RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 RIPK3Q9Y572 518 aa23.39■■□□□ 1.33
PABPC1-215ENST00000520804 ZBED4O75132 1171 aa23.38■■□□□ 1.33
PABPC1-215ENST00000520804 TSPY3P0CV98 308 aa23.38■■□□□ 1.33
PABPC1-215ENST00000520804 TSPY8P0CW00 308 aa23.38■■□□□ 1.33
PABPC1-215ENST00000520804 KIFC2Q96AC6 838 aa23.38■■□□□ 1.33
PABPC1-215ENST00000520804 CRBNQ96SW2 442 aa23.38■■□□□ 1.33
PABPC1-215ENST00000520804 FEM1BQ9UK73 627 aa23.38■■□□□ 1.33
PABPC1-215ENST00000520804 RARBP10826 455 aa23.37■■□□□ 1.33
PABPC1-215ENST00000520804 ADCYAP1R1P41586 468 aa23.37■■□□□ 1.33
PABPC1-215ENST00000520804 TFAP4Q01664 338 aa23.37■■□□□ 1.33
PABPC1-215ENST00000520804 SNX17Q15036 470 aa23.37■■□□□ 1.33
PABPC1-215ENST00000520804 ANKRD45Q5TZF3 282 aa23.37■■□□□ 1.33
PABPC1-215ENST00000520804 CPXCR1Q8N123 301 aa23.37■■□□□ 1.33
PABPC1-215ENST00000520804 LBHD1Q9BQE6 289 aaPredicted RBP23.37■■□□□ 1.33
PABPC1-215ENST00000520804 SLC38A10Q9HBR0 1119 aa23.37■■□□□ 1.33
PABPC1-215ENST00000520804 XPNPEP3Q9NQH7 507 aa23.37■■□□□ 1.33
PABPC1-215ENST00000520804 ZBTB47Q9UFB7 747 aaPredicted RBP23.37■■□□□ 1.33
PABPC1-215ENST00000520804 ATP11BQ9Y2G3 1177 aa23.37■■□□□ 1.33
PABPC1-215ENST00000520804 DNAH12Q6ZR08 3092 aa23.37■■□□□ 1.33
PABPC1-215ENST00000520804 ZNF865P0CJ78 1059 aaPredicted RBP23.36■■□□□ 1.33
PABPC1-215ENST00000520804 TAL1P17542 331 aaPredicted RBP23.36■■□□□ 1.33
PABPC1-215ENST00000520804 SLFN13Q68D06 897 aa23.36■■□□□ 1.33
PABPC1-215ENST00000520804 CCDC129Q6ZRS4 1044 aa23.36■■□□□ 1.33
PABPC1-215ENST00000520804 MSL3Q8N5Y2 521 aaKnown RBP23.36■■□□□ 1.33
PABPC1-215ENST00000520804 DDX11Q96FC9 970 aa23.36■■□□□ 1.33
PABPC1-215ENST00000520804 PRKAG2Q9UGJ0 569 aa23.36■■□□□ 1.33
PABPC1-215ENST00000520804 CTDP1Q9Y5B0 961 aaPredicted RBP23.36■■□□□ 1.33
PABPC1-215ENST00000520804 SMCHD1A6NHR9 2005 aa23.36■■□□□ 1.33
PABPC1-215ENST00000520804 DNAJC25-GNG10A0A024R161 153 aa23.35■■□□□ 1.33
PABPC1-215ENST00000520804 FOXP2O15409 715 aa23.35■■□□□ 1.33
PABPC1-215ENST00000520804 BMP3P12645 472 aa23.35■■□□□ 1.33
PABPC1-215ENST00000520804 FERMT2Q96AC1 680 aa23.35■■□□□ 1.33
PABPC1-215ENST00000520804 RAVER2Q9HCJ3 691 aaKnown RBP23.35■■□□□ 1.33
PABPC1-215ENST00000520804 CNPY2Q9Y2B0 182 aa23.35■■□□□ 1.33
PABPC1-215ENST00000520804 LTBP2Q14767 1821 aa23.34■■□□□ 1.33
PABPC1-215ENST00000520804 AKR1A1P14550 325 aa23.34■■□□□ 1.33
PABPC1-215ENST00000520804 SLC4A3P48751 1232 aa23.34■■□□□ 1.33
PABPC1-215ENST00000520804 OAZ1P54368 228 aa23.34■■□□□ 1.33
PABPC1-215ENST00000520804 HDAC1Q13547 482 aaPredicted RBP23.34■■□□□ 1.33
PABPC1-215ENST00000520804 TRIM60Q495X7 471 aa23.34■■□□□ 1.33
PABPC1-215ENST00000520804 C1orf53Q5VUE5 145 aa23.34■■□□□ 1.33
PABPC1-215ENST00000520804 MAMDC4Q6UXC1 1216 aa23.34■■□□□ 1.33
PABPC1-215ENST00000520804 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.34■■□□□ 1.33
PABPC1-215ENST00000520804 RNF180Q86T96 592 aa23.34■■□□□ 1.33
PABPC1-215ENST00000520804 EVI5LQ96CN4 794 aa23.34■■□□□ 1.33
PABPC1-215ENST00000520804 PHF24Q9UPV7 400 aa23.34■■□□□ 1.33
PABPC1-215ENST00000520804 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.34■■□□□ 1.33
PABPC1-215ENST00000520804 SYNGAP1Q96PV0 1343 aa23.33■■□□□ 1.33
PABPC1-215ENST00000520804 PGK1P00558 417 aa23.33■■□□□ 1.33
PABPC1-215ENST00000520804 ZNF467Q7Z7K2 595 aaPredicted RBP23.33■■□□□ 1.33
PABPC1-215ENST00000520804 SNAI1O95863 264 aaPredicted RBP23.32■■□□□ 1.32
PABPC1-215ENST00000520804 FDX1P10109 184 aa23.32■■□□□ 1.32
PABPC1-215ENST00000520804 PDE1AP54750 535 aa23.32■■□□□ 1.32
PABPC1-215ENST00000520804 CHST13Q8NET6 341 aa23.32■■□□□ 1.32
PABPC1-215ENST00000520804 GMCL1Q96IK5 515 aa23.32■■□□□ 1.32
PABPC1-215ENST00000520804 FBXO40Q9UH90 709 aa23.32■■□□□ 1.32
PABPC1-215ENST00000520804 TMEM232C9JQI7 657 aa23.31■■□□□ 1.32
PABPC1-215ENST00000520804 STAT2P52630 851 aa23.31■■□□□ 1.32
PABPC1-215ENST00000520804 CTDSPL2Q05D32 466 aa23.31■■□□□ 1.32
PABPC1-215ENST00000520804 PPP4R3BQ5MIZ7 849 aa23.31■■□□□ 1.32
PABPC1-215ENST00000520804 VPS53Q5VIR6 699 aa23.31■■□□□ 1.32
PABPC1-215ENST00000520804 ANKRD35Q8N283 1001 aa23.31■■□□□ 1.32
PABPC1-215ENST00000520804 DEFB123Q8N688 67 aa23.31■■□□□ 1.32
PABPC1-215ENST00000520804 INCENPQ9NQS7 918 aa23.31■■□□□ 1.32
PABPC1-215ENST00000520804 PRDM5Q9NQX1 630 aaPredicted RBP23.31■■□□□ 1.32
PABPC1-215ENST00000520804 TSPY2A6NKD2 308 aa23.3■■□□□ 1.32
PABPC1-215ENST00000520804 ADAMTS4O75173 837 aa23.3■■□□□ 1.32
PABPC1-215ENST00000520804 SLC1A4P43007 532 aa23.3■■□□□ 1.32
PABPC1-215ENST00000520804 Q7L0L9 218 aa23.3■■□□□ 1.32
PABPC1-215ENST00000520804 FAM160B2Q86V87 743 aa23.3■■□□□ 1.32
PABPC1-215ENST00000520804 STAG1Q8WVM7 1258 aa23.3■■□□□ 1.32
PABPC1-215ENST00000520804 LENG1Q96BZ8 264 aaPredicted RBP23.3■■□□□ 1.32
PABPC1-215ENST00000520804 PDLIM7Q9NR12 457 aa23.3■■□□□ 1.32
PABPC1-215ENST00000520804 IL17RBQ9NRM6 502 aa23.3■■□□□ 1.32
PABPC1-215ENST00000520804 HELLSQ9NRZ9 838 aa23.3■■□□□ 1.32
PABPC1-215ENST00000520804 ANAPC4Q9UJX5 808 aa23.3■■□□□ 1.32
PABPC1-215ENST00000520804 FAM184BQ9ULE4 1060 aa23.3■■□□□ 1.32
PABPC1-215ENST00000520804 ISY1Q9ULR0 285 aaKnown RBP23.3■■□□□ 1.32
PABPC1-215ENST00000520804 STX8Q9UNK0 236 aa23.3■■□□□ 1.32
PABPC1-215ENST00000520804 CHURC1Q8WUH1 139 aa23.29■■□□□ 1.32
PABPC1-215ENST00000520804 FGD4Q96M96 766 aa23.29■■□□□ 1.32
PABPC1-215ENST00000520804 ZHX1Q9UKY1 873 aaPredicted RBP23.29■■□□□ 1.32
PABPC1-215ENST00000520804 MCCP23508 829 aa23.28■■□□□ 1.32
PABPC1-215ENST00000520804 TLE2Q04725 743 aa23.28■■□□□ 1.32
PABPC1-215ENST00000520804 ALX1Q15699 326 aa23.28■■□□□ 1.32
PABPC1-215ENST00000520804 TSEN34Q9BSV6 310 aaKnown RBP23.28■■□□□ 1.32
PABPC1-215ENST00000520804 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.28■■□□□ 1.32
PABPC1-215ENST00000520804 TACC3Q9Y6A5 838 aa23.28■■□□□ 1.32
PABPC1-215ENST00000520804 SYNRGQ9UMZ2 1314 aa23.28■■□□□ 1.32
PABPC1-215ENST00000520804 A0A1W2PQ45 241 aaPredicted RBP23.27■■□□□ 1.32
PABPC1-215ENST00000520804 A0A1W2PQY0 241 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 NMT2O60551 498 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 PLA2G6O60733 806 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 NOVP48745 357 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 IKQ13123 557 aaPredicted RBP23.27■■□□□ 1.32
PABPC1-215ENST00000520804 ACVR2BQ13705 512 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 SH3RF1Q7Z6J0 888 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 TICAM2Q86XR7 235 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 KLHDC9Q8NEP7 349 aa23.27■■□□□ 1.32
PABPC1-215ENST00000520804 BADQ92934 168 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms