RNA–Protein interactions for RNA: ENST00000523824.5

NSMCE2-213, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-213ENST00000523824 IL27Q8NEV9 243 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 DDRGK1Q96HY6 314 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 PBX4Q9BYU1 374 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 BCL11AQ9H165 835 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 PRDM12Q9H4Q4 367 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 KANSL2Q9H9L4 492 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 SPC25Q9HBM1 224 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 THEGQ9P2T0 379 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 MSRAQ9UJ68 235 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 ZHX1Q9UKY1 873 aaPredicted RBP9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 TBX21Q9UL17 535 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 PPP1R9AQ9ULJ8 1098 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 ELP1O95163 1332 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 SYNGAP1Q96PV0 1343 aa9.56□□□□□ -0.88
NSMCE2-213ENST00000523824 ROBO3Q96MS0 1386 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 CYP2D7A0A087X1C5 515 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 TCRBV5S4A2TA0A5A2 114 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 GRXCR1A8MXD5 290 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 USP17L12C9JPN9 530 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 USP17L21D6R901 530 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 APBB1O00213 710 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 DUSP11O75319 330 aaKnown RBP9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 MBD4O95243 580 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 IFIT2P09913 472 aaKnown RBP9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 C6orf222P0C671 652 aaPredicted RBP9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 ACRP10323 421 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 CSF2RAP15509 400 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 IGFBP4P22692 258 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 CDK7P50613 346 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 MRPS5P82675 430 aaKnown RBP9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 CCDC85BQ15834 202 aaPredicted RBP9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 FAM83BQ5T0W9 1011 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 C12orf60Q5U649 245 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 CEP85Q6P2H3 762 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 PSRC1Q6PGN9 363 aaPredicted RBP9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 ZNF365Q70YC5 407 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 C16orf59Q7L2K0 433 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 CLASRPQ8N2M8 674 aaKnown RBP9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 RHPN1Q8TCX5 695 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 ASB2Q96Q27 587 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 ZNF214Q9UL59 606 aaPredicted RBP9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 SSUH2Q9Y2M2 353 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 CTDP1Q9Y5B0 961 aaPredicted RBP9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 A0A0G2JMZ2 1700 aa9.55□□□□□ -0.88
NSMCE2-213ENST00000523824 BDP1A6H8Y1 2624 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 MUC3AQ02505 3323 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 NAV1Q8NEY1 1877 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 A0A0U1RQG5 324 aaPredicted RBP9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 MYADML2A6NDP7 307 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 SMIM22K7EJ46 135 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 ARVCFO00192 962 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 TLR3O15455 904 aaKnown RBP9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 ZBED4O75132 1171 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 SNAI1O95863 264 aaPredicted RBP9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 ASGR1P07306 291 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 ACVR2BQ13705 512 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 RAB30Q15771 203 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 RASIP1Q5U651 963 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 SNRNP48Q6IEG0 339 aaKnown RBP9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 CCSAPQ6IQ19 270 aaPredicted RBP9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 MAMDC4Q6UXC1 1216 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 C16orf86Q6ZW13 317 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 REPS2Q8NFH8 660 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 ADAMTS19Q8TE59 1207 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 UHRF1Q96T88 793 aaPredicted RBP9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 SLF1Q9BQI6 1058 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 TEX13BQ9BXU2 312 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 PPP1R12CQ9BZL4 782 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 TSPYL2Q9H2G4 693 aaPredicted RBP9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 RAPGEFL1Q9UHV5 662 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 SMCHD1A6NHR9 2005 aa9.54□□□□□ -0.88
NSMCE2-213ENST00000523824 RLBP1P12271 317 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 CST5P28325 142 aaPredicted RBP9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 CYP2C18P33260 490 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 ADD2P35612 726 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 GJA9P57773 515 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 IRX5P78411 483 aaPredicted RBP9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 CCDC144BQ3MJ40 725 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 SLFNL1Q499Z3 407 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 GNASQ5JWF2 1037 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 ZNF467Q7Z7K2 595 aaPredicted RBP9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 CPXCR1Q8N123 301 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 ANKRD35Q8N283 1001 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 PRPF38AQ8NAV1 312 aaKnown RBP9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 NUP88Q99567 741 aaPredicted RBP9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 MTIF3Q9H2K0 278 aaKnown RBP9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 BOLA2Q9H3K6 86 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 ABHD16BQ9H3Z7 469 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 SLC28A3Q9HAS3 691 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 IL23AQ9NPF7 189 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 PAG1Q9NWQ8 432 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 RIPK3Q9Y572 518 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 SLC4A4Q9Y6R1 1079 aa9.53□□□□□ -0.88
NSMCE2-213ENST00000523824 ZNFX1Q9P2E3 1918 aaKnown RBP9.52□□□□□ -0.88
NSMCE2-213ENST00000523824 DNAJC25-GNG10A0A024R161 153 aa9.52□□□□□ -0.89
NSMCE2-213ENST00000523824 F5H6K3 240 aa9.52□□□□□ -0.89
NSMCE2-213ENST00000523824 FGBP02675 491 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms