RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 TNNC1P63316 161 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 PPARAQ07869 468 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 SH2D3CQ8N5H7 860 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 MB21D1Q8N884 522 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 PLCD4Q9BRC7 762 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 VEZTQ9HBM0 779 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 FRMD3A2A2Y4 597 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 MOCS3O95396 460 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 GNAT2P19087 354 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 EVA1CP58658 441 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 AMPD3Q01432 767 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 CUL4BQ13620 913 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 E2F5Q15329 346 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 UBE3CQ15386 1083 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 SLC4A8Q2Y0W8 1093 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 ZNF658Q5TYW1 1059 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-212ENST00000523387 RRAGAQ7L523 313 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 TSG101Q99816 390 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 EHD4Q9H223 541 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 PLEKHG1Q9ULL1 1385 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 FAM205CA6NFA0 338 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 GCOM1H8Y6P7 765 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-212ENST00000523387 NEBLO76041 1014 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 ABL1P00519 1130 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 MYZAPP0CAP1 466 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 NR1D1P20393 614 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 FOXO4P98177 505 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 SF3B2Q13435 895 aaKnown RBP10.05□□□□□ -0.8
CSMD1-212ENST00000523387 ALS2CLQ60I27 953 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 N4BP2L2Q92802 583 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-212ENST00000523387 EPB41L5Q9HCM4 733 aa10.05□□□□□ -0.8
CSMD1-212ENST00000523387 SPATA31D1Q6ZQQ2 1576 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 TNKSO95271 1327 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 CHUKO15111 745 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 HEXIM1O94992 359 aaKnown RBP10.04□□□□□ -0.8
CSMD1-212ENST00000523387 PHKA1P46020 1223 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 SOGA3Q5TF21 947 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 EMBQ6PCB8 327 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 TRAPPC11Q7Z392 1133 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 RPAINQ86UA6 219 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.04□□□□□ -0.8
CSMD1-212ENST00000523387 DYDC1Q8WWB3 177 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 LRRC1Q9BTT6 524 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 STIM2Q9P246 746 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 BAIAP2L1Q9UHR4 511 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 ITIH6Q6UXX5 1313 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 STK36Q9NRP7 1315 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 TSPY2A6NKD2 308 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 MYO1FO00160 1098 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 MCAMP43121 646 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 ACTN3Q08043 901 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-212ENST00000523387 PIH1D3Q9NQM4 214 aaKnown RBP10.04□□□□□ -0.8
CSMD1-212ENST00000523387 JCADQ9P266 1359 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 ANO9A1A5B4 782 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 LGALS16A8MUM7 142 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 PSMD14O00487 310 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 EEF1GP26641 437 aaKnown RBP10.04□□□□□ -0.8
CSMD1-212ENST00000523387 CALML3P27482 149 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 KIF5BP33176 963 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 SNCBQ16143 134 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 PROSER2Q86WR7 435 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-212ENST00000523387 SMCR8Q8TEV9 937 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-212ENST00000523387 CALML4Q96GE6 196 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 RSRC1Q96IZ7 334 aaKnown RBP10.04□□□□□ -0.8
CSMD1-212ENST00000523387 ORAI2Q96SN7 254 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 STRN4Q9NRL3 753 aa10.04□□□□□ -0.8
CSMD1-212ENST00000523387 LIMA1Q9UHB6 759 aaKnown RBP10.04□□□□□ -0.8
CSMD1-212ENST00000523387 PRKAB2O43741 272 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 STARD3NLO95772 234 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 SYF2O95926 243 aaKnown RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 KRT18P05783 430 aaKnown RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 CALM1P0DP23 149 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 CALM2P0DP24 149 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 CALM3P0DP25 149 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 IGHMBP2P38935 993 aaKnown RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 ZBED6P86452 979 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 PRPF4BQ13523 1007 aaKnown RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 PNMA8AQ86V59 439 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 TEX2Q8IWB9 1127 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 SUGP1Q8IWZ8 645 aaKnown RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 SELENOSQ9BQE4 189 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 NFU1Q9UMS0 254 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 TLDC2A0PJX2 215 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 SMIM23A6NLE4 172 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 PRCPP42785 496 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 TOB1P50616 345 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 GUCY1A3Q02108 690 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 CCDC170Q8IYT3 715 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 RNF26Q9BY78 433 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 MLXIPQ9HAP2 919 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 RBM28Q9NW13 759 aaKnown RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 CEP83Q9Y592 693 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 TECPR2O15040 1411 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 ESYT3A0FGR9 886 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 IRS4O14654 1257 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 MEFVO15553 781 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 APBA1Q02410 837 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 MAP2K1Q02750 393 aaPredicted RBP10.03□□□□□ -0.8
CSMD1-212ENST00000523387 NFRKBQ6P4R8 1299 aa10.03□□□□□ -0.8
CSMD1-212ENST00000523387 SGMS1Q86VZ5 419 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms