RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 PLXNA1Q9UIW2 1896 aa21.03■□□□□ 0.96
CLK4-211ENST00000522556 SLC16A2P36021 539 aa21.03■□□□□ 0.96
CLK4-211ENST00000522556 RIOX2Q8IUF8 465 aa21.03■□□□□ 0.96
CLK4-211ENST00000522556 CPXCR1Q8N123 301 aa21.03■□□□□ 0.96
CLK4-211ENST00000522556 ENAHQ8N8S7 591 aaPredicted RBP21.03■□□□□ 0.96
CLK4-211ENST00000522556 PRPF38AQ8NAV1 312 aaKnown RBP21.03■□□□□ 0.96
CLK4-211ENST00000522556 SHCBP1Q8NEM2 672 aa21.03■□□□□ 0.96
CLK4-211ENST00000522556 APBA2Q99767 749 aa21.03■□□□□ 0.96
CLK4-211ENST00000522556 FEM1BQ9UK73 627 aa21.03■□□□□ 0.96
CLK4-211ENST00000522556 TNKSO95271 1327 aa21.03■□□□□ 0.96
CLK4-211ENST00000522556 SLC15A5A6NIM6 579 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 E7EWF7 191 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 COBLO75128 1261 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 CDC45O75419 566 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 HMGCRP04035 888 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 PDHBP11177 359 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 ADORA2AP29274 412 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 STAT3P40763 770 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 RGS2P41220 211 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 SLC4A3P48751 1232 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 PPP4R3BQ5MIZ7 849 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 SNRNP48Q6IEG0 339 aaKnown RBP21.02■□□□□ 0.96
CLK4-211ENST00000522556 ZSCAN10Q96SZ4 725 aaPredicted RBP21.02■□□□□ 0.96
CLK4-211ENST00000522556 SLC38A10Q9HBR0 1119 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 SENP2Q9HC62 589 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 GPCPD1Q9NPB8 672 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 ANO2Q9NQ90 1003 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 IVNS1ABPQ9Y6Y0 642 aa21.02■□□□□ 0.96
CLK4-211ENST00000522556 ZNF536O15090 1300 aa21.02■□□□□ 0.95
CLK4-211ENST00000522556 STAT2P52630 851 aa21.01■□□□□ 0.95
CLK4-211ENST00000522556 IKQ13123 557 aaPredicted RBP21.01■□□□□ 0.95
CLK4-211ENST00000522556 CHST3Q7LGC8 479 aa21.01■□□□□ 0.95
CLK4-211ENST00000522556 DCAF4Q8WV16 495 aa21.01■□□□□ 0.95
CLK4-211ENST00000522556 TMEM106CQ9BVX2 250 aa21.01■□□□□ 0.95
CLK4-211ENST00000522556 KRT23Q9C075 422 aa21.01■□□□□ 0.95
CLK4-211ENST00000522556 RNF208Q9H0X6 261 aa21.01■□□□□ 0.95
CLK4-211ENST00000522556 CPVLQ9H3G5 476 aa21.01■□□□□ 0.95
CLK4-211ENST00000522556 PRR12Q9ULL5 1215 aa21.01■□□□□ 0.95
CLK4-211ENST00000522556 FRMPD3Q5JV73 1810 aa21■□□□□ 0.95
CLK4-211ENST00000522556 TNRC18O15417 2968 aaPredicted RBP21■□□□□ 0.95
CLK4-211ENST00000522556 GOLGA8HP0CJ92 632 aa21■□□□□ 0.95
CLK4-211ENST00000522556 XRCC5P13010 732 aaKnown RBP21■□□□□ 0.95
CLK4-211ENST00000522556 ZKSCAN1P17029 563 aaPredicted RBP21■□□□□ 0.95
CLK4-211ENST00000522556 ANTXR2P58335 489 aa21■□□□□ 0.95
CLK4-211ENST00000522556 UBXN2AP68543 259 aa21■□□□□ 0.95
CLK4-211ENST00000522556 SEC23AQ15436 765 aa21■□□□□ 0.95
CLK4-211ENST00000522556 TTC14Q96N46 770 aa21■□□□□ 0.95
CLK4-211ENST00000522556 TEX13BQ9BXU2 312 aa21■□□□□ 0.95
CLK4-211ENST00000522556 MROH8Q9H579 483 aa21■□□□□ 0.95
CLK4-211ENST00000522556 CNNM2Q9H8M5 875 aa21■□□□□ 0.95
CLK4-211ENST00000522556 SLC27A2O14975 620 aa20.99■□□□□ 0.95
CLK4-211ENST00000522556 PGK2P07205 417 aa20.99■□□□□ 0.95
CLK4-211ENST00000522556 SNHG28P0DPA3 235 aa20.99■□□□□ 0.95
CLK4-211ENST00000522556 PRKAR2AP13861 404 aaKnown RBP20.99■□□□□ 0.95
CLK4-211ENST00000522556 ZNF543Q08ER8 600 aa20.99■□□□□ 0.95
CLK4-211ENST00000522556 MAP3K21Q5TCX8 1036 aa20.99■□□□□ 0.95
CLK4-211ENST00000522556 KIAA1211Q6ZU35 1233 aa20.99■□□□□ 0.95
CLK4-211ENST00000522556 FAM160B2Q86V87 743 aa20.99■□□□□ 0.95
CLK4-211ENST00000522556 IQCA1Q86XH1 822 aa20.99■□□□□ 0.95
CLK4-211ENST00000522556 DGKHQ86XP1 1220 aa20.99■□□□□ 0.95
CLK4-211ENST00000522556 PNMA1Q8ND90 353 aa20.99■□□□□ 0.95
CLK4-211ENST00000522556 AGBL1Q96MI9 1066 aa20.99■□□□□ 0.95
CLK4-211ENST00000522556 MKI67P46013 3256 aaKnown RBP20.99■□□□□ 0.95
CLK4-211ENST00000522556 LCTP09848 1927 aa20.98■□□□□ 0.95
CLK4-211ENST00000522556 ZBED4O75132 1171 aa20.98■□□□□ 0.95
CLK4-211ENST00000522556 SLC25A27O95847 323 aa20.98■□□□□ 0.95
CLK4-211ENST00000522556 HOXC6P09630 235 aa20.98■□□□□ 0.95
CLK4-211ENST00000522556 MLLT1Q03111 559 aaPredicted RBP20.98■□□□□ 0.95
CLK4-211ENST00000522556 CACNB2Q08289 660 aaPredicted RBP20.98■□□□□ 0.95
CLK4-211ENST00000522556 CCDC174Q6PII3 467 aa20.98■□□□□ 0.95
CLK4-211ENST00000522556 MB21D2Q8IYB1 491 aaPredicted RBP20.98■□□□□ 0.95
CLK4-211ENST00000522556 ANKS1AQ92625 1134 aa20.98■□□□□ 0.95
CLK4-211ENST00000522556 MMP19Q99542 508 aa20.98■□□□□ 0.95
CLK4-211ENST00000522556 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.98■□□□□ 0.95
CLK4-211ENST00000522556 PAK6Q9NQU5 681 aaPredicted RBP20.98■□□□□ 0.95
CLK4-211ENST00000522556 GPHNQ9NQX3 736 aaPredicted RBP20.98■□□□□ 0.95
CLK4-211ENST00000522556 HOMER2Q9NSB8 354 aa20.98■□□□□ 0.95
CLK4-211ENST00000522556 ATP2A1O14983 1001 aa20.97■□□□□ 0.95
CLK4-211ENST00000522556 PLA2G6O60733 806 aa20.97■□□□□ 0.95
CLK4-211ENST00000522556 IGHA2P01877 340 aa20.97■□□□□ 0.95
CLK4-211ENST00000522556 CCND3P30281 292 aaPredicted RBP20.97■□□□□ 0.95
CLK4-211ENST00000522556 CYP2C19P33261 490 aa20.97■□□□□ 0.95
CLK4-211ENST00000522556 NECTIN1Q15223 517 aa20.97■□□□□ 0.95
CLK4-211ENST00000522556 ERICH6BQ5W0A0 696 aa20.97■□□□□ 0.95
CLK4-211ENST00000522556 CREB3L3Q68CJ9 461 aa20.97■□□□□ 0.95
CLK4-211ENST00000522556 CHURC1Q8WUH1 139 aa20.97■□□□□ 0.95
CLK4-211ENST00000522556 DEFB118Q96PH6 123 aa20.97■□□□□ 0.95
CLK4-211ENST00000522556 UBAC1Q9BSL1 405 aa20.97■□□□□ 0.95
CLK4-211ENST00000522556 GJB1P08034 283 aa20.96■□□□□ 0.95
CLK4-211ENST00000522556 FCER1AP12319 257 aa20.96■□□□□ 0.95
CLK4-211ENST00000522556 SYDE2Q5VT97 1194 aa20.96■□□□□ 0.95
CLK4-211ENST00000522556 BTNL9Q6UXG8 535 aa20.96■□□□□ 0.95
CLK4-211ENST00000522556 TRPV1Q8NER1 839 aa20.96■□□□□ 0.95
CLK4-211ENST00000522556 U2AF1L4Q8WU68 220 aaKnown RBP20.96■□□□□ 0.95
CLK4-211ENST00000522556 KAT14Q9H8E8 782 aa20.96■□□□□ 0.95
CLK4-211ENST00000522556 STRNO43815 780 aa20.95■□□□□ 0.94
CLK4-211ENST00000522556 GJA8P48165 433 aa20.95■□□□□ 0.94
CLK4-211ENST00000522556 RALYLQ86SE5 291 aaKnown RBP20.95■□□□□ 0.94
CLK4-211ENST00000522556 DPP9Q86TI2 863 aa20.95■□□□□ 0.94
CLK4-211ENST00000522556 NCOA7Q8NI08 942 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms