RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 ATP8A2Q9NTI2 1148 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 BCS1LQ9Y276 419 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 V9GY48 417 aaPredicted RBP11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 C10orf71Q711Q0 1435 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 KIF13BQ9NQT8 1826 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 CCDC88AQ3V6T2 1871 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 WTIPA6NIX2 430 aaPredicted RBP11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 EIF3CLB5ME19 914 aaKnown RBP11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 USP17L12C9JPN9 530 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 USP17L21D6R901 530 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 H3BQF6 201 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 KIF1CO43896 1103 aaKnown RBP11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 TOP1P11387 765 aaKnown RBP11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 KCNA3P22001 575 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 SBK1Q52WX2 424 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 TBC1D9BQ66K14 1250 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 RPAINQ86UA6 219 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 PPM1EQ8WY54 764 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 NLRP3Q96P20 1036 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 EIF3CQ99613 913 aaKnown RBP11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 VPS54Q9P1Q0 977 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 LAMB1P07942 1786 aa11.43□□□□□ -0.58
SH2D4A-204ENST00000519207 MAST2Q6P0Q8 1798 aa11.42□□□□□ -0.58
SH2D4A-204ENST00000519207 CYP2D7A0A087X1C5 515 aa11.42□□□□□ -0.58
SH2D4A-204ENST00000519207 SMIM22K7EJ46 135 aa11.42□□□□□ -0.58
SH2D4A-204ENST00000519207 HIBADHP31937 336 aaKnown RBP11.42□□□□□ -0.58
SH2D4A-204ENST00000519207 MECOMQ03112 1051 aa11.42□□□□□ -0.58
SH2D4A-204ENST00000519207 TNFRSF25Q93038 417 aa11.42□□□□□ -0.58
SH2D4A-204ENST00000519207 DCP1AQ9NPI6 582 aaPredicted RBP11.42□□□□□ -0.58
SH2D4A-204ENST00000519207 BCCIPQ9P287 314 aaKnown RBP eCLIP11.42□□□□□ -0.58
SH2D4A-204ENST00000519207 ARPP21Q9UBL0 812 aaPredicted RBP11.42□□□□□ -0.58
SH2D4A-204ENST00000519207 MKRN1Q9UHC7 482 aaKnown RBP11.42□□□□□ -0.58
SH2D4A-204ENST00000519207 NARFQ9UHQ1 456 aa11.42□□□□□ -0.58
SH2D4A-204ENST00000519207 NFE2L3Q9Y4A8 694 aa11.42□□□□□ -0.58
SH2D4A-204ENST00000519207 PLEKHA8P1O95397 391 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 TRAPPC10P48553 1259 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 PLCD1P51178 756 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 DDR1Q08345 913 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 TBX2Q13207 712 aaPredicted RBP11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 MCTP2Q6DN12 878 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 MMS22LQ6ZRQ5 1243 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 SH3RF1Q7Z6J0 888 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 CTCFLQ8NI51 663 aaPredicted RBP11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 HNRNPLLQ8WVV9 542 aaKnown RBP11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 SETDB2Q96T68 719 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 KIAA1551Q9HCM1 1747 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 MED4Q9NPJ6 270 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 INTS13Q9NVM9 706 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 CNTNAP5Q8WYK1 1306 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 PRDM1O75626 825 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 TM4SF1P30408 202 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 FMR1Q06787 632 aaKnown RBP eCLIP11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 NPY5RQ15761 445 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 SPTY2D1Q68D10 685 aaPredicted RBP11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 USP49Q70CQ1 688 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 CCDC91Q7Z6B0 441 aa11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 PYM1Q9BRP8 204 aaKnown RBP11.41□□□□□ -0.58
SH2D4A-204ENST00000519207 CCDC151A5D8V7 595 aa11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 TMEM232C9JQI7 657 aa11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 ARHGAP6O43182 974 aa11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 MAP3K9P80192 1104 aa11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 EARS2Q5JPH6 523 aaKnown RBP11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 JAKMIP3Q5VZ66 844 aa11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 BICDL1Q6ZP65 573 aa11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 ARHGAP27Q6ZUM4 889 aa11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 NBPF5PQ86XG9 351 aaPredicted RBP11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 PDILTQ8N807 584 aa11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 RABGGTAQ92696 567 aa11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 GSDMAQ96QA5 445 aa11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 CXorf56Q9H5V9 222 aa11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 ARFGAP3Q9NP61 516 aa11.4□□□□□ -0.58
SH2D4A-204ENST00000519207 FAM205CA6NFA0 338 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 POLRMTO00411 1230 aaKnown RBP11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 ZSCAN12O43309 604 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 ZPR1O75312 459 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 SCG2P13521 617 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 KLRK1P26718 216 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 KIF5BP33176 963 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 LMAN1P49257 510 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 ATP2C1P98194 919 aaPredicted RBP11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 TTC38Q5R3I4 469 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 SPECC1LQ69YQ0 1117 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 TPTE2Q6XPS3 522 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 TMEM139Q8IV31 216 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 GRAMD1CQ8IYS0 662 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 SRBD1Q8N5C6 995 aaKnown RBP11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 CEP120Q8N960 986 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 SYMPKQ92797 1274 aaKnown RBP11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 DHX58Q96C10 678 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 PAGE5Q96GU1 130 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 DRC1Q96MC2 740 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 DEF6Q9H4E7 631 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 A0A087X0B3 334 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 GOLGA6L9A6NEM1 432 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 KIF3CO14782 793 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 STX10O60499 249 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 USP5P45974 858 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 BRD3Q15059 726 aa11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 PFKFB3Q16875 520 aaPredicted RBP11.39□□□□□ -0.59
SH2D4A-204ENST00000519207 EFCAB13Q8IY85 973 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms