RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 ITPRIPQ8IWB1 547 aa7.33□□□□□ -1.24
SPIDR-216ENST00000521918 FTSJ3Q8IY81 847 aaKnown RBP7.33□□□□□ -1.24
SPIDR-216ENST00000521918 SSH3Q8TE77 659 aa7.33□□□□□ -1.24
SPIDR-216ENST00000521918 GTF3C2Q8WUA4 911 aaPredicted RBP7.33□□□□□ -1.24
SPIDR-216ENST00000521918 CAPNS2Q96L46 248 aa7.33□□□□□ -1.24
SPIDR-216ENST00000521918 ZNF408Q9H9D4 720 aa7.33□□□□□ -1.24
SPIDR-216ENST00000521918 HDAC9Q9UKV0 1011 aa7.33□□□□□ -1.24
SPIDR-216ENST00000521918 SCAF8Q9UPN6 1271 aaKnown RBP7.33□□□□□ -1.24
SPIDR-216ENST00000521918 GNEQ9Y223 722 aaKnown RBP7.33□□□□□ -1.24
SPIDR-216ENST00000521918 DNMT3AQ9Y6K1 912 aaPredicted RBP7.33□□□□□ -1.24
SPIDR-216ENST00000521918 PDS5AQ29RF7 1337 aaKnown RBP7.32□□□□□ -1.24
SPIDR-216ENST00000521918 SALL1Q9NSC2 1324 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 F8W031 263 aaPredicted RBP7.32□□□□□ -1.24
SPIDR-216ENST00000521918 TGFBR3LH3BV60 316 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 BNIP3LO60238 219 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 AOC2O75106 756 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 GMPRP36959 345 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 PHKA1P46020 1223 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 HUNKP57058 714 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 FKBP1BP68106 108 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 TFCP2Q12800 502 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 DLGAP5Q15398 846 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 HIF1AQ16665 826 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 IER5Q5VY09 327 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 CEP85Q6P2H3 762 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 APOBEC3FQ8IUX4 373 aaKnown RBP7.32□□□□□ -1.24
SPIDR-216ENST00000521918 ETFBKMTQ8IXQ9 262 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 HELQQ8TDG4 1101 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 PANK1Q8TE04 598 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 TBC1D22AQ8WUA7 517 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 PRMT6Q96LA8 375 aaPredicted RBP7.32□□□□□ -1.24
SPIDR-216ENST00000521918 SUGT1Q9Y2Z0 365 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 PCDHGC4Q9Y5F7 938 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 LAMB1P07942 1786 aa7.32□□□□□ -1.24
SPIDR-216ENST00000521918 OTOFQ9HC10 1997 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 HTTP42858 3142 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 A0A1B0GUL7 405 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 GPR25O00155 361 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 ATXN7O15265 892 aaPredicted RBP7.31□□□□□ -1.24
SPIDR-216ENST00000521918 FOXN1O15353 648 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 EFSO43281 561 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 WIPF1O43516 503 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 FAM157BP0CG42 384 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 ECE1P42892 770 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 CRKP46108 304 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 ATP8B2P98198 1209 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 HDLBPQ00341 1268 aaKnown RBP7.31□□□□□ -1.24
SPIDR-216ENST00000521918 KCNA1Q09470 495 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 CHAF1AQ13111 956 aaPredicted RBP7.31□□□□□ -1.24
SPIDR-216ENST00000521918 MTMR3Q13615 1198 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 RASGRF1Q13972 1273 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 GAS6Q14393 721 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 PRAMEF18Q5VWM3 479 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 FIGNL1Q6PIW4 674 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 BTLAQ7Z6A9 289 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 VPS37DQ86XT2 251 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 MRIQ9BWK5 157 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 RCAN3Q9UKA8 241 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 TTF2Q9UNY4 1162 aaKnown RBP7.31□□□□□ -1.24
SPIDR-216ENST00000521918 NOP58Q9Y2X3 529 aaKnown RBP7.31□□□□□ -1.24
SPIDR-216ENST00000521918 PPP2R3BQ9Y5P8 575 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 RFX7Q2KHR2 1363 aa7.31□□□□□ -1.24
SPIDR-216ENST00000521918 CLRN2A0PK11 232 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 ZBTB39O15060 712 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 PRDX5P30044 214 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 MAP2K2P36507 400 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 TIMM10P62072 90 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 TNP2Q05952 138 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 TYRO3Q06418 890 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 MVPQ14764 893 aaKnown RBP7.3□□□□□ -1.24
SPIDR-216ENST00000521918 MAP3K11Q16584 847 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 C20orf194Q5TEA3 1177 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 APOBEC3HQ6NTF7 200 aaKnown RBP7.3□□□□□ -1.24
SPIDR-216ENST00000521918 RGMBQ6NW40 437 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 MOB2Q70IA6 237 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 RASAL3Q86YV0 1011 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 C2orf69Q8N8R5 385 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 WDR66Q8TBY9 1149 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 IFT43Q96FT9 208 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 ZDHHC15Q96MV8 337 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 TEPSINQ96N21 525 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 CFHR5Q9BXR6 569 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 DEFB129Q9H1M3 183 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 GPR108Q9NPR9 543 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 STIM2Q9P246 746 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 ZNF70Q9UC06 446 aaPredicted RBP7.3□□□□□ -1.24
SPIDR-216ENST00000521918 EGFL7Q9UHF1 273 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 ATXN7L1Q9ULK2 861 aaPredicted RBP7.3□□□□□ -1.24
SPIDR-216ENST00000521918 MTMR7Q9Y216 660 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 AKAP11Q9UKA4 1901 aa7.3□□□□□ -1.24
SPIDR-216ENST00000521918 RPAP1Q9BWH6 1393 aaPredicted RBP7.3□□□□□ -1.24
SPIDR-216ENST00000521918 MAST3O60307 1309 aa7.29□□□□□ -1.24
SPIDR-216ENST00000521918 MAST2Q6P0Q8 1798 aa7.29□□□□□ -1.24
SPIDR-216ENST00000521918 DCDC2BA2VCK2 349 aa7.29□□□□□ -1.24
SPIDR-216ENST00000521918 MAPTP10636 758 aaKnown RBP7.29□□□□□ -1.24
SPIDR-216ENST00000521918 HSPA8P11142 646 aaKnown RBP7.29□□□□□ -1.24
SPIDR-216ENST00000521918 NPR3P17342 541 aa7.29□□□□□ -1.24
SPIDR-216ENST00000521918 BRD2P25440 801 aaKnown RBP7.29□□□□□ -1.24
SPIDR-216ENST00000521918 GRNP28799 593 aaKnown RBP7.29□□□□□ -1.24
SPIDR-216ENST00000521918 KRT76Q01546 638 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms