RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, human

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCUBE2-205	ENST00000519535	PTH1R	Q03431	593 aa		16.05	■□□□□ 0.16
SCUBE2-205	ENST00000519535	STAG1	Q8WVM7	1258 aa		16.05	■□□□□ 0.16
SCUBE2-205	ENST00000519535	TMEM47	Q9BQJ4	181 aa		16.05	■□□□□ 0.16
SCUBE2-205	ENST00000519535	SLC38A10	Q9HBR0	1119 aa		16.05	■□□□□ 0.16
SCUBE2-205	ENST00000519535	ZNF287	Q9HBT7	754 aa		16.05	■□□□□ 0.16
SCUBE2-205	ENST00000519535	CWC22	Q9HCG8	908 aa	Known RBP	16.05	■□□□□ 0.16
SCUBE2-205	ENST00000519535	STX8	Q9UNK0	236 aa		16.05	■□□□□ 0.16
SCUBE2-205	ENST00000519535	DDX49	Q9Y6V7	483 aa	Known RBP	16.05	■□□□□ 0.16
SCUBE2-205	ENST00000519535	SZT2	Q5T011	3432 aa		16.04	■□□□□ 0.16
SCUBE2-205	ENST00000519535	CHML	P26374	656 aa		16.04	■□□□□ 0.16
SCUBE2-205	ENST00000519535	COL9A3	Q14050	684 aa	Predicted RBP	16.04	■□□□□ 0.16
SCUBE2-205	ENST00000519535	ZNF792	Q3KQV3	632 aa		16.04	■□□□□ 0.16
SCUBE2-205	ENST00000519535	AKNAD1	Q5T1N1	836 aa		16.04	■□□□□ 0.16
SCUBE2-205	ENST00000519535	ANO1	Q5XXA6	986 aa		16.04	■□□□□ 0.16
SCUBE2-205	ENST00000519535	SNRNP48	Q6IEG0	339 aa	Known RBP	16.04	■□□□□ 0.16
SCUBE2-205	ENST00000519535	CPXCR1	Q8N123	301 aa		16.04	■□□□□ 0.16
SCUBE2-205	ENST00000519535	GMCL1	Q96IK5	515 aa		16.04	■□□□□ 0.16
SCUBE2-205	ENST00000519535	ZKSCAN3	Q9BRR0	538 aa		16.04	■□□□□ 0.16
SCUBE2-205	ENST00000519535	MROH8	Q9H579	483 aa		16.04	■□□□□ 0.16
SCUBE2-205	ENST00000519535	TOMM22	Q9NS69	142 aa		16.04	■□□□□ 0.16
SCUBE2-205	ENST00000519535	PFAS	O15067	1338 aa		16.03	■□□□□ 0.16
SCUBE2-205	ENST00000519535	CYBA	P13498	195 aa		16.03	■□□□□ 0.16
SCUBE2-205	ENST00000519535	SLC4A3	P48751	1232 aa		16.03	■□□□□ 0.16
SCUBE2-205	ENST00000519535	DPP9	Q86TI2	863 aa		16.03	■□□□□ 0.16
SCUBE2-205	ENST00000519535	PRPF38A	Q8NAV1	312 aa	Known RBP	16.03	■□□□□ 0.16
SCUBE2-205	ENST00000519535	MAML3	Q96JK9	1138 aa		16.03	■□□□□ 0.16
SCUBE2-205	ENST00000519535	AGBL1	Q96MI9	1066 aa		16.03	■□□□□ 0.16
SCUBE2-205	ENST00000519535	MMP19	Q99542	508 aa		16.03	■□□□□ 0.16
SCUBE2-205	ENST00000519535	FEM1B	Q9UK73	627 aa		16.03	■□□□□ 0.16
SCUBE2-205	ENST00000519535	SYNPO2	Q9UMS6	1093 aa		16.03	■□□□□ 0.16
SCUBE2-205	ENST00000519535	IVNS1ABP	Q9Y6Y0	642 aa		16.03	■□□□□ 0.16
SCUBE2-205	ENST00000519535	STRN	O43815	780 aa		16.02	■□□□□ 0.16
SCUBE2-205	ENST00000519535	SLC16A2	P36021	539 aa		16.02	■□□□□ 0.16
SCUBE2-205	ENST00000519535	OLFML2B	Q68BL8	750 aa		16.02	■□□□□ 0.16
SCUBE2-205	ENST00000519535	ABRA	Q8N0Z2	381 aa		16.02	■□□□□ 0.16
SCUBE2-205	ENST00000519535	TEX13B	Q9BXU2	312 aa		16.02	■□□□□ 0.16
SCUBE2-205	ENST00000519535	CPVL	Q9H3G5	476 aa		16.02	■□□□□ 0.16
SCUBE2-205	ENST00000519535	TCP11L1	Q9NUJ3	509 aa		16.02	■□□□□ 0.16
SCUBE2-205	ENST00000519535	COL11A1	P12107	1806 aa	Predicted RBP	16.02	■□□□□ 0.16
SCUBE2-205	ENST00000519535	ZNF236	Q9UL36	1845 aa		16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	FRMPD2	Q68DX3	1309 aa	Predicted RBP	16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	DNAJC25-GNG10	A0A024R161	153 aa		16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535		B4E1Z4	1266 aa		16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	ATP2A1	O14983	1001 aa		16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	SLC25A27	O95847	323 aa		16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	FCER1A	P12319	257 aa		16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	SLC1A4	P43007	532 aa		16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	MFSD14C	Q5VZR4	134 aa		16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	MFSD6	Q6ZSS7	791 aa		16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	TRMT44	Q8IYL2	757 aa	Known RBP	16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	LENG1	Q96BZ8	264 aa	Predicted RBP	16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	PURB	Q96QR8	312 aa	Known RBP	16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	DSCC1	Q9BVC3	393 aa		16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	PRR12	Q9ULL5	1215 aa		16.01	■□□□□ 0.15
SCUBE2-205	ENST00000519535	ASTN1	O14525	1302 aa		16	■□□□□ 0.15
SCUBE2-205	ENST00000519535	KDM4A	O75164	1064 aa		16	■□□□□ 0.15
SCUBE2-205	ENST00000519535	COL6A1	P12109	1028 aa		16	■□□□□ 0.15
SCUBE2-205	ENST00000519535	CCDC174	Q6PII3	467 aa		16	■□□□□ 0.15
SCUBE2-205	ENST00000519535	STOX1	Q6ZVD7	989 aa		16	■□□□□ 0.15
SCUBE2-205	ENST00000519535	CYB5R4	Q7L1T6	521 aa		16	■□□□□ 0.15
SCUBE2-205	ENST00000519535	HOMER2	Q9NSB8	354 aa		16	■□□□□ 0.15
SCUBE2-205	ENST00000519535	DDX20	Q9UHI6	824 aa	Known RBP	16	■□□□□ 0.15
SCUBE2-205	ENST00000519535	MYH4	Q9Y623	1939 aa		16	■□□□□ 0.15
SCUBE2-205	ENST00000519535	ZNF213	O14771	459 aa		15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	ZBED4	O75132	1171 aa		15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	SNAI1	O95863	264 aa	Predicted RBP	15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	SNHG28	P0DPA3	235 aa		15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	PDHB	P11177	359 aa		15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	TOP1	P11387	765 aa	Known RBP	15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	PTGS1	P23219	599 aa		15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	IRX5	P78411	483 aa	Predicted RBP	15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	MUM1L1	Q5H9M0	696 aa		15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	DPF3	Q92784	378 aa		15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	SENP2	Q9HC62	589 aa		15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	GPCPD1	Q9NPB8	672 aa		15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	ZSWIM5	Q9P217	1185 aa		15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	ISY1	Q9ULR0	285 aa	Known RBP	15.99	■□□□□ 0.15
SCUBE2-205	ENST00000519535	HIP1	O00291	1037 aa		15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	SGSM2	O43147	1006 aa		15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	ADCY6	O43306	1168 aa		15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	PLA2G6	O60733	806 aa		15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	CYP21A2	P08686	494 aa		15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	ZNF865	P0CJ78	1059 aa	Predicted RBP	15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	GOLGA8H	P0CJ92	632 aa		15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	CNGA1	P29973	690 aa		15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	STAT2	P52630	851 aa		15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	CNTN2	Q02246	1040 aa		15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	CCDC96	Q2M329	555 aa		15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	ENAH	Q8N8S7	591 aa	Predicted RBP	15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	COLQ	Q9Y215	455 aa	Predicted RBP	15.98	■□□□□ 0.15
SCUBE2-205	ENST00000519535	MFAP1	P55081	439 aa	Known RBP	15.97	■□□□□ 0.15
SCUBE2-205	ENST00000519535	ZNF543	Q08ER8	600 aa		15.97	■□□□□ 0.15
SCUBE2-205	ENST00000519535	KCTD2	Q14681	263 aa		15.97	■□□□□ 0.15
SCUBE2-205	ENST00000519535	LRRC26	Q2I0M4	334 aa		15.97	■□□□□ 0.15
SCUBE2-205	ENST00000519535	SLC35G1	Q2M3R5	365 aa		15.97	■□□□□ 0.15
SCUBE2-205	ENST00000519535	BTNL9	Q6UXG8	535 aa		15.97	■□□□□ 0.15
SCUBE2-205	ENST00000519535	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	15.97	■□□□□ 0.15
SCUBE2-205	ENST00000519535	NECAB2	Q7Z6G3	386 aa		15.97	■□□□□ 0.15
SCUBE2-205	ENST00000519535	DCAF4	Q8WV16	495 aa		15.97	■□□□□ 0.15
SCUBE2-205	ENST00000519535	TINF2	Q9BSI4	451 aa		15.97	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms