RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 UBA5Q9GZZ9 404 aa20.69■□□□□ 0.9
SDC2-205ENST00000520233 WDR33Q9C0J8 1336 aaKnown RBP20.69■□□□□ 0.9
SDC2-205ENST00000520233 FLOT1O75955 427 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 OSBPP22059 807 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 SLC16A2P36021 539 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 TM4SF4P48230 202 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 VEGFBP49765 207 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 FUT2Q10981 343 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 COG2Q14746 738 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 NTRK3Q16288 839 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 SYDE2Q5VT97 1194 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 NBPF11Q86T75 865 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 CCDC83Q8IWF9 413 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 PRPF38AQ8NAV1 312 aaKnown RBP20.68■□□□□ 0.9
SDC2-205ENST00000520233 ZIC5Q96T25 663 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 SLF1Q9BQI6 1058 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 SPZ1Q9BXG8 430 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 RIOX1Q9H6W3 641 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 ZCCHC17Q9NP64 241 aaKnown RBP20.68■□□□□ 0.9
SDC2-205ENST00000520233 FBXO28Q9NVF7 368 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 MYPNQ86TC9 1320 aa20.68■□□□□ 0.9
SDC2-205ENST00000520233 PDHXO00330 501 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 AOC2O75106 756 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 CDKL5O76039 1030 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 IFNAR1P17181 557 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 DSG3P32926 999 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 ANP32AP39687 249 aaKnown RBP20.67■□□□□ 0.9
SDC2-205ENST00000520233 IRX3P78415 501 aaPredicted RBP20.67■□□□□ 0.9
SDC2-205ENST00000520233 CUL4AQ13619 759 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 BECN1Q14457 450 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 SLC35G1Q2M3R5 365 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 ADGRF4Q8IZF3 695 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 CMTR1Q8N1G2 835 aaKnown RBP20.67■□□□□ 0.9
SDC2-205ENST00000520233 FAM43AQ8N2R8 423 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 ASCC2Q9H1I8 757 aaPredicted RBP20.67■□□□□ 0.9
SDC2-205ENST00000520233 CPVLQ9H3G5 476 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 HOXC10Q9NYD6 342 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 PNMA3Q9UL41 463 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 PPP1R9AQ9ULJ8 1098 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 PRR12Q9ULL5 1215 aa20.67■□□□□ 0.9
SDC2-205ENST00000520233 CYTH3O43739 400 aa20.66■□□□□ 0.9
SDC2-205ENST00000520233 MAP2K2P36507 400 aa20.66■□□□□ 0.9
SDC2-205ENST00000520233 OTUD7BQ6GQQ9 843 aa20.66■□□□□ 0.9
SDC2-205ENST00000520233 IFNL1Q8IU54 200 aa20.66■□□□□ 0.9
SDC2-205ENST00000520233 KIFC2Q96AC6 838 aa20.66■□□□□ 0.9
SDC2-205ENST00000520233 LLPHQ9BRT6 129 aaKnown RBP20.66■□□□□ 0.9
SDC2-205ENST00000520233 CNTNAP5Q8WYK1 1306 aa20.65■□□□□ 0.9
SDC2-205ENST00000520233 IGF2BP3O00425 579 aaKnown RBP eCLIP20.65■□□□□ 0.9
SDC2-205ENST00000520233 CTDNEP1O95476 244 aa20.65■□□□□ 0.9
SDC2-205ENST00000520233 FDX1P10109 184 aa20.65■□□□□ 0.9
SDC2-205ENST00000520233 CCDC82Q8N4S0 544 aa20.65■□□□□ 0.9
SDC2-205ENST00000520233 MTMR8Q96EF0 704 aa20.65■□□□□ 0.9
SDC2-205ENST00000520233 JMJD4Q9H9V9 463 aa20.65■□□□□ 0.9
SDC2-205ENST00000520233 VAT1LQ9HCJ6 419 aa20.65■□□□□ 0.9
SDC2-205ENST00000520233 ADAMTS5Q9UNA0 930 aa20.65■□□□□ 0.9
SDC2-205ENST00000520233 SPDYE16A6NNV3 312 aaPredicted RBP20.64■□□□□ 0.89
SDC2-205ENST00000520233 LBX2Q6XYB7 198 aa20.64■□□□□ 0.89
SDC2-205ENST00000520233 NSUN7Q8NE18 718 aaKnown RBP20.64■□□□□ 0.89
SDC2-205ENST00000520233 ATG4CQ96DT6 458 aa20.64■□□□□ 0.89
SDC2-205ENST00000520233 P2RX7Q99572 595 aaKnown RBP20.64■□□□□ 0.89
SDC2-205ENST00000520233 RNF26Q9BY78 433 aaPredicted RBP20.64■□□□□ 0.89
SDC2-205ENST00000520233 PRPF3O43395 683 aaKnown RBP20.63■□□□□ 0.89
SDC2-205ENST00000520233 FMNL1O95466 1100 aaPredicted RBP20.63■□□□□ 0.89
SDC2-205ENST00000520233 HERVK_113P62684 666 aa20.63■□□□□ 0.89
SDC2-205ENST00000520233 SSRP1Q08945 709 aaKnown RBP20.63■□□□□ 0.89
SDC2-205ENST00000520233 SAMD1Q6SPF0 538 aaPredicted RBP20.63■□□□□ 0.89
SDC2-205ENST00000520233 GTF3C2Q8WUA4 911 aaPredicted RBP20.63■□□□□ 0.89
SDC2-205ENST00000520233 PHKBQ93100 1093 aa20.63■□□□□ 0.89
SDC2-205ENST00000520233 RRP36Q96EU6 259 aaKnown RBP20.63■□□□□ 0.89
SDC2-205ENST00000520233 PARK7Q99497 189 aaKnown RBP20.63■□□□□ 0.89
SDC2-205ENST00000520233 RANBP17Q9H2T7 1088 aaKnown RBP20.63■□□□□ 0.89
SDC2-205ENST00000520233 RBM27Q9P2N5 1060 aaKnown RBP20.63■□□□□ 0.89
SDC2-205ENST00000520233 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.63■□□□□ 0.89
SDC2-205ENST00000520233 STK36Q9NRP7 1315 aa20.62■□□□□ 0.89
SDC2-205ENST00000520233 PTPDC1A2A3K4 754 aa20.62■□□□□ 0.89
SDC2-205ENST00000520233 VWA5AO00534 786 aa20.62■□□□□ 0.89
SDC2-205ENST00000520233 ZBED4O75132 1171 aa20.62■□□□□ 0.89
SDC2-205ENST00000520233 TRIM22Q8IYM9 498 aa20.62■□□□□ 0.89
SDC2-205ENST00000520233 SMARCC2Q8TAQ2 1214 aa20.62■□□□□ 0.89
SDC2-205ENST00000520233 INTS4Q96HW7 963 aaKnown RBP20.62■□□□□ 0.89
SDC2-205ENST00000520233 PIGSQ96S52 555 aa20.62■□□□□ 0.89
SDC2-205ENST00000520233 SLC26A6Q9BXS9 759 aa20.62■□□□□ 0.89
SDC2-205ENST00000520233 SLC38A10Q9HBR0 1119 aa20.62■□□□□ 0.89
SDC2-205ENST00000520233 V9GY48 417 aaPredicted RBP20.62■□□□□ 0.89
SDC2-205ENST00000520233 RLFQ13129 1914 aa20.61■□□□□ 0.89
SDC2-205ENST00000520233 PNMA6FA0A0J9YX94 578 aa20.61■□□□□ 0.89
SDC2-205ENST00000520233 ZBTB5O15062 677 aa20.61■□□□□ 0.89
SDC2-205ENST00000520233 ALDH1A1P00352 501 aa20.61■□□□□ 0.89
SDC2-205ENST00000520233 CYP2C8P10632 490 aa20.61■□□□□ 0.89
SDC2-205ENST00000520233 AKAP17AQ02040 695 aaKnown RBP20.61■□□□□ 0.89
SDC2-205ENST00000520233 CDC37Q16543 378 aaPredicted RBP20.61■□□□□ 0.89
SDC2-205ENST00000520233 MB21D1Q8N884 522 aa20.61■□□□□ 0.89
SDC2-205ENST00000520233 SEC63Q9UGP8 760 aaKnown RBP20.61■□□□□ 0.89
SDC2-205ENST00000520233 CTDP1Q9Y5B0 961 aaPredicted RBP20.61■□□□□ 0.89
SDC2-205ENST00000520233 PARP14Q460N5 1801 aa20.61■□□□□ 0.89
SDC2-205ENST00000520233 THSD7BQ9C0I4 1608 aa20.6■□□□□ 0.89
SDC2-205ENST00000520233 JAK2O60674 1132 aa20.6■□□□□ 0.89
SDC2-205ENST00000520233 PPFIA3O75145 1194 aa20.6■□□□□ 0.89
SDC2-205ENST00000520233 HMGN5P82970 282 aaKnown RBP20.6■□□□□ 0.89
SDC2-205ENST00000520233 TAF1CQ15572 869 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms