11.27□□□□□ -0.61
PTPN12-216ENST00000523952 AMOTL1Q8IY63 956 aa11.27□□□□□ -0.61
PTPN12-216ENST00000523952 VCPKMTQ9H867 229 aa11.27□□□□□ -0.61
PTPN12-216ENST00000523952 ARIH1Q9Y4X5 557 aaPredicted RBP11.27□□□□□ -0.61
PTPN12-216ENST00000523952 TANC1Q9C0D5 1861 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 ZBBXA8MT70 800 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 ARVCFO00192 962 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 IPO8O15397 1037 aaKnown RBP11.26□□□□□ -0.61
PTPN12-216ENST00000523952 DUSP11O75319 330 aaKnown RBP11.26□□□□□ -0.61
PTPN12-216ENST00000523952 SURF6O75683 361 aaKnown RBP11.26□□□□□ -0.61
PTPN12-216ENST00000523952 TFF2Q03403 129 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 ZNF792Q3KQV3 632 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 GNASQ5JWF2 1037 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 TMEM31Q5JXX7 168 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 C16orf59Q7L2K0 433 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 OTOP2Q7RTS6 562 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
PTPN12-216ENST00000523952 HERVK_113Q902F9 699 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 CCDC8Q9H0W5 538 aaPredicted RBP11.26□□□□□ -0.61
PTPN12-216ENST00000523952 GOPCQ9HD26 462 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 SWAP70Q9UH65 585 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 SYNGAP1Q96PV0 1343 aa11.26□□□□□ -0.61
PTPN12-216ENST00000523952 BMP1P13497 986 aa11.25□□□□□ -0.61
PTPN12-216ENST00000523952 CYP2C18P33260 490 aa11.25□□□□□ -0.61
PTPN12-216ENST00000523952 KCNQ1P51787 676 aa11.25□□□□□ -0.61
PTPN12-216ENST00000523952 KIAA1755Q5JYT7 1200 aa11.25□□□□□ -0.61
PTPN12-216ENST00000523952 RASIP1Q5U651 963 aa11.25□□□□□ -0.61
PTPN12-216ENST00000523952 NOL8Q76FK4 1167 aaKnown RBP11.25□□□□□ -0.61
PTPN12-216ENST00000523952 KLHDC9Q8NEP7 349 aa11.25□□□□□ -0.61
PTPN12-216ENST00000523952 ARHGAP45Q92619 1136 aa11.25□□□□□ -0.61
PTPN12-216ENST00000523952 PHF12Q96QT6 1004 aa11.25□□□□□ -0.61
PTPN12-216ENST00000523952 LRFN3Q9BTN0 628 aa11.25□□□□□ -0.61
PTPN12-216ENST00000523952 HIPK3Q9H422 1215 aa11.25□□□□□ -0.61
PTPN12-216ENST00000523952 TMX2Q9Y320 296 aa11.25□□□□□ -0.61
PTPN12-216ENST00000523952 SLC4A7Q9Y6M7 1214 aa11.25□□□□□ -0.61
PTPN12-216ENST00000523952 GABPAQ06546 454 aa11.24□□□□□ -0.61
PTPN12-216ENST00000523952 TTF1Q15361 905 aaPredicted RBP11.24□□□□□ -0.61
PTPN12-216ENST00000523952 SNRNP48Q6IEG0 339 aaKnown RBP11.24□□□□□ -0.61
PTPN12-216ENST00000523952 CLEC10AQ8IUN9 316 aa11.24□□□□□ -0.61
PTPN12-216ENST00000523952 RPUSD2Q8IZ73 545 aaKnown RBP11.24□□□□□ -0.61
PTPN12-216ENST00000523952 FRAT1Q92837 279 aaPredicted RBP11.24□□□□□ -0.61
PTPN12-216ENST00000523952 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
PTPN12-216ENST00000523952 DBNLQ9UJU6 430 aaKnown RBP11.24□□□□□ -0.61
PTPN12-216ENST00000523952 YBX2Q9Y2T7 364 aaKnown RBP11.24□□□□□ -0.61
PTPN12-216ENST00000523952 PTPRSQ13332 1948 aa11.24□□□□□ -0.61
PTPN12-216ENST00000523952 CHD7Q9P2D1 2997 aa11.24□□□□□ -0.61
PTPN12-216ENST00000523952 SIP14410 1827 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 GREB1LQ9C091 1923 aaPredicted RBP11.23□□□□□ -0.61
PTPN12-216ENST00000523952 MYADML2A6NDP7 307 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 VWA5AO00534 786 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 CST5P28325 142 aaPredicted RBP11.23□□□□□ -0.61
PTPN12-216ENST00000523952 CDK7P50613 346 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 RABGGTBP53611 331 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 ACVR2BQ13705 512 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 SLC9C2Q5TAH2 1124 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 FAM126BQ8IXS8 530 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 ANKRD35Q8N283 1001 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 SDR42E1Q8WUS8 393 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 CCDC17Q96LX7 622 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 TEX13BQ9BXU2 312 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 ABHD16BQ9H3Z7 469 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 EPHX3Q9H6B9 360 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 FBXO28Q9NVF7 368 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 TLR7Q9NYK1 1049 aaKnown RBP11.23□□□□□ -0.61
PTPN12-216ENST00000523952 PPP1R9AQ9ULJ8 1098 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 COG5Q9UP83 839 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 PCDHA11Q9Y5I1 949 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 MUC6Q6W4X9 2439 aa11.23□□□□□ -0.61
PTPN12-216ENST00000523952 ERC2O15083 957 aa11.22□□□□□ -0.61
PTPN12-216ENST00000523952 BCAR3O75815 825 aa11.22□□□□□ -0.61
PTPN12-216ENST00000523952 SNAI1O95863 264 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms