RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 GBP2P32456 591 aaPredicted RBP7.31□□□□□ -1.24
SDC2-208ENST00000523877 STT3AP46977 705 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 CTCFP49711 727 aaPredicted RBP7.31□□□□□ -1.24
SDC2-208ENST00000523877 PDE6CP51160 858 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 CLCN2P51788 898 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 LIMK1P53667 647 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 GJA9P57773 515 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 DR1Q01658 176 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 PFKPQ01813 784 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 BNIP1Q12981 228 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 CBLBQ13191 982 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 LAPTM5Q13571 262 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 MRPL58Q14197 206 aaKnown RBP7.31□□□□□ -1.24
SDC2-208ENST00000523877 MAP7Q14244 749 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 LBRQ14739 615 aaKnown RBP7.31□□□□□ -1.24
SDC2-208ENST00000523877 PPP1R7Q15435 360 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 PROX2Q3B8N5 592 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 ESCO1Q5FWF5 840 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 THOC7Q6I9Y2 204 aaKnown RBP7.31□□□□□ -1.24
SDC2-208ENST00000523877 MZT2AQ6P582 158 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 MTHFD1LQ6UB35 978 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 BPHLQ86WA6 291 aaPredicted RBP7.31□□□□□ -1.24
SDC2-208ENST00000523877 TMEM151BQ8IW70 566 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 MFN1Q8IWA4 741 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 VPS52Q8N1B4 723 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 ENAHQ8N8S7 591 aaPredicted RBP7.31□□□□□ -1.24
SDC2-208ENST00000523877 TMEM87AQ8NBN3 555 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 CCDC148Q8NFR7 591 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 SGCDQ92629 289 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 TRMT2BQ96GJ1 504 aaKnown RBP7.31□□□□□ -1.24
SDC2-208ENST00000523877 CORO1BQ9BR76 489 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 TRIM4Q9C037 500 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 BRD9Q9H8M2 597 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 CYLDQ9NQC7 956 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 ATG3Q9NT62 314 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 POGKQ9P215 609 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 AFG3L2Q9Y4W6 797 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 PCDHGA10Q9Y5H3 936 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 MRFAP1Q9Y605 127 aa7.31□□□□□ -1.24
SDC2-208ENST00000523877 GAPVD1Q14C86 1478 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 SYNJ1O43426 1573 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 ARPC4-TTLL3A0A0A6YYG9 625 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 GOLGA6L9A6NEM1 432 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 BTBD11A6QL63 1104 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 TTC34A8MYJ7 566 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 MCF2LO15068 1137 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 CYTH3O43739 400 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 LZTS3O60299 673 aaPredicted RBP7.3□□□□□ -1.24
SDC2-208ENST00000523877 IVLP07476 585 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 HSPA8P11142 646 aaKnown RBP7.3□□□□□ -1.24
SDC2-208ENST00000523877 COL9A1P20849 921 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 ENDOUP21128 410 aaKnown RBP7.3□□□□□ -1.24
SDC2-208ENST00000523877 GCKP35557 465 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 MTHFRP42898 656 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 SLC4A3P48751 1232 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 GRM1Q13255 1194 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 PLCB4Q15147 1175 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 LRRC41Q15345 812 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 SHROOM1Q2M3G4 852 aaPredicted RBP7.3□□□□□ -1.24
SDC2-208ENST00000523877 SMUG1Q53HV7 270 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 CAVIN4Q5BKX8 364 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 TRIM68Q6AZZ1 485 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 FCRLBQ6BAA4 426 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 PHLDB3Q6NSJ2 640 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 ARHGAP22Q7Z5H3 698 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 MILR1Q7Z6M3 343 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 METTL3Q86U44 580 aaKnown RBP7.3□□□□□ -1.24
SDC2-208ENST00000523877 HOOK3Q86VS8 718 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.3□□□□□ -1.24
SDC2-208ENST00000523877 NUP133Q8WUM0 1156 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 SPIRE2Q8WWL2 714 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 JPH3Q8WXH2 748 aaPredicted RBP7.3□□□□□ -1.24
SDC2-208ENST00000523877 RNF34Q969K3 372 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 RBM18Q96H35 190 aaKnown RBP7.3□□□□□ -1.24
SDC2-208ENST00000523877 TRERF1Q96PN7 1200 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 CTAGE1Q96RT6 745 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 VCPKMTQ9H867 229 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 KCNQ5Q9NR82 932 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 AASDHPPTQ9NRN7 309 aa7.3□□□□□ -1.24
SDC2-208ENST00000523877 ARGLU1Q9NWB6 273 aaPredicted RBP7.3□□□□□ -1.24
SDC2-208ENST00000523877 MAPK8IP3Q9UPT6 1336 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 PTPRGP23470 1445 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 TARSL2A2RTX5 802 aaKnown RBP7.29□□□□□ -1.24
SDC2-208ENST00000523877 PALM3A6NDB9 673 aaPredicted RBP7.29□□□□□ -1.24
SDC2-208ENST00000523877 ENO4A6NNW6 628 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 PLOD2O00469 737 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 NDUFAB1O14561 156 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 ALDH1L1O75891 902 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 DDHD2O94830 711 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 APBB3O95704 486 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 CYP17A1P05093 508 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 IDO1P14902 403 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 HSD17B2P37059 387 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 FNTAP49354 379 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 MRPL12P52815 198 aaKnown RBP7.29□□□□□ -1.24
SDC2-208ENST00000523877 MAP2K5Q13163 448 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 CUL4BQ13620 913 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 DPYSQ14117 519 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 C15orf59Q2T9L4 293 aaPredicted RBP7.29□□□□□ -1.24
SDC2-208ENST00000523877 KRT71Q3SY84 523 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms