RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 TMEM60Q9H2L4 133 aa29.2■■■□□ 2.26
COL13A1-213ENST00000520267 PPP1R3GB7ZBB8 358 aa29.19■■■□□ 2.26
COL13A1-213ENST00000520267 CTIFO43310 598 aaKnown RBP29.19■■■□□ 2.26
COL13A1-213ENST00000520267 NRDCO43847 1150 aa29.19■■■□□ 2.26
COL13A1-213ENST00000520267 STX17P56962 302 aa29.19■■■□□ 2.26
COL13A1-213ENST00000520267 PYM1Q9BRP8 204 aaKnown RBP29.19■■■□□ 2.26
COL13A1-213ENST00000520267 ZC3H12CQ9C0D7 883 aaKnown RBP29.19■■■□□ 2.26
COL13A1-213ENST00000520267 TMX1Q9H3N1 280 aa29.19■■■□□ 2.26
COL13A1-213ENST00000520267 HOMER1Q86YM7 354 aa29.19■■■□□ 2.26
COL13A1-213ENST00000520267 NLGN1Q8N2Q7 840 aa29.19■■■□□ 2.26
COL13A1-213ENST00000520267 PPP1R13BQ96KQ4 1090 aa29.19■■■□□ 2.26
COL13A1-213ENST00000520267 QSER1Q2KHR3 1735 aa29.18■■■□□ 2.26
COL13A1-213ENST00000520267 PSDA5PKW4 1024 aaPredicted RBP29.18■■■□□ 2.26
COL13A1-213ENST00000520267 TBX2Q13207 712 aaPredicted RBP29.18■■■□□ 2.26
COL13A1-213ENST00000520267 DOK7Q18PE1 504 aa29.18■■■□□ 2.26
COL13A1-213ENST00000520267 SPATA1Q5VX52 437 aa29.18■■■□□ 2.26
COL13A1-213ENST00000520267 AEBP2Q6ZN18 517 aaPredicted RBP29.18■■■□□ 2.26
COL13A1-213ENST00000520267 ZMYND12Q9H0C1 365 aa29.18■■■□□ 2.26
COL13A1-213ENST00000520267 DDX4Q9NQI0 724 aaKnown RBP29.18■■■□□ 2.26
COL13A1-213ENST00000520267 NPR1P16066 1061 aa29.18■■■□□ 2.26
COL13A1-213ENST00000520267 NAPAP54920 295 aa29.18■■■□□ 2.26
COL13A1-213ENST00000520267 SYNRGQ9UMZ2 1314 aa29.18■■■□□ 2.26
COL13A1-213ENST00000520267 USP17L5A8MUK1 530 aa29.17■■■□□ 2.26
COL13A1-213ENST00000520267 VAT1LQ9HCJ6 419 aa29.17■■■□□ 2.26
COL13A1-213ENST00000520267 TTF2Q9UNY4 1162 aaKnown RBP29.17■■■□□ 2.26
COL13A1-213ENST00000520267 SUGT1Q9Y2Z0 365 aa29.17■■■□□ 2.26
COL13A1-213ENST00000520267 ADAMTSL1Q8N6G6 1762 aa29.17■■■□□ 2.26
COL13A1-213ENST00000520267 GTPBP6O43824 516 aaPredicted RBP29.17■■■□□ 2.26
COL13A1-213ENST00000520267 GABPAQ06546 454 aa29.17■■■□□ 2.26
COL13A1-213ENST00000520267 KARSQ15046 597 aaKnown RBP29.17■■■□□ 2.26
COL13A1-213ENST00000520267 DTHD1Q6ZMT9 781 aa29.17■■■□□ 2.26
COL13A1-213ENST00000520267 CCDC112Q8NEF3 446 aa29.17■■■□□ 2.26
COL13A1-213ENST00000520267 AKT1S1Q96B36 256 aa29.17■■■□□ 2.26
COL13A1-213ENST00000520267 RRP36Q96EU6 259 aaKnown RBP29.17■■■□□ 2.26
COL13A1-213ENST00000520267 MYH8P13535 1937 aa29.17■■■□□ 2.26
COL13A1-213ENST00000520267 FAM177A1Q8N128 213 aaPredicted RBP29.16■■■□□ 2.26
COL13A1-213ENST00000520267 COL11A2P13942 1736 aaPredicted RBP29.15■■■□□ 2.26
COL13A1-213ENST00000520267 PIGSQ96S52 555 aa29.15■■■□□ 2.26
COL13A1-213ENST00000520267 MAP7D2Q96T17 732 aa29.15■■■□□ 2.26
COL13A1-213ENST00000520267 UBA5Q9GZZ9 404 aa29.15■■■□□ 2.26
COL13A1-213ENST00000520267 PLIN4Q96Q06 1357 aa29.15■■■□□ 2.26
COL13A1-213ENST00000520267 TXLNAP40222 546 aa29.15■■■□□ 2.26
COL13A1-213ENST00000520267 NR1I3Q14994 352 aa29.15■■■□□ 2.26
COL13A1-213ENST00000520267 DPP8Q6V1X1 898 aaPredicted RBP29.15■■■□□ 2.26
COL13A1-213ENST00000520267 SMCO2A6NFE2 343 aa29.14■■■□□ 2.26
COL13A1-213ENST00000520267 PP2D1A8MPX8 630 aa29.14■■■□□ 2.26
COL13A1-213ENST00000520267 AKR1B1P15121 316 aa29.14■■■□□ 2.26
COL13A1-213ENST00000520267 SMARCA1P28370 1054 aa29.14■■■□□ 2.26
COL13A1-213ENST00000520267 SCNN1DP51172 638 aa29.14■■■□□ 2.26
COL13A1-213ENST00000520267 SPECC1LQ69YQ0 1117 aa29.14■■■□□ 2.26
COL13A1-213ENST00000520267 APTXQ7Z2E3 356 aaKnown RBP29.14■■■□□ 2.26
COL13A1-213ENST00000520267 MTMR4Q9NYA4 1195 aa29.14■■■□□ 2.26
COL13A1-213ENST00000520267 FRMPD2Q68DX3 1309 aaPredicted RBP29.13■■■□□ 2.25
COL13A1-213ENST00000520267 A0A1B0GTH6 734 aa29.13■■■□□ 2.25
COL13A1-213ENST00000520267 PDHBP11177 359 aa29.13■■■□□ 2.25
COL13A1-213ENST00000520267 STAT6P42226 847 aa29.13■■■□□ 2.25
COL13A1-213ENST00000520267 TMEM139Q8IV31 216 aa29.13■■■□□ 2.25
COL13A1-213ENST00000520267 CCDC12Q8WUD4 166 aaPredicted RBP29.13■■■□□ 2.25
COL13A1-213ENST00000520267 DISC1Q9NRI5 854 aa29.13■■■□□ 2.25
COL13A1-213ENST00000520267 USP40Q9NVE5 1235 aa29.13■■■□□ 2.25
COL13A1-213ENST00000520267 SEC63Q9UGP8 760 aaKnown RBP29.13■■■□□ 2.25
COL13A1-213ENST00000520267 CTNND2Q9UQB3 1225 aa29.13■■■□□ 2.25
COL13A1-213ENST00000520267 CDKAL1Q5VV42 579 aa29.13■■■□□ 2.25
COL13A1-213ENST00000520267 C6orf50Q9HD87 102 aa29.13■■■□□ 2.25
COL13A1-213ENST00000520267 ALDH1B1P30837 517 aa29.12■■■□□ 2.25
COL13A1-213ENST00000520267 RRAGBQ5VZM2 374 aa29.12■■■□□ 2.25
COL13A1-213ENST00000520267 COBLO75128 1261 aa29.11■■■□□ 2.25
COL13A1-213ENST00000520267 NAALADL2Q58DX5 795 aa29.11■■■□□ 2.25
COL13A1-213ENST00000520267 KRT25Q7Z3Z0 450 aa29.11■■■□□ 2.25
COL13A1-213ENST00000520267 CLEC10AQ8IUN9 316 aa29.11■■■□□ 2.25
COL13A1-213ENST00000520267 LRRC47Q8N1G4 583 aaKnown RBP29.11■■■□□ 2.25
COL13A1-213ENST00000520267 RIOX1Q9H6W3 641 aa29.11■■■□□ 2.25
COL13A1-213ENST00000520267 IGKV6D-41A0A0C4DH26 115 aa29.11■■■□□ 2.25
COL13A1-213ENST00000520267 RPN1P04843 607 aaKnown RBP29.11■■■□□ 2.25
COL13A1-213ENST00000520267 MMP10P09238 476 aa29.11■■■□□ 2.25
COL13A1-213ENST00000520267 HMGB2P26583 209 aaKnown RBP29.11■■■□□ 2.25
COL13A1-213ENST00000520267 EIF6P56537 245 aaKnown RBP29.11■■■□□ 2.25
COL13A1-213ENST00000520267 NONOQ15233 471 aaKnown RBP eCLIP29.11■■■□□ 2.25
COL13A1-213ENST00000520267 MTERF4Q7Z6M4 381 aaKnown RBP29.11■■■□□ 2.25
COL13A1-213ENST00000520267 KIF2AO00139 706 aaPredicted RBP29.1■■■□□ 2.25
COL13A1-213ENST00000520267 TEX33O43247 280 aa29.1■■■□□ 2.25
COL13A1-213ENST00000520267 GNA11P29992 359 aa29.1■■■□□ 2.25
COL13A1-213ENST00000520267 PDE6BP35913 854 aa29.1■■■□□ 2.25
COL13A1-213ENST00000520267 TC2NQ8N9U0 490 aa29.1■■■□□ 2.25
COL13A1-213ENST00000520267 KIF18AQ8NI77 898 aa29.1■■■□□ 2.25
COL13A1-213ENST00000520267 LAD1O00515 517 aa29.1■■■□□ 2.25
COL13A1-213ENST00000520267 SOGA3Q5TF21 947 aa29.1■■■□□ 2.25
COL13A1-213ENST00000520267 PLSCR1O15162 318 aa29.09■■■□□ 2.25
COL13A1-213ENST00000520267 PRPHP41219 470 aa29.09■■■□□ 2.25
COL13A1-213ENST00000520267 ADKP55263 362 aaKnown RBP29.09■■■□□ 2.25
COL13A1-213ENST00000520267 LETM2Q2VYF4 491 aa29.09■■■□□ 2.25
COL13A1-213ENST00000520267 CDC42EP5Q6NZY7 148 aa29.09■■■□□ 2.25
COL13A1-213ENST00000520267 APBA3O96018 575 aa29.09■■■□□ 2.25
COL13A1-213ENST00000520267 ZNF658Q5TYW1 1059 aaPredicted RBP29.09■■■□□ 2.25
COL13A1-213ENST00000520267 MASTLQ96GX5 879 aa29.09■■■□□ 2.25
COL13A1-213ENST00000520267 CCSER1Q9C0I3 900 aa29.09■■■□□ 2.25
COL13A1-213ENST00000520267 SERPINB13Q9UIV8 391 aa29.09■■■□□ 2.25
COL13A1-213ENST00000520267 CCNT1O60563 726 aaKnown RBP29.08■■■□□ 2.25
COL13A1-213ENST00000520267 PLIN2Q99541 437 aa29.08■■■□□ 2.25
COL13A1-213ENST00000520267 PARP3Q9Y6F1 533 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms