RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 BTBD7Q9P203 1132 aa8.7□□□□□ -1.02
CTNNA1-216ENST00000519489 TSR3Q9UJK0 312 aaKnown RBP8.7□□□□□ -1.02
CTNNA1-216ENST00000519489 NUDCQ9Y266 331 aa8.7□□□□□ -1.02
CTNNA1-216ENST00000519489 MAP3K2Q9Y2U5 619 aa8.7□□□□□ -1.02
CTNNA1-216ENST00000519489 COL4A4P53420 1690 aaPredicted RBP8.69□□□□□ -1.02
CTNNA1-216ENST00000519489 DOCK1Q14185 1865 aa8.69□□□□□ -1.02
CTNNA1-216ENST00000519489 ZXDAP98168 799 aa8.69□□□□□ -1.02
CTNNA1-216ENST00000519489 KLHDC9Q8NEP7 349 aa8.69□□□□□ -1.02
CTNNA1-216ENST00000519489 SUGCTQ9HAC7 445 aa8.69□□□□□ -1.02
CTNNA1-216ENST00000519489 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTNNA1-216ENST00000519489 LMCD1Q9NZU5 365 aa8.69□□□□□ -1.02
CTNNA1-216ENST00000519489 PRKAG3Q9UGI9 489 aa8.69□□□□□ -1.02
CTNNA1-216ENST00000519489 NEURL1BA8MQ27 555 aa8.68□□□□□ -1.02
CTNNA1-216ENST00000519489 ZBBXA8MT70 800 aa8.68□□□□□ -1.02
CTNNA1-216ENST00000519489 FOXO4P98177 505 aa8.68□□□□□ -1.02
CTNNA1-216ENST00000519489 PKN1Q16512 942 aa8.68□□□□□ -1.02
CTNNA1-216ENST00000519489 WDR78Q5VTH9 848 aa8.68□□□□□ -1.02
CTNNA1-216ENST00000519489 DUSP27Q5VZP5 1158 aa8.68□□□□□ -1.02
CTNNA1-216ENST00000519489 CCAR1Q8IX12 1150 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-216ENST00000519489 NKD2Q969F2 451 aaPredicted RBP8.68□□□□□ -1.02
CTNNA1-216ENST00000519489 SCLYQ96I15 445 aa8.68□□□□□ -1.02
CTNNA1-216ENST00000519489 PUS3Q9BZE2 481 aaKnown RBP8.68□□□□□ -1.02
CTNNA1-216ENST00000519489 ANKRD18BA2A2Z9 1011 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 ADORA2AP29274 412 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 LTBRP36941 435 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 BACE1P56817 501 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 UBE4AQ14139 1066 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 PUM1Q14671 1186 aaKnown RBP eCLIP8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 COL19A1Q14993 1142 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 KCNA10Q16322 511 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 TMCO2Q7Z6W1 182 aaPredicted RBP8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 RNF180Q86T96 592 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 KIAA2013Q8IYS2 634 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 TBC1D22AQ8WUA7 517 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 CFAP53Q96M91 514 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 SMG1Q96Q15 3661 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 IDI2Q9BXS1 227 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 UPF3BQ9BZI7 483 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 MTIF3Q9H2K0 278 aaKnown RBP8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 CDHR5Q9HBB8 845 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 FRYQ5TBA9 3013 aa8.67□□□□□ -1.02
CTNNA1-216ENST00000519489 USP17L5A8MUK1 530 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 ENTPD3O75355 529 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 HOXB7P09629 217 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 ZNF865P0CJ78 1059 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 RARBP10826 455 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 PRDX5P30044 214 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 CAP2P40123 477 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 GCKRQ14397 625 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 PUS10Q3MIT2 529 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 AGBL1Q96MI9 1066 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 WDR18Q9BV38 432 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 NOC4LQ9BVI4 516 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 IRF2BPLQ9H1B7 796 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 SH2B1Q9NRF2 756 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 IGSF5Q9NSI5 407 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 MTUS1Q9ULD2 1270 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 RABGAP1Q9Y3P9 1069 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 NAV2Q8IVL1 2488 aa8.66□□□□□ -1.02
CTNNA1-216ENST00000519489 SYNRGQ9UMZ2 1314 aa8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 PI4KAP2A4QPH2 592 aa8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 ARVCFO00192 962 aa8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 KDM4AO75164 1064 aa8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 PPP2R1AP30153 589 aa8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 DLX2Q07687 328 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 SMAD2Q15796 467 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 HERC6Q8IVU3 1022 aa8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 ZSCAN29Q8IWY8 852 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 PI4KAP1Q8N8J0 262 aa8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 TSEN34Q9BSV6 310 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 HIPK3Q9H422 1215 aa8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 CWC22Q9HCG8 908 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 TSHZ2Q9NRE2 1034 aa8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 SUGT1Q9Y2Z0 365 aa8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 BPTFQ12830 3046 aa8.65□□□□□ -1.02
CTNNA1-216ENST00000519489 GRIN2DO15399 1336 aa8.64□□□□□ -1.03
CTNNA1-216ENST00000519489 ADCY6O43306 1168 aa8.64□□□□□ -1.03
CTNNA1-216ENST00000519489 GLRX3O76003 335 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-216ENST00000519489 RIPK4P57078 832 aa8.64□□□□□ -1.03
CTNNA1-216ENST00000519489 CLUL1Q15846 466 aa8.64□□□□□ -1.03
CTNNA1-216ENST00000519489 DPP9Q86TI2 863 aa8.64□□□□□ -1.03
CTNNA1-216ENST00000519489 TMEM105Q8N8V8 129 aa8.64□□□□□ -1.03
CTNNA1-216ENST00000519489 TATDN2Q93075 761 aa8.64□□□□□ -1.03
CTNNA1-216ENST00000519489 MAML3Q96JK9 1138 aa8.64□□□□□ -1.03
CTNNA1-216ENST00000519489 OSBPL5Q9H0X9 879 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-216ENST00000519489 SMCHD1A6NHR9 2005 aa8.64□□□□□ -1.03
CTNNA1-216ENST00000519489 OTOGLQ3ZCN5 2332 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 MAST3O60307 1309 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 ELP1O95163 1332 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 MYH3P11055 1940 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 SMAPO00193 183 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 CTAGE5O15320 804 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 KCNC4Q03721 635 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 IFIT5Q13325 482 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 KSR2Q6VAB6 950 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 LDHAL6AQ6ZMR3 332 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 SLC43A3Q8NBI5 491 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 TTC13Q8NBP0 860 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 NUP133Q8WUM0 1156 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 MOV10L1Q9BXT6 1211 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms