RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 PPP1R1BQ9UD71 204 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 CNTNAP4Q9C0A0 1308 aa5.13□□□□□ -1.59
HMGB1P41-201ENST00000520234 TCAF2A6NFQ2 919 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 PRR33A8MZF0 331 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 SUV39H1O43463 412 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 NUAK1O60285 661 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 AFMP43652 599 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 NFKB2Q00653 900 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 SLC7A5Q01650 507 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 NFIXQ14938 502 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 NCAPHQ15003 741 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 FXNQ16595 210 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 NKPD1Q17RQ9 610 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 ANKRD39Q53RE8 183 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 ATG14Q6ZNE5 492 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 DTWD2Q8NBA8 298 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 UBXN4Q92575 508 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 HRASLS5Q96KN8 279 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 LTBP3Q9NS15 1303 aa5.12□□□□□ -1.59
HMGB1P41-201ENST00000520234 FAM86C2PA6NEL3 165 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 KLF4O43474 513 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 ITIH2P19823 946 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 TNK2Q07912 1038 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 AOC3Q16853 763 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 NBPF9Q3BBW0 867 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 GNPTABQ3T906 1256 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 THAP5Q7Z6K1 395 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 SPACA3Q8IXA5 215 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 CCDC144CPQ8IYA2 1237 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 ENOX1Q8TC92 643 aaKnown RBP5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 DHX38Q92620 1227 aaKnown RBP5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 Q96M66 194 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 MKRN2Q9H000 416 aaKnown RBP5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 ASCC2Q9H1I8 757 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 TRIT1Q9H3H1 467 aaKnown RBP5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 ZCCHC4Q9H5U6 513 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 GPATCH2Q9NW75 528 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 PRR13Q9NZ81 148 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 PLAGL2Q9UPG8 496 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 CTNND2Q9UQB3 1225 aa5.11□□□□□ -1.59
HMGB1P41-201ENST00000520234 U2SURPO15042 1029 aaKnown RBP5.1□□□□□ -1.59
HMGB1P41-201ENST00000520234 ADRB1P08588 477 aa5.1□□□□□ -1.59
HMGB1P41-201ENST00000520234 AUHQ13825 339 aaKnown RBP5.1□□□□□ -1.59
HMGB1P41-201ENST00000520234 RAB33AQ14088 237 aa5.1□□□□□ -1.59
HMGB1P41-201ENST00000520234 VHLLQ6RSH7 139 aa5.1□□□□□ -1.59
HMGB1P41-201ENST00000520234 C7orf61Q8IZ16 206 aa5.1□□□□□ -1.59
HMGB1P41-201ENST00000520234 HNRNPLLQ8WVV9 542 aaKnown RBP5.1□□□□□ -1.59
HMGB1P41-201ENST00000520234 ASB11Q8WXH4 323 aa5.1□□□□□ -1.59
HMGB1P41-201ENST00000520234 TRIM55Q9BYV6 548 aa5.1□□□□□ -1.59
HMGB1P41-201ENST00000520234 GPR62Q9BZJ7 368 aa5.1□□□□□ -1.59
HMGB1P41-201ENST00000520234 ST14Q9Y5Y6 855 aa5.1□□□□□ -1.59
HMGB1P41-201ENST00000520234 U3KQE9 123 aa5.1□□□□□ -1.59
HMGB1P41-201ENST00000520234 C9IYK1 514 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 LRRN2O75325 713 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 NAT2P11245 290 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 SRFP11831 508 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 GLDCP23378 1020 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 ZNF143P52747 638 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 LINC00310P59036 64 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 TCEAL1Q15170 157 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 AXDND1Q5T1B0 1012 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 CDKAL1Q5VV42 579 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 LARP1BQ659C4 914 aaKnown RBP5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 PPFIBP1Q86W92 1011 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 FAM178BQ8IXR5 827 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 CXorf38Q8TB03 319 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 KLHL6Q8WZ60 621 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 ZNF512BQ96KM6 892 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 HSPA12BQ96MM6 686 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 DUSP15Q9H1R2 295 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 SIRPGQ9P1W8 387 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 PCDHB12Q9Y5F1 795 aa5.09□□□□□ -1.59
HMGB1P41-201ENST00000520234 PITPNM2Q9BZ72 1349 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 A0A087WZG4 1122 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 DDAH1O94760 285 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 TP53P04637 393 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 NMIQ13287 307 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 CLEC16AQ2KHT3 1053 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 SKOR2Q2VWA4 1001 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 TMEM67Q5HYA8 995 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 FYB2Q5VWT5 728 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 TDRD10Q5VZ19 366 aaKnown RBP5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 HEATR6Q6AI08 1181 aaKnown RBP5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 KIAA1211LQ6NV74 962 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 TMPRSS7Q7RTY8 843 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 DAGLBQ8NCG7 672 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 SYTL5Q8TDW5 730 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 HAUS7Q99871 368 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 PRDM14Q9GZV8 571 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 GBP3Q9H0R5 595 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 NSUN3Q9H649 340 aaKnown RBP5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 SEMA3GQ9NS98 782 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 RTEL1Q9NZ71 1219 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 FBXL21Q9UKT6 434 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 PCDHB10Q9UN67 800 aa5.08□□□□□ -1.6
HMGB1P41-201ENST00000520234 ANKRD34BA5PLL1 514 aa5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 H3BS24 57 aa5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 SIGLEC6O43699 453 aa5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 CD247P20963 164 aa5.07□□□□□ -1.6
HMGB1P41-201ENST00000520234 DDR2Q16832 855 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms