RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 ST3GAL1Q11201 340 aa28.1■■■□□ 2.09
PVT1-212ENST00000521951 IKQ13123 557 aaPredicted RBP28.1■■■□□ 2.09
PVT1-212ENST00000521951 NBPF11Q86T75 865 aa28.1■■■□□ 2.09
PVT1-212ENST00000521951 FAM160B2Q86V87 743 aa28.1■■■□□ 2.09
PVT1-212ENST00000521951 CMTR1Q8N1G2 835 aaKnown RBP28.1■■■□□ 2.09
PVT1-212ENST00000521951 SRBD1Q8N5C6 995 aaKnown RBP28.1■■■□□ 2.09
PVT1-212ENST00000521951 LZTS2Q9BRK4 669 aa28.1■■■□□ 2.09
PVT1-212ENST00000521951 K7ELQ4 463 aaPredicted RBP28.09■■■□□ 2.09
PVT1-212ENST00000521951 PDHXO00330 501 aa28.09■■■□□ 2.09
PVT1-212ENST00000521951 IGF2BP3O00425 579 aaKnown RBP eCLIP28.09■■■□□ 2.09
PVT1-212ENST00000521951 SLC35G1Q2M3R5 365 aa28.09■■■□□ 2.09
PVT1-212ENST00000521951 HSCBQ8IWL3 235 aa28.09■■■□□ 2.09
PVT1-212ENST00000521951 SLF1Q9BQI6 1058 aa28.09■■■□□ 2.09
PVT1-212ENST00000521951 SLC45A1Q9Y2W3 748 aa28.09■■■□□ 2.09
PVT1-212ENST00000521951 COG2Q14746 738 aa28.08■■■□□ 2.09
PVT1-212ENST00000521951 NTRK3Q16288 839 aa28.08■■■□□ 2.09
PVT1-212ENST00000521951 SAMD1Q6SPF0 538 aaPredicted RBP28.08■■■□□ 2.09
PVT1-212ENST00000521951 IFNL1Q8IU54 200 aa28.08■■■□□ 2.09
PVT1-212ENST00000521951 CCDC83Q8IWF9 413 aa28.08■■■□□ 2.09
PVT1-212ENST00000521951 ASCC2Q9H1I8 757 aaPredicted RBP28.08■■■□□ 2.09
PVT1-212ENST00000521951 OSBPP22059 807 aa28.08■■■□□ 2.08
PVT1-212ENST00000521951 IRX3P78415 501 aaPredicted RBP28.08■■■□□ 2.08
PVT1-212ENST00000521951 SYDE2Q5VT97 1194 aa28.08■■■□□ 2.08
PVT1-212ENST00000521951 CCDC82Q8N4S0 544 aa28.08■■■□□ 2.08
PVT1-212ENST00000521951 PRPF38AQ8NAV1 312 aaKnown RBP28.08■■■□□ 2.08
PVT1-212ENST00000521951 KIFC2Q96AC6 838 aa28.08■■■□□ 2.08
PVT1-212ENST00000521951 PPP1R9AQ9ULJ8 1098 aa28.08■■■□□ 2.08
PVT1-212ENST00000521951 PRR12Q9ULL5 1215 aa28.08■■■□□ 2.08
PVT1-212ENST00000521951 RBM19Q9Y4C8 960 aaKnown RBP28.08■■■□□ 2.08
PVT1-212ENST00000521951 CYTH3O43739 400 aa28.07■■■□□ 2.08
PVT1-212ENST00000521951 DHX16O60231 1041 aaKnown RBP28.07■■■□□ 2.08
PVT1-212ENST00000521951 SMARCA1P28370 1054 aa28.07■■■□□ 2.08
PVT1-212ENST00000521951 DSG3P32926 999 aa28.07■■■□□ 2.08
PVT1-212ENST00000521951 MAP2K2P36507 400 aa28.07■■■□□ 2.08
PVT1-212ENST00000521951 FUT2Q10981 343 aa28.07■■■□□ 2.08
PVT1-212ENST00000521951 ADGRF4Q8IZF3 695 aa28.07■■■□□ 2.08
PVT1-212ENST00000521951 P2RX7Q99572 595 aaKnown RBP28.07■■■□□ 2.08
PVT1-212ENST00000521951 RIOX1Q9H6W3 641 aa28.07■■■□□ 2.08
PVT1-212ENST00000521951 VAT1LQ9HCJ6 419 aa28.07■■■□□ 2.08
PVT1-212ENST00000521951 HOXC10Q9NYD6 342 aa28.07■■■□□ 2.08
PVT1-212ENST00000521951 CPLX1O14810 134 aa28.06■■■□□ 2.08
PVT1-212ENST00000521951 REM2Q8IYK8 340 aaPredicted RBP28.06■■■□□ 2.08
PVT1-212ENST00000521951 SPZ1Q9BXG8 430 aa28.06■■■□□ 2.08
PVT1-212ENST00000521951 IFNAR1P17181 557 aa28.05■■■□□ 2.08
PVT1-212ENST00000521951 OTUD7BQ6GQQ9 843 aa28.05■■■□□ 2.08
PVT1-212ENST00000521951 JMJD4Q9H9V9 463 aa28.05■■■□□ 2.08
PVT1-212ENST00000521951 ZCCHC17Q9NP64 241 aaKnown RBP28.05■■■□□ 2.08
PVT1-212ENST00000521951 PNMA3Q9UL41 463 aa28.05■■■□□ 2.08
PVT1-212ENST00000521951 MYPNQ86TC9 1320 aa28.05■■■□□ 2.08
PVT1-212ENST00000521951 SPDYE16A6NNV3 312 aaPredicted RBP28.04■■■□□ 2.08
PVT1-212ENST00000521951 CTDNEP1O95476 244 aa28.04■■■□□ 2.08
PVT1-212ENST00000521951 CPLX2Q6PUV4 134 aaKnown RBP28.04■■■□□ 2.08
PVT1-212ENST00000521951 ATG4CQ96DT6 458 aa28.04■■■□□ 2.08
PVT1-212ENST00000521951 CNTNAP5Q8WYK1 1306 aa28.04■■■□□ 2.08
PVT1-212ENST00000521951 DTNBO60941 627 aa28.03■■■□□ 2.08
PVT1-212ENST00000521951 CYP2C8P10632 490 aa28.03■■■□□ 2.08
PVT1-212ENST00000521951 ADAMTS5Q9UNA0 930 aa28.03■■■□□ 2.08
PVT1-212ENST00000521951 PPFIA3O75145 1194 aa28.02■■■□□ 2.08
PVT1-212ENST00000521951 SNAP25P60880 206 aa28.02■■■□□ 2.08
PVT1-212ENST00000521951 HERVK_113P62684 666 aa28.02■■■□□ 2.08
PVT1-212ENST00000521951 CUL4AQ13619 759 aa28.02■■■□□ 2.08
PVT1-212ENST00000521951 PHKBQ93100 1093 aa28.02■■■□□ 2.08
PVT1-212ENST00000521951 MTMR8Q96EF0 704 aa28.02■■■□□ 2.08
PVT1-212ENST00000521951 NSUN7Q8NE18 718 aaKnown RBP28.02■■■□□ 2.08
PVT1-212ENST00000521951 PIBF1Q8WXW3 757 aa28.02■■■□□ 2.08
PVT1-212ENST00000521951 THSD7BQ9C0I4 1608 aa28.01■■■□□ 2.07
PVT1-212ENST00000521951 VWA5AO00534 786 aa28.01■■■□□ 2.07
PVT1-212ENST00000521951 CDKL5O76039 1030 aa28.01■■■□□ 2.07
PVT1-212ENST00000521951 ANP32AP39687 249 aaKnown RBP28.01■■■□□ 2.07
PVT1-212ENST00000521951 POTEEQ6S8J3 1075 aa28.01■■■□□ 2.07
PVT1-212ENST00000521951 LBX2Q6XYB7 198 aa28.01■■■□□ 2.07
PVT1-212ENST00000521951 PIGSQ96S52 555 aa28.01■■■□□ 2.07
PVT1-212ENST00000521951 PARK7Q99497 189 aaKnown RBP28.01■■■□□ 2.07
PVT1-212ENST00000521951 RANBP17Q9H2T7 1088 aaKnown RBP28.01■■■□□ 2.07
PVT1-212ENST00000521951 V9GY48 417 aaPredicted RBP28.01■■■□□ 2.07
PVT1-212ENST00000521951 COL11A1P12107 1806 aaPredicted RBP28.01■■■□□ 2.07
PVT1-212ENST00000521951 MYH6P13533 1939 aa28■■■□□ 2.07
PVT1-212ENST00000521951 FDX1P10109 184 aa28■■■□□ 2.07
PVT1-212ENST00000521951 SSRP1Q08945 709 aaKnown RBP28■■■□□ 2.07
PVT1-212ENST00000521951 BECN1Q14457 450 aa28■■■□□ 2.07
PVT1-212ENST00000521951 TAF1CQ15572 869 aaPredicted RBP28■■■□□ 2.07
PVT1-212ENST00000521951 RRP36Q96EU6 259 aaKnown RBP28■■■□□ 2.07
PVT1-212ENST00000521951 LLPHQ9BRT6 129 aaKnown RBP28■■■□□ 2.07
PVT1-212ENST00000521951 SLC26A6Q9BXS9 759 aa28■■■□□ 2.07
PVT1-212ENST00000521951 SLC38A10Q9HBR0 1119 aa28■■■□□ 2.07
PVT1-212ENST00000521951 hCG_1642624A0A1W2PR95 340 aa27.99■■■□□ 2.07
PVT1-212ENST00000521951 PRPF3O43395 683 aaKnown RBP27.99■■■□□ 2.07
PVT1-212ENST00000521951 ZBED4O75132 1171 aa27.99■■■□□ 2.07
PVT1-212ENST00000521951 FMNL1O95466 1100 aaPredicted RBP27.99■■■□□ 2.07
PVT1-212ENST00000521951 CDC37Q16543 378 aaPredicted RBP27.99■■■□□ 2.07
PVT1-212ENST00000521951 HOMER1Q86YM7 354 aa27.99■■■□□ 2.07
PVT1-212ENST00000521951 RNF26Q9BY78 433 aaPredicted RBP27.99■■■□□ 2.07
PVT1-212ENST00000521951 JAK2O60674 1132 aa27.98■■■□□ 2.07
PVT1-212ENST00000521951 REPS2Q8NFH8 660 aa27.98■■■□□ 2.07
PVT1-212ENST00000521951 SMCR8Q8TEV9 937 aaPredicted RBP27.98■■■□□ 2.07
PVT1-212ENST00000521951 A0A0G2JMZ2 1700 aa27.98■■■□□ 2.07
PVT1-212ENST00000521951 PTPDC1A2A3K4 754 aa27.97■■■□□ 2.07
PVT1-212ENST00000521951 ZBTB5O15062 677 aa27.97■■■□□ 2.07
PVT1-212ENST00000521951 ALDH1A1P00352 501 aa27.97■■■□□ 2.07
PVT1-212ENST00000521951 QRICH1Q2TAL8 776 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 643.3 ms