RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 INCENPQ9NQS7 918 aa11.12□□□□□ -0.63
CLK4-209ENST00000521621 SLC27A2O14975 620 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 KDM4AO75164 1064 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 GRK4P32298 578 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 SLC1A4P43007 532 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 RCAN1P53805 252 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 ZNF543Q08ER8 600 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 TEX2Q8IWB9 1127 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 SAMD3Q8N6K7 520 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 ENAHQ8N8S7 591 aaPredicted RBP11.11□□□□□ -0.63
CLK4-209ENST00000521621 SLC5A4Q9NY91 659 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 REC8O95072 547 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 FLT3LGP49771 235 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 UBXN2AP68543 259 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 CREB3L3Q68CJ9 461 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 RGS22Q8NE09 1264 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 RAET1EQ8TD07 263 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 STX8Q9UNK0 236 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 TNKSO95271 1327 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 B4E1Z4 1266 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 NMT2O60551 498 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 HMGCRP04035 888 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 HMGB1P09429 215 aaKnown RBP11.11□□□□□ -0.63
CLK4-209ENST00000521621 STAT3P40763 770 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 LIFRP42702 1097 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 SPICE1Q8N0Z3 855 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 LRRC47Q8N1G4 583 aaKnown RBP11.11□□□□□ -0.63
CLK4-209ENST00000521621 NKX2-3Q8TAU0 364 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 PORCNQ9H237 461 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 GABRQQ9UN88 632 aa11.11□□□□□ -0.63
CLK4-209ENST00000521621 PLXNA1Q9UIW2 1896 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 FRMPD3Q5JV73 1810 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 ADCY3O60266 1144 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 ATP2B2Q01814 1243 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 GHRHRQ02643 423 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 SART3Q15020 963 aaKnown RBP11.1□□□□□ -0.63
CLK4-209ENST00000521621 SLC9C1Q4G0N8 1177 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 STOX1Q6ZVD7 989 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 UBAC1Q9BSL1 405 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 NID2Q14112 1375 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 LRRC37A2A6NM11 1700 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 ZNF536O15090 1300 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 DNAJC25-GNG10A0A024R161 153 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 HSPA4P34932 840 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 CYB5R4Q7L1T6 521 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 IGDCC4Q8TDY8 1250 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 MTMR8Q96EF0 704 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 KAT14Q9H8E8 782 aa11.1□□□□□ -0.63
CLK4-209ENST00000521621 DDAH1O94760 285 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 ICAM1P05362 532 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 MCM5P33992 734 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 RRP12Q5JTH9 1297 aaKnown RBP11.09□□□□□ -0.63
CLK4-209ENST00000521621 RALYLQ86SE5 291 aaKnown RBP11.09□□□□□ -0.63
CLK4-209ENST00000521621 SGMS1Q86VZ5 419 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 PNMA1Q8ND90 353 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 PAK6Q9NQU5 681 aaPredicted RBP11.09□□□□□ -0.63
CLK4-209ENST00000521621 PRR12Q9ULL5 1215 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 TMEM232C9JQI7 657 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 ERCC3P19447 782 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 ANTXR2P58335 489 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 TRAF1Q13077 416 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 GRM4Q14833 912 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 SYDE2Q5VT97 1194 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 MAMDC4Q6UXC1 1216 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 STK11IPQ8N1F8 1099 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 IL27Q8NEV9 243 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 PAGR1Q9BTK6 254 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 CRISPLD2Q9H0B8 497 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 FBXO28Q9NVF7 368 aa11.09□□□□□ -0.63
CLK4-209ENST00000521621 ZNFX1Q9P2E3 1918 aaKnown RBP11.09□□□□□ -0.63
CLK4-209ENST00000521621 PALM3A6NDB9 673 aaPredicted RBP11.08□□□□□ -0.64
CLK4-209ENST00000521621 FCER1AP12319 257 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 EXOSC10Q01780 885 aaKnown RBP11.08□□□□□ -0.64
CLK4-209ENST00000521621 ZNF792Q3KQV3 632 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 IFIT1BQ5T764 474 aaKnown RBP11.08□□□□□ -0.64
CLK4-209ENST00000521621 ANKLE1Q8NAG6 615 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 LZTS2Q9BRK4 669 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 ANO2Q9NQ90 1003 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 TOMM22Q9NS69 142 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 MAP3K20Q9NYL2 800 aaKnown RBP11.08□□□□□ -0.64
CLK4-209ENST00000521621 IVNS1ABPQ9Y6Y0 642 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 PFASO15067 1338 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 ERICH2A1L162 156 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 CALM1P0DP23 149 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 CALM2P0DP24 149 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 CALM3P0DP25 149 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 MCCP23508 829 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 NUP88Q99567 741 aaPredicted RBP11.08□□□□□ -0.64
CLK4-209ENST00000521621 SYNGAP1Q96PV0 1343 aa11.08□□□□□ -0.64
CLK4-209ENST00000521621 GJB1P08034 283 aa11.07□□□□□ -0.64
CLK4-209ENST00000521621 MORC4Q8TE76 937 aa11.07□□□□□ -0.64
CLK4-209ENST00000521621 TM6SF1Q9BZW5 370 aa11.07□□□□□ -0.64
CLK4-209ENST00000521621 RPTORQ8N122 1335 aa11.07□□□□□ -0.64
CLK4-209ENST00000521621 SH2B2O14492 632 aaPredicted RBP11.07□□□□□ -0.64
CLK4-209ENST00000521621 ZKSCAN1P17029 563 aaPredicted RBP11.07□□□□□ -0.64
CLK4-209ENST00000521621 TROAPQ12815 778 aa11.07□□□□□ -0.64
CLK4-209ENST00000521621 PPP2R5BQ15173 497 aa11.07□□□□□ -0.64
CLK4-209ENST00000521621 CCAR1Q8IX12 1150 aaKnown RBP11.07□□□□□ -0.64
CLK4-209ENST00000521621 AGXT2Q9BYV1 514 aa11.07□□□□□ -0.64
CLK4-209ENST00000521621 LY9Q9HBG7 655 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms