RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 TEFQ10587 303 aa5.49□□□□□ -1.53
PABPC1-212ENST00000519622 RABL6Q3YEC7 729 aaPredicted RBP5.49□□□□□ -1.53
PABPC1-212ENST00000519622 FBXO11Q86XK2 927 aa5.49□□□□□ -1.53
PABPC1-212ENST00000519622 LINS1Q8NG48 757 aa5.49□□□□□ -1.53
PABPC1-212ENST00000519622 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
PABPC1-212ENST00000519622 BICC1Q9H694 974 aaKnown RBP5.49□□□□□ -1.53
PABPC1-212ENST00000519622 USP21Q9UK80 565 aa5.49□□□□□ -1.53
PABPC1-212ENST00000519622 USP16Q9Y5T5 823 aa5.49□□□□□ -1.53
PABPC1-212ENST00000519622 ROBO1Q9Y6N7 1651 aa5.49□□□□□ -1.53
PABPC1-212ENST00000519622 WDR17Q8IZU2 1322 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 ZNF335Q9H4Z2 1342 aaPredicted RBP5.48□□□□□ -1.53
PABPC1-212ENST00000519622 DOT1LQ8TEK3 1739 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 A0A1B0GUL6 1792 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 COL4A1P02462 1669 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 METTL12A8MUP2 240 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 GRM8O00222 908 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 SRGAP3O43295 1099 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 GADD45BO75293 160 aaPredicted RBP5.48□□□□□ -1.53
PABPC1-212ENST00000519622 SMNDC1O75940 238 aaKnown RBP eCLIP5.48□□□□□ -1.53
PABPC1-212ENST00000519622 BAG4O95429 457 aaKnown RBP5.48□□□□□ -1.53
PABPC1-212ENST00000519622 LDHBP07195 334 aaKnown RBP5.48□□□□□ -1.53
PABPC1-212ENST00000519622 HSP90AB1P08238 724 aaKnown RBP5.48□□□□□ -1.53
PABPC1-212ENST00000519622 XRCC6P12956 609 aaKnown RBP eCLIP5.48□□□□□ -1.53
PABPC1-212ENST00000519622 ANAPC15P60006 121 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 TAGLNQ01995 201 aaKnown RBP5.48□□□□□ -1.53
PABPC1-212ENST00000519622 EAPPQ56P03 285 aaPredicted RBP5.48□□□□□ -1.53
PABPC1-212ENST00000519622 C1orf141Q5JVX7 400 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 XAGE3Q8WTP9 111 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 WFDC12Q8WWY7 111 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 TTC9Q92623 222 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 TP53INP1Q96A56 240 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 EAF2Q96CJ1 260 aaPredicted RBP5.48□□□□□ -1.53
PABPC1-212ENST00000519622 KIF1BPQ96EK5 621 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 POP1Q99575 1024 aaKnown RBP5.48□□□□□ -1.53
PABPC1-212ENST00000519622 PANK2Q9BZ23 570 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 LIN7BQ9HAP6 207 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 LMBRD1Q9NUN5 540 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 RNF19AQ9NV58 838 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 HYPKQ9NX55 129 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 PODXL2Q9NZ53 605 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 TAF6LQ9Y6J9 622 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 SPEF2Q9C093 1822 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 LTBP4Q8N2S1 1624 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 ZNF609O15014 1411 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 TTC41PQ6P2S7 1318 aa5.48□□□□□ -1.53
PABPC1-212ENST00000519622 LAMB2P55268 1798 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 CASZ1Q86V15 1759 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 PDE2AO00408 941 aaPredicted RBP5.47□□□□□ -1.53
PABPC1-212ENST00000519622 SURF6O75683 361 aaKnown RBP5.47□□□□□ -1.53
PABPC1-212ENST00000519622 REC8O95072 547 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 LARGE1O95461 756 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 MAP4K4O95819 1239 aaPredicted RBP5.47□□□□□ -1.53
PABPC1-212ENST00000519622 H2AFB1P0C5Y9 115 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 H2AFB2P0C5Z0 115 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 NOS3P29474 1203 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 CDC25BP30305 580 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 IREB2P48200 963 aaKnown RBP5.47□□□□□ -1.53
PABPC1-212ENST00000519622 PIP4K2AP48426 406 aaPredicted RBP5.47□□□□□ -1.53
PABPC1-212ENST00000519622 ATP2B2Q01814 1243 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 PTH1RQ03431 593 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 GCKRQ14397 625 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.47□□□□□ -1.53
PABPC1-212ENST00000519622 FBXO33Q7Z6M2 555 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 WFDC8Q8IUA0 241 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 TMEM102Q8N9M5 508 aaPredicted RBP5.47□□□□□ -1.53
PABPC1-212ENST00000519622 ASAP3Q8TDY4 903 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 TMX3Q96JJ7 454 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 TCF12Q99081 682 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 METTL22Q9BUU2 404 aaPredicted RBP5.47□□□□□ -1.53
PABPC1-212ENST00000519622 EHD4Q9H223 541 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 SNX14Q9Y5W7 946 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 RIC1Q4ADV7 1423 aa5.47□□□□□ -1.53
PABPC1-212ENST00000519622 RFX7Q2KHR2 1363 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 ATF3P18847 181 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 EPHA1P21709 976 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 FOXO4P98177 505 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 PTPN12Q05209 780 aaKnown RBP5.46□□□□□ -1.54
PABPC1-212ENST00000519622 GRM2Q14416 872 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 KIAA0319Q5VV43 1072 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 ALG1LQ6GMV1 187 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 TXNDC11Q6PKC3 985 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 RUFY3Q7L099 469 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 COPS6Q7L5N1 327 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 IFNL2Q8IZJ0 200 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 DTWD1Q8N5C7 304 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 IL22RA1Q8N6P7 574 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 KLHDC4Q8TBB5 520 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 GPT2Q8TD30 523 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 NXPE3Q969Y0 559 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 COPRSQ9NQ92 184 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 RRAGDQ9NQL2 400 aaPredicted RBP5.46□□□□□ -1.54
PABPC1-212ENST00000519622 SH2B1Q9NRF2 756 aaPredicted RBP5.46□□□□□ -1.54
PABPC1-212ENST00000519622 NLRP2Q9NX02 1062 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 BCORQ6W2J9 1755 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 AKAP11Q9UKA4 1901 aa5.46□□□□□ -1.54
PABPC1-212ENST00000519622 COL5A3P25940 1745 aaPredicted RBP5.45□□□□□ -1.54
PABPC1-212ENST00000519622 MYH15Q9Y2K3 1946 aa5.45□□□□□ -1.54
PABPC1-212ENST00000519622 A0A0D9SFI3 127 aa5.45□□□□□ -1.54
PABPC1-212ENST00000519622 SCO2A0A1W2PP80 73 aa5.45□□□□□ -1.54
PABPC1-212ENST00000519622 DLL1O00548 723 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms