RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 KIFC2Q96AC6 838 aa19.22■□□□□ 0.67
CLN8-206ENST00000523237 INCENPQ9NQS7 918 aa19.22■□□□□ 0.67
CLN8-206ENST00000523237 STX8Q9UNK0 236 aa19.22■□□□□ 0.67
CLN8-206ENST00000523237 HIP1O00291 1037 aa19.21■□□□□ 0.67
CLN8-206ENST00000523237 CEP290O15078 2479 aa19.21■□□□□ 0.67
CLN8-206ENST00000523237 FGRP09769 529 aa19.21■□□□□ 0.67
CLN8-206ENST00000523237 CYBAP13498 195 aa19.21■□□□□ 0.67
CLN8-206ENST00000523237 HABP4Q5JVS0 413 aaKnown RBP19.21■□□□□ 0.67
CLN8-206ENST00000523237 SNRNP48Q6IEG0 339 aaKnown RBP19.21■□□□□ 0.67
CLN8-206ENST00000523237 GMCL1Q96IK5 515 aa19.21■□□□□ 0.67
CLN8-206ENST00000523237 MAML3Q96JK9 1138 aa19.21■□□□□ 0.67
CLN8-206ENST00000523237 TOMM22Q9NS69 142 aa19.21■□□□□ 0.67
CLN8-206ENST00000523237 DIAPH3Q9NSV4 1193 aa19.21■□□□□ 0.67
CLN8-206ENST00000523237 DDX20Q9UHI6 824 aaKnown RBP19.21■□□□□ 0.67
CLN8-206ENST00000523237 ISY1Q9ULR0 285 aaKnown RBP19.21■□□□□ 0.67
CLN8-206ENST00000523237 ATP2A1O14983 1001 aa19.2■□□□□ 0.66
CLN8-206ENST00000523237 SLC1A4P43007 532 aa19.2■□□□□ 0.66
CLN8-206ENST00000523237 IRX6P78412 446 aaPredicted RBP19.2■□□□□ 0.66
CLN8-206ENST00000523237 SLC38A10Q9HBR0 1119 aa19.2■□□□□ 0.66
CLN8-206ENST00000523237 IL17RBQ9NRM6 502 aa19.2■□□□□ 0.66
CLN8-206ENST00000523237 COLQQ9Y215 455 aaPredicted RBP19.2■□□□□ 0.66
CLN8-206ENST00000523237 TACC3Q9Y6A5 838 aa19.2■□□□□ 0.66
CLN8-206ENST00000523237 LAMA4Q16363 1823 aa19.19■□□□□ 0.66
CLN8-206ENST00000523237 NMT2O60551 498 aa19.19■□□□□ 0.66
CLN8-206ENST00000523237 FDX1P10109 184 aa19.19■□□□□ 0.66
CLN8-206ENST00000523237 STAT2P52630 851 aa19.19■□□□□ 0.66
CLN8-206ENST00000523237 RRP12Q5JTH9 1297 aaKnown RBP19.19■□□□□ 0.66
CLN8-206ENST00000523237 CWC27Q6UX04 472 aaKnown RBP19.19■□□□□ 0.66
CLN8-206ENST00000523237 FAM160B2Q86V87 743 aa19.19■□□□□ 0.66
CLN8-206ENST00000523237 CPXCR1Q8N123 301 aa19.19■□□□□ 0.66
CLN8-206ENST00000523237 TRPV1Q8NER1 839 aa19.19■□□□□ 0.66
CLN8-206ENST00000523237 CHURC1Q8WUH1 139 aa19.19■□□□□ 0.66
CLN8-206ENST00000523237 DIS3Q9Y2L1 958 aaKnown RBP19.19■□□□□ 0.66
CLN8-206ENST00000523237 TMEM232C9JQI7 657 aa19.18■□□□□ 0.66
CLN8-206ENST00000523237 PGK2P07205 417 aa19.18■□□□□ 0.66
CLN8-206ENST00000523237 PCP11498 1178 aaKnown RBP19.18■□□□□ 0.66
CLN8-206ENST00000523237 MCCP23508 829 aa19.18■□□□□ 0.66
CLN8-206ENST00000523237 SLC4A3P48751 1232 aa19.18■□□□□ 0.66
CLN8-206ENST00000523237 OAZ1P54368 228 aa19.18■□□□□ 0.66
CLN8-206ENST00000523237 HAND2P61296 217 aa19.18■□□□□ 0.66
CLN8-206ENST00000523237 IKQ13123 557 aaPredicted RBP19.18■□□□□ 0.66
CLN8-206ENST00000523237 RAVER2Q9HCJ3 691 aaKnown RBP19.18■□□□□ 0.66
CLN8-206ENST00000523237 RIPK3Q9Y572 518 aa19.18■□□□□ 0.66
CLN8-206ENST00000523237 SEPT4O43236 478 aa19.17■□□□□ 0.66
CLN8-206ENST00000523237 NOVP48745 357 aa19.17■□□□□ 0.66
CLN8-206ENST00000523237 ZNF792Q3KQV3 632 aa19.17■□□□□ 0.66
CLN8-206ENST00000523237 AKNAD1Q5T1N1 836 aa19.17■□□□□ 0.66
CLN8-206ENST00000523237 CHRDL2Q6WN34 429 aa19.17■□□□□ 0.66
CLN8-206ENST00000523237 MFSD6Q6ZSS7 791 aa19.17■□□□□ 0.66
CLN8-206ENST00000523237 STAG1Q8WVM7 1258 aa19.17■□□□□ 0.66
CLN8-206ENST00000523237 DDX11Q96FC9 970 aa19.17■□□□□ 0.66
CLN8-206ENST00000523237 FBXO40Q9UH90 709 aa19.17■□□□□ 0.66
CLN8-206ENST00000523237 PFASO15067 1338 aa19.17■□□□□ 0.66
CLN8-206ENST00000523237 PLA2G6O60733 806 aa19.16■□□□□ 0.66
CLN8-206ENST00000523237 COL6A1P12109 1028 aa19.16■□□□□ 0.66
CLN8-206ENST00000523237 RCSD1Q6JBY9 416 aa19.16■□□□□ 0.66
CLN8-206ENST00000523237 C7orf61Q8IZ16 206 aa19.16■□□□□ 0.66
CLN8-206ENST00000523237 CHMP4CQ96CF2 233 aa19.16■□□□□ 0.66
CLN8-206ENST00000523237 RNF41Q9H4P4 317 aaPredicted RBP19.16■□□□□ 0.66
CLN8-206ENST00000523237 TCP11L1Q9NUJ3 509 aa19.16■□□□□ 0.66
CLN8-206ENST00000523237 NRBP1Q9UHY1 535 aa19.16■□□□□ 0.66
CLN8-206ENST00000523237 ZNF213O14771 459 aa19.15■□□□□ 0.66
CLN8-206ENST00000523237 PRAMEF19Q5SWL8 479 aa19.15■□□□□ 0.66
CLN8-206ENST00000523237 KCTD1Q719H9 257 aa19.15■□□□□ 0.66
CLN8-206ENST00000523237 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.15■□□□□ 0.66
CLN8-206ENST00000523237 CHST13Q8NET6 341 aa19.15■□□□□ 0.66
CLN8-206ENST00000523237 TINF2Q9BSI4 451 aa19.15■□□□□ 0.66
CLN8-206ENST00000523237 MTMR7Q9Y216 660 aa19.15■□□□□ 0.66
CLN8-206ENST00000523237 DNM1LO00429 736 aa19.14■□□□□ 0.65
CLN8-206ENST00000523237 TOP1P11387 765 aaKnown RBP19.14■□□□□ 0.65
CLN8-206ENST00000523237 PDE4AP27815 886 aa19.14■□□□□ 0.65
CLN8-206ENST00000523237 TTC22Q5TAA0 569 aa19.14■□□□□ 0.65
CLN8-206ENST00000523237 ARRDC4Q8NCT1 418 aa19.14■□□□□ 0.65
CLN8-206ENST00000523237 DCAF4Q8WV16 495 aa19.14■□□□□ 0.65
CLN8-206ENST00000523237 DSCC1Q9BVC3 393 aa19.14■□□□□ 0.65
CLN8-206ENST00000523237 SMCHD1A6NHR9 2005 aa19.13■□□□□ 0.65
CLN8-206ENST00000523237 DNAJC25-GNG10A0A024R161 153 aa19.13■□□□□ 0.65
CLN8-206ENST00000523237 NT5C2P49902 561 aa19.13■□□□□ 0.65
CLN8-206ENST00000523237 CCDC96Q2M329 555 aa19.13■□□□□ 0.65
CLN8-206ENST00000523237 ANO1Q5XXA6 986 aa19.13■□□□□ 0.65
CLN8-206ENST00000523237 TBC1D10CQ8IV04 446 aa19.13■□□□□ 0.65
CLN8-206ENST00000523237 ANKRD35Q8N283 1001 aa19.13■□□□□ 0.65
CLN8-206ENST00000523237 MSL3Q8N5Y2 521 aaKnown RBP19.13■□□□□ 0.65
CLN8-206ENST00000523237 ESR2Q92731 530 aa19.13■□□□□ 0.65
CLN8-206ENST00000523237 TMEM47Q9BQJ4 181 aa19.13■□□□□ 0.65
CLN8-206ENST00000523237 CNPY2Q9Y2B0 182 aa19.13■□□□□ 0.65
CLN8-206ENST00000523237 KBTBD13C9JR72 458 aa19.12■□□□□ 0.65
CLN8-206ENST00000523237 TTC14Q96N46 770 aa19.12■□□□□ 0.65
CLN8-206ENST00000523237 SENP6Q9GZR1 1112 aaPredicted RBP19.12■□□□□ 0.65
CLN8-206ENST00000523237 ACAD9Q9H845 621 aa19.12■□□□□ 0.65
CLN8-206ENST00000523237 HOMER2Q9NSB8 354 aa19.12■□□□□ 0.65
CLN8-206ENST00000523237 RBM27Q9P2N5 1060 aaKnown RBP19.12■□□□□ 0.65
CLN8-206ENST00000523237 CTNNA3Q9UI47 895 aa19.12■□□□□ 0.65
CLN8-206ENST00000523237 PRR12Q9ULL5 1215 aa19.12■□□□□ 0.65
CLN8-206ENST00000523237 ZNF536O15090 1300 aa19.11■□□□□ 0.65
CLN8-206ENST00000523237 NEDD4P46934 1319 aa19.11■□□□□ 0.65
CLN8-206ENST00000523237 SYNGAP1Q96PV0 1343 aa19.11■□□□□ 0.65
CLN8-206ENST00000523237 GSPT1P15170 499 aaKnown RBP19.11■□□□□ 0.65
CLN8-206ENST00000523237 IMMTQ16891 758 aaKnown RBP19.11■□□□□ 0.65
CLN8-206ENST00000523237 LRRC26Q2I0M4 334 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms