RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 USP17L18D6R9N7 530 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 USP17L22D6RA61 530 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 USP17L17D6RBQ6 530 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 USP17L19D6RCP7 530 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 USP17L20D6RJB6 530 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 H0YIN7 160 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 RNF113AO15541 343 aaKnown RBP9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 EPB41L2O43491 1005 aaKnown RBP9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 ALAS2P22557 587 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 COL8A1P27658 744 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 CHRNA5P30532 468 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 KCNJ4P48050 445 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 USP17L24Q0WX57 530 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 DPYDQ12882 1025 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 ZMYM1Q5SVZ6 1142 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 SYT9Q86SS6 491 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 ANKMY2Q8IV38 441 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 RUFY2Q8WXA3 655 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 SCG3Q8WXD2 468 aaKnown RBP9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 SUSD3Q96L08 255 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 CEP63Q96MT8 703 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 BRD7Q9NPI1 651 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 MED23Q9ULK4 1368 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 COL1A1P02452 1464 aaPredicted RBP9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 DUOX1Q9NRD9 1551 aa9.44□□□□□ -0.9
CTHRC1-203ENST00000520337 RAD50Q92878 1312 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 ADARB2-AS1A8MUL3 147 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 ZBTB7AO95365 584 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 IGFBP4P22692 258 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 ATP2B4P23634 1241 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 LMOD1P29536 600 aaPredicted RBP9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 HIBADHP31937 336 aaKnown RBP9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 PTH1RQ03431 593 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 TYRO3Q06418 890 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 SFSWAPQ12872 951 aaKnown RBP9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 R3HDM1Q15032 1099 aaKnown RBP9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 CAVIN4Q5BKX8 364 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 OLFM4Q6UX06 510 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 ZNF589Q86UQ0 364 aaPredicted RBP9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 TBC1D16Q8TBP0 767 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 ZNF622Q969S3 477 aaKnown RBP eCLIP9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 IL17RAQ96F46 866 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 HSH2DQ96JZ2 352 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 SEC62Q99442 399 aaKnown RBP9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 MDFIQ99750 246 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 MTFR1LQ9H019 292 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 ANO2Q9NQ90 1003 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 GNL3LQ9NVN8 582 aaKnown RBP9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 POLLQ9UGP5 575 aa9.43□□□□□ -0.9
CTHRC1-203ENST00000520337 LAMA4Q16363 1823 aa9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 PDS5AQ29RF7 1337 aaKnown RBP9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 UFL1O94874 794 aa9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 PROCP04070 461 aa9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 KCNA3P22001 575 aa9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 ADD2P35612 726 aa9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 GRIN2CQ14957 1233 aa9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 TTF1Q15361 905 aaPredicted RBP9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 MCMDC2Q4G0Z9 681 aa9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 TNFRSF25Q93038 417 aa9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 GPR101Q96P66 508 aaPredicted RBP9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 HINFPQ9BQA5 517 aa9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 HELLSQ9NRZ9 838 aa9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 MYH2Q9UKX2 1941 aa9.42□□□□□ -0.9
CTHRC1-203ENST00000520337 SNED1Q8TER0 1413 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 CCDC171Q6TFL3 1326 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 ZNF646O15015 1829 aaPredicted RBP9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 TCRBV5S4A2TA0A5A2 114 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 KRBA1A5PL33 1030 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 M0R2C6 588 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 ZFYP08048 801 aaPredicted RBP9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 HSPA4P34932 840 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 SPEM2Q0P670 501 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 RTN1Q16799 776 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 IER5Q5VY09 327 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 PRPF40BQ6NWY9 871 aaKnown RBP9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 CCDC129Q6ZRS4 1044 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 KIAA1211Q6ZU35 1233 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 TDRD7Q8NHU6 1098 aaKnown RBP9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 MAP4K1Q92918 833 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 KCNB2Q92953 911 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 OSBP2Q969R2 916 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 SUV39H2Q9H5I1 410 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 EFCC1Q9HA90 598 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 WWC3Q9ULE0 1092 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 DENND2AQ9ULE3 1009 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 PALD1Q9ULE6 856 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 KCNH4Q9UQ05 1017 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 SCN9AQ15858 1988 aa9.41□□□□□ -0.9
CTHRC1-203ENST00000520337 MAST3O60307 1309 aa9.4□□□□□ -0.9
CTHRC1-203ENST00000520337 IDH1O75874 414 aaKnown RBP9.4□□□□□ -0.9
CTHRC1-203ENST00000520337 DPEP1P16444 411 aa9.4□□□□□ -0.9
CTHRC1-203ENST00000520337 PDE6AP16499 860 aa9.4□□□□□ -0.9
CTHRC1-203ENST00000520337 NECTIN1Q15223 517 aa9.4□□□□□ -0.9
CTHRC1-203ENST00000520337 UBE3CQ15386 1083 aa9.4□□□□□ -0.9
CTHRC1-203ENST00000520337 SLC9C2Q5TAH2 1124 aa9.4□□□□□ -0.9
CTHRC1-203ENST00000520337 ILDR2Q71H61 639 aa9.4□□□□□ -0.9
CTHRC1-203ENST00000520337 VPS37DQ86XT2 251 aa9.4□□□□□ -0.9
CTHRC1-203ENST00000520337 ZNF280CQ8ND82 737 aa9.4□□□□□ -0.9
CTHRC1-203ENST00000520337 APPBP2Q92624 585 aa9.4□□□□□ -0.9
CTHRC1-203ENST00000520337 SLC30A3Q99726 388 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms