RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 KLHDC9Q8NEP7 349 aa16.27■□□□□ 0.2
SPARC-203ENST00000521327 SLF1Q9BQI6 1058 aa16.27■□□□□ 0.2
SPARC-203ENST00000521327 TEX13BQ9BXU2 312 aa16.27■□□□□ 0.2
SPARC-203ENST00000521327 PUS7LQ9H0K6 701 aaKnown RBP16.27■□□□□ 0.2
SPARC-203ENST00000521327 ZHX1Q9UKY1 873 aaPredicted RBP16.27■□□□□ 0.2
SPARC-203ENST00000521327 RIPK3Q9Y572 518 aa16.27■□□□□ 0.2
SPARC-203ENST00000521327 ROBO3Q96MS0 1386 aa16.26■□□□□ 0.19
SPARC-203ENST00000521327 SYNRGQ9UMZ2 1314 aa16.26■□□□□ 0.19
SPARC-203ENST00000521327 TIMP1P01033 207 aa16.26■□□□□ 0.19
SPARC-203ENST00000521327 DNAJB2P25686 324 aa16.26■□□□□ 0.19
SPARC-203ENST00000521327 MSL3Q8N5Y2 521 aaKnown RBP16.26■□□□□ 0.19
SPARC-203ENST00000521327 SYMPKQ92797 1274 aaKnown RBP16.26■□□□□ 0.19
SPARC-203ENST00000521327 VTI1AQ96AJ9 217 aa16.26■□□□□ 0.19
SPARC-203ENST00000521327 PRDM6Q9NQX0 595 aa16.26■□□□□ 0.19
SPARC-203ENST00000521327 TTC28Q96AY4 2481 aa16.26■□□□□ 0.19
SPARC-203ENST00000521327 A0A0G2JMZ2 1700 aa16.25■□□□□ 0.19
SPARC-203ENST00000521327 ZBED9Q6R2W3 1325 aa16.25■□□□□ 0.19
SPARC-203ENST00000521327 MYADML2A6NDP7 307 aa16.25■□□□□ 0.19
SPARC-203ENST00000521327 MOXD2PA6NHM9 499 aa16.25■□□□□ 0.19
SPARC-203ENST00000521327 F5H6K3 240 aa16.25■□□□□ 0.19
SPARC-203ENST00000521327 IRX5P78411 483 aaPredicted RBP16.25■□□□□ 0.19
SPARC-203ENST00000521327 KLRC3Q07444 240 aa16.25■□□□□ 0.19
SPARC-203ENST00000521327 CCSAPQ6IQ19 270 aaPredicted RBP16.25■□□□□ 0.19
SPARC-203ENST00000521327 MAMDC4Q6UXC1 1216 aa16.25■□□□□ 0.19
SPARC-203ENST00000521327 CPXCR1Q8N123 301 aa16.25■□□□□ 0.19
SPARC-203ENST00000521327 PRPF38AQ8NAV1 312 aaKnown RBP16.25■□□□□ 0.19
SPARC-203ENST00000521327 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.25■□□□□ 0.19
SPARC-203ENST00000521327 ZNF576Q9H609 170 aa16.25■□□□□ 0.19
SPARC-203ENST00000521327 NAV1Q8NEY1 1877 aa16.25■□□□□ 0.19
SPARC-203ENST00000521327 SYNGAP1Q96PV0 1343 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 DNAJC25-GNG10A0A024R161 153 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 DUSP11O75319 330 aaKnown RBP16.24■□□□□ 0.19
SPARC-203ENST00000521327 NDUFB10O96000 172 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 C6orf222P0C671 652 aaPredicted RBP16.24■□□□□ 0.19
SPARC-203ENST00000521327 MS4A1P11836 297 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 ACVR2BQ13705 512 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 MFSD5Q6N075 450 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 ZSCAN25Q6NSZ9 544 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 C16orf59Q7L2K0 433 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 USP38Q8NB14 1042 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 TIFAQ96CG3 184 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 GLT1D1Q96MS3 346 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 MKNK2Q9HBH9 465 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 ZBTB40Q9NUA8 1239 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 NYAP2Q9P242 653 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 ARPP21Q9UBL0 812 aaPredicted RBP16.24■□□□□ 0.19
SPARC-203ENST00000521327 TBX21Q9UL17 535 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 COG6Q9Y2V7 657 aa16.24■□□□□ 0.19
SPARC-203ENST00000521327 CTDP1Q9Y5B0 961 aaPredicted RBP16.24■□□□□ 0.19
SPARC-203ENST00000521327 ELP1O95163 1332 aa16.23■□□□□ 0.19
SPARC-203ENST00000521327 MINDY4BA8MYZ0 360 aa16.23■□□□□ 0.19
SPARC-203ENST00000521327 ZBED4O75132 1171 aa16.23■□□□□ 0.19
SPARC-203ENST00000521327 RASA1P20936 1047 aa16.23■□□□□ 0.19
SPARC-203ENST00000521327 ANKRD35Q8N283 1001 aa16.23■□□□□ 0.19
SPARC-203ENST00000521327 PCSK9Q8NBP7 692 aaKnown RBP16.23■□□□□ 0.19
SPARC-203ENST00000521327 KIFC2Q96AC6 838 aa16.23■□□□□ 0.19
SPARC-203ENST00000521327 STRBPQ96SI9 672 aaKnown RBP16.23■□□□□ 0.19
SPARC-203ENST00000521327 RAVER2Q9HCJ3 691 aaKnown RBP16.23■□□□□ 0.19
SPARC-203ENST00000521327 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.23■□□□□ 0.19
SPARC-203ENST00000521327 CLIP2Q9UDT6 1046 aa16.23■□□□□ 0.19
SPARC-203ENST00000521327 DDX19BQ9UMR2 479 aa16.23■□□□□ 0.19
SPARC-203ENST00000521327 GRXCR1A8MXD5 290 aa16.22■□□□□ 0.19
SPARC-203ENST00000521327 ATP2A1O14983 1001 aa16.22■□□□□ 0.19
SPARC-203ENST00000521327 ADCY6O43306 1168 aa16.22■□□□□ 0.19
SPARC-203ENST00000521327 ASGR1P07306 291 aa16.22■□□□□ 0.19
SPARC-203ENST00000521327 CDK7P50613 346 aa16.22■□□□□ 0.19
SPARC-203ENST00000521327 PPIGQ13427 754 aaKnown RBP eCLIP16.22■□□□□ 0.19
SPARC-203ENST00000521327 CCDC144BQ3MJ40 725 aa16.22■□□□□ 0.19
SPARC-203ENST00000521327 SBK1Q52WX2 424 aa16.22■□□□□ 0.19
SPARC-203ENST00000521327 GNASQ5JWF2 1037 aa16.22■□□□□ 0.19
SPARC-203ENST00000521327 CCDC129Q6ZRS4 1044 aa16.22■□□□□ 0.19
SPARC-203ENST00000521327 ZNF467Q7Z7K2 595 aaPredicted RBP16.22■□□□□ 0.19
SPARC-203ENST00000521327 ABHD16BQ9H3Z7 469 aa16.22■□□□□ 0.19
SPARC-203ENST00000521327 SPC25Q9HBM1 224 aa16.22■□□□□ 0.19
SPARC-203ENST00000521327 MROH7Q68CQ1 1323 aa16.21■□□□□ 0.19
SPARC-203ENST00000521327 SMCHD1A6NHR9 2005 aa16.21■□□□□ 0.19
SPARC-203ENST00000521327 GSG1L2A8MUP6 293 aa16.21■□□□□ 0.19
SPARC-203ENST00000521327 ARVCFO00192 962 aa16.21■□□□□ 0.19
SPARC-203ENST00000521327 ACRP10323 421 aa16.21■□□□□ 0.19
SPARC-203ENST00000521327 CSF2RAP15509 400 aa16.21■□□□□ 0.19
SPARC-203ENST00000521327 CST5P28325 142 aaPredicted RBP16.21■□□□□ 0.19
SPARC-203ENST00000521327 PBX2P40425 430 aa16.21■□□□□ 0.19
SPARC-203ENST00000521327 TJAP1Q5JTD0 557 aa16.21■□□□□ 0.19
SPARC-203ENST00000521327 TMEM240Q5SV17 173 aa16.21■□□□□ 0.19
SPARC-203ENST00000521327 CCDC174Q6PII3 467 aa16.21■□□□□ 0.19
SPARC-203ENST00000521327 PPM1EQ8WY54 764 aa16.21■□□□□ 0.19
SPARC-203ENST00000521327 PPP1R12CQ9BZL4 782 aa16.21■□□□□ 0.19
SPARC-203ENST00000521327 A0A0U1RQG5 324 aaPredicted RBP16.2■□□□□ 0.18
SPARC-203ENST00000521327 SMARCA5O60264 1052 aaPredicted RBP16.2■□□□□ 0.18
SPARC-203ENST00000521327 GJA9P57773 515 aa16.2■□□□□ 0.18
SPARC-203ENST00000521327 ARMCX2Q7L311 632 aa16.2■□□□□ 0.18
SPARC-203ENST00000521327 TMEM199Q8N511 208 aa16.2■□□□□ 0.18
SPARC-203ENST00000521327 FGD4Q96M96 766 aa16.2■□□□□ 0.18
SPARC-203ENST00000521327 PBX4Q9BYU1 374 aa16.2■□□□□ 0.18
SPARC-203ENST00000521327 SLC38A10Q9HBR0 1119 aa16.2■□□□□ 0.18
SPARC-203ENST00000521327 PRDM1O75626 825 aa16.19■□□□□ 0.18
SPARC-203ENST00000521327 RASIP1Q5U651 963 aa16.19■□□□□ 0.18
SPARC-203ENST00000521327 GIMAP6Q6P9H5 292 aa16.19■□□□□ 0.18
SPARC-203ENST00000521327 ZNF365Q70YC5 407 aa16.19■□□□□ 0.18
SPARC-203ENST00000521327 CCDC144CPQ8IYA2 1237 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms