RNA–Protein interactions for RNA: ENST00000523406.1

LINC00534-203, long intergenic non-protein coding RNA 534, humanhuman

TSL 3 BASIC

Gene LINC00534, Length 812 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-203ENST00000523406 WDR89Q96FK6 387 aaPredicted RBP8.14□□□□□ -1.11
LINC00534-203ENST00000523406 LRRC3Q9BY71 257 aa8.14□□□□□ -1.11
LINC00534-203ENST00000523406 API5Q9BZZ5 524 aaKnown RBP8.14□□□□□ -1.11
LINC00534-203ENST00000523406 RWDD1Q9H446 243 aaPredicted RBP8.14□□□□□ -1.11
LINC00534-203ENST00000523406 UBP1Q9NZI7 540 aa8.14□□□□□ -1.11
LINC00534-203ENST00000523406 TNNQ9UQP3 1299 aa8.14□□□□□ -1.11
LINC00534-203ENST00000523406 KIAA0232Q92628 1395 aa8.13□□□□□ -1.11
LINC00534-203ENST00000523406 SPATA31A3Q5VYP0 1347 aa8.13□□□□□ -1.11
LINC00534-203ENST00000523406 SYNGAP1Q96PV0 1343 aa8.13□□□□□ -1.11
LINC00534-203ENST00000523406 RGPD1P0DJD0 1748 aa8.13□□□□□ -1.11
LINC00534-203ENST00000523406 MEGF11A6BM72 1044 aa8.13□□□□□ -1.11
LINC00534-203ENST00000523406 SPATA31C1P0DKV0 1188 aa8.13□□□□□ -1.11
LINC00534-203ENST00000523406 LIG1P18858 919 aa8.13□□□□□ -1.11
LINC00534-203ENST00000523406 CRKP46108 304 aa8.13□□□□□ -1.11
LINC00534-203ENST00000523406 GNL2Q13823 731 aaKnown RBP8.13□□□□□ -1.11
LINC00534-203ENST00000523406 TAF7Q15545 349 aaPredicted RBP8.13□□□□□ -1.11
LINC00534-203ENST00000523406 EXOSC6Q5RKV6 272 aaKnown RBP8.13□□□□□ -1.11
LINC00534-203ENST00000523406 ZNF530Q6P9A1 599 aaPredicted RBP8.13□□□□□ -1.11
LINC00534-203ENST00000523406 KIAA1211Q6ZU35 1233 aa8.13□□□□□ -1.11
LINC00534-203ENST00000523406 GMLQ99445 158 aa8.13□□□□□ -1.11
LINC00534-203ENST00000523406 TMPRSS13Q9BYE2 586 aa8.13□□□□□ -1.11
LINC00534-203ENST00000523406 MRPL18Q9H0U6 180 aaKnown RBP8.13□□□□□ -1.11
LINC00534-203ENST00000523406 MIS18AQ9NYP9 233 aa8.13□□□□□ -1.11
LINC00534-203ENST00000523406 CRB1P82279 1406 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 TNS3Q68CZ2 1445 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 STRCP1A6NGW2 1772 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 KDM2BQ8NHM5 1336 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 MPP2Q14168 576 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 GRIK4Q16099 956 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 AKAP4Q5JQC9 854 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.12□□□□□ -1.11
LINC00534-203ENST00000523406 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.12□□□□□ -1.11
LINC00534-203ENST00000523406 TMEM57Q8N5G2 664 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 FBXO27Q8NI29 283 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 RAPGEF4Q8WZA2 1011 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 SPATA32Q96LK8 384 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 WDR18Q9BV38 432 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 BABAM1Q9NWV8 329 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 PCDHGC5Q9Y5F6 944 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 SLIT3O75094 1523 aa8.12□□□□□ -1.11
LINC00534-203ENST00000523406 AOC2O75106 756 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 RPL6Q02878 288 aaKnown RBP8.11□□□□□ -1.11
LINC00534-203ENST00000523406 TEFQ10587 303 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 CHRNA2Q15822 529 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 SHISA2Q6UWI4 295 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 ACAD11Q709F0 780 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 SLITRK4Q8IW52 837 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 TMEM130Q8N3G9 435 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 IL17REQ8NFR9 667 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 ACSBG1Q96GR2 724 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 RUSC1Q9BVN2 902 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 STK31Q9BXU1 1019 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 CHMP4AQ9BY43 222 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 PCDHA4Q9UN74 947 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 STRCQ7RTU9 1775 aa8.11□□□□□ -1.11
LINC00534-203ENST00000523406 MARF1Q9Y4F3 1742 aaKnown RBP8.11□□□□□ -1.11
LINC00534-203ENST00000523406 LTN1O94822 1766 aa8.1□□□□□ -1.11
LINC00534-203ENST00000523406 TRPM3Q9HCF6 1732 aaPredicted RBP8.1□□□□□ -1.11
LINC00534-203ENST00000523406 DLG5Q8TDM6 1919 aa8.1□□□□□ -1.11
LINC00534-203ENST00000523406 IGHDP01880 384 aa8.1□□□□□ -1.11
LINC00534-203ENST00000523406 ATF4P18848 351 aaPredicted RBP8.1□□□□□ -1.11
LINC00534-203ENST00000523406 CDK8P49336 464 aa8.1□□□□□ -1.11
LINC00534-203ENST00000523406 APOBRQ0VD83 1088 aa8.1□□□□□ -1.11
LINC00534-203ENST00000523406 KRT24Q2M2I5 525 aa8.1□□□□□ -1.11
LINC00534-203ENST00000523406 SREK1Q8WXA9 508 aaKnown RBP8.1□□□□□ -1.11
LINC00534-203ENST00000523406 LENG1Q96BZ8 264 aaPredicted RBP8.1□□□□□ -1.11
LINC00534-203ENST00000523406 RNF208Q9H0X6 261 aa8.1□□□□□ -1.11
LINC00534-203ENST00000523406 PRDM11Q9NQV5 511 aa8.1□□□□□ -1.11
LINC00534-203ENST00000523406 SOS1Q07889 1333 aaPredicted RBP8.09□□□□□ -1.11
LINC00534-203ENST00000523406 PXDNQ92626 1479 aa8.09□□□□□ -1.11
LINC00534-203ENST00000523406 F8W735 103 aaPredicted RBP8.09□□□□□ -1.11
LINC00534-203ENST00000523406 GFRA2O00451 464 aa8.09□□□□□ -1.11
LINC00534-203ENST00000523406 TLR3O15455 904 aaKnown RBP8.09□□□□□ -1.11
LINC00534-203ENST00000523406 RGS3P49796 1198 aa8.09□□□□□ -1.11
LINC00534-203ENST00000523406 INPP5AQ14642 412 aa8.09□□□□□ -1.11
LINC00534-203ENST00000523406 ZC3H12AQ5D1E8 599 aaKnown RBP8.09□□□□□ -1.11
LINC00534-203ENST00000523406 CCDC30Q5VVM6 783 aa8.09□□□□□ -1.11
LINC00534-203ENST00000523406 REC114Q7Z4M0 266 aa8.09□□□□□ -1.11
LINC00534-203ENST00000523406 VPS37DQ86XT2 251 aa8.09□□□□□ -1.11
LINC00534-203ENST00000523406 SMG8Q8ND04 991 aaKnown RBP8.09□□□□□ -1.11
LINC00534-203ENST00000523406 NKD1Q969G9 470 aa8.09□□□□□ -1.11
LINC00534-203ENST00000523406 SEC16BQ96JE7 1060 aa8.09□□□□□ -1.11
LINC00534-203ENST00000523406 SUGCTQ9HAC7 445 aa8.09□□□□□ -1.11
LINC00534-203ENST00000523406 SNCAIPQ9Y6H5 919 aa8.09□□□□□ -1.11
LINC00534-203ENST00000523406 PTPRCP08575 1304 aa8.08□□□□□ -1.12
LINC00534-203ENST00000523406 BTBD11A6QL63 1104 aa8.08□□□□□ -1.12
LINC00534-203ENST00000523406 RNMTO43148 476 aaKnown RBP8.08□□□□□ -1.12
LINC00534-203ENST00000523406 SLFN14P0C7P3 912 aa8.08□□□□□ -1.12
LINC00534-203ENST00000523406 SOX9P48436 509 aa8.08□□□□□ -1.12
LINC00534-203ENST00000523406 ARID5AQ03989 594 aa8.08□□□□□ -1.12
LINC00534-203ENST00000523406 COL9A2Q14055 689 aaPredicted RBP8.08□□□□□ -1.12
LINC00534-203ENST00000523406 CWF19L2Q2TBE0 894 aaKnown RBP8.08□□□□□ -1.12
LINC00534-203ENST00000523406 SEZ6Q53EL9 994 aa8.08□□□□□ -1.12
LINC00534-203ENST00000523406 LRFN4Q6PJG9 635 aa8.08□□□□□ -1.12
LINC00534-203ENST00000523406 ALYREFQ86V81 257 aaKnown RBP8.08□□□□□ -1.12
LINC00534-203ENST00000523406 PLPPR2Q96GM1 343 aa8.08□□□□□ -1.12
LINC00534-203ENST00000523406 LGR6Q9HBX8 967 aa8.08□□□□□ -1.12
LINC00534-203ENST00000523406 RAD18Q9NS91 495 aa8.08□□□□□ -1.12
LINC00534-203ENST00000523406 GINM1Q9NU53 330 aa8.08□□□□□ -1.12
LINC00534-203ENST00000523406 ZBTB40Q9NUA8 1239 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms