RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 DBNLQ9UJU6 430 aaKnown RBP15.09■□□□□ 0.01
PABPC1-208ENST00000519004 UBN2Q6ZU65 1347 aa15.09■□□□□ 0.01
PABPC1-208ENST00000519004 WASLO00401 505 aaPredicted RBP15.08■□□□□ 0.01
PABPC1-208ENST00000519004 SH2B2O14492 632 aaPredicted RBP15.08■□□□□ 0.01
PABPC1-208ENST00000519004 ANXA1P04083 346 aa15.08■□□□□ 0.01
PABPC1-208ENST00000519004 FAM163BP0C2L3 166 aa15.08■□□□□ 0.01
PABPC1-208ENST00000519004 FERP16591 822 aa15.08■□□□□ 0.01
PABPC1-208ENST00000519004 HPDP32754 393 aaPredicted RBP15.08■□□□□ 0.01
PABPC1-208ENST00000519004 MATR3P43243 847 aaKnown RBP eCLIP15.08■□□□□ 0.01
PABPC1-208ENST00000519004 KRT40Q6A162 431 aa15.08■□□□□ 0.01
PABPC1-208ENST00000519004 NFXL1Q6ZNB6 911 aa15.08■□□□□ 0.01
PABPC1-208ENST00000519004 PALLDQ8WX93 1383 aa15.08■□□□□ 0.01
PABPC1-208ENST00000519004 TMEM131LA2VDJ0 1609 aa15.08■□□□□ 0
PABPC1-208ENST00000519004 MLH3Q9UHC1 1453 aa15.08■□□□□ 0
PABPC1-208ENST00000519004 CPLX1O14810 134 aa15.08■□□□□ 0
PABPC1-208ENST00000519004 DIAPH2O60879 1101 aa15.08■□□□□ 0
PABPC1-208ENST00000519004 GCLCP48506 637 aaPredicted RBP15.08■□□□□ 0
PABPC1-208ENST00000519004 WDR59Q6PJI9 974 aa15.08■□□□□ 0
PABPC1-208ENST00000519004 KLHDC4Q8TBB5 520 aa15.08■□□□□ 0
PABPC1-208ENST00000519004 NUP133Q8WUM0 1156 aa15.08■□□□□ 0
PABPC1-208ENST00000519004 ALG1Q9BT22 464 aa15.08■□□□□ 0
PABPC1-208ENST00000519004 VPS16Q9H269 839 aa15.08■□□□□ 0
PABPC1-208ENST00000519004 TMBIM4Q9HC24 238 aa15.08■□□□□ 0
PABPC1-208ENST00000519004 PAPOLBQ9NRJ5 636 aaKnown RBP15.08■□□□□ 0
PABPC1-208ENST00000519004 BCL9LQ86UU0 1499 aa15.08■□□□□ 0
PABPC1-208ENST00000519004 LRRC10BA6NIK2 292 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 BACH1O14867 736 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 GNAT1P11488 350 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 CARSP49589 748 aaKnown RBP15.07■□□□□ 0
PABPC1-208ENST00000519004 VAV2P52735 878 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 COPB1P53618 953 aaKnown RBP15.07■□□□□ 0
PABPC1-208ENST00000519004 PDIA5Q14554 519 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 DDX46Q7L014 1031 aaKnown RBP15.07■□□□□ 0
PABPC1-208ENST00000519004 ARFGAP2Q8N6H7 521 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 ALS2CR12Q96Q35 445 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 SMARCAL1Q9NZC9 954 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 DUSP10Q9Y6W6 482 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 PPP1R3GB7ZBB8 358 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 ALADP13716 330 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 ATP4AP20648 1035 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 KRT83P78385 493 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 DPYDQ12882 1025 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 CCDC63Q8NA47 563 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 B4GALNT2Q8NHY0 566 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 NUDT16Q96DE0 195 aaKnown RBP15.07■□□□□ 0
PABPC1-208ENST00000519004 DNAJC7Q99615 494 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 GDF3Q9NR23 364 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 ZFATQ9P243 1243 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 FBXO2Q9UK22 296 aaPredicted RBP15.07■□□□□ 0
PABPC1-208ENST00000519004 NFU1Q9UMS0 254 aa15.07■□□□□ 0
PABPC1-208ENST00000519004 TTC26A0AVF1 554 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 HSPD1P10809 573 aaKnown RBP15.06■□□□□ 0
PABPC1-208ENST00000519004 PPARDQ03181 441 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 CWF19L2Q2TBE0 894 aaKnown RBP15.06■□□□□ 0
PABPC1-208ENST00000519004 C1QTNF12Q5T7M4 302 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 SMYD4Q8IYR2 804 aaPredicted RBP15.06■□□□□ 0
PABPC1-208ENST00000519004 EPAS1Q99814 870 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 KCNMB3Q9NPA1 279 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 PANK4Q9NVE7 773 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 TAB2Q9NYJ8 693 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 RGL1Q9NZL6 768 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 SLC12A4Q9UP95 1085 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 CCDC9Q9Y3X0 531 aaKnown RBP15.06■□□□□ 0
PABPC1-208ENST00000519004 MYO5AQ9Y4I1 1855 aaKnown RBP15.06■□□□□ 0
PABPC1-208ENST00000519004 COBLO75128 1261 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 CLTAP09496 248 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 PYGBP11216 843 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 CDC37Q16543 378 aaPredicted RBP15.06■□□□□ 0
PABPC1-208ENST00000519004 ARMC9Q7Z3E5 817 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 TSC22D3Q99576 134 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 HAUS7Q99871 368 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 CHCHD3Q9NX63 227 aaKnown RBP15.06■□□□□ 0
PABPC1-208ENST00000519004 EHD2Q9NZN4 543 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 TSPOAP1O95153 1857 aa15.06■□□□□ 0
PABPC1-208ENST00000519004 MACROD2A1Z1Q3 448 aa15.05■□□□□ 0
PABPC1-208ENST00000519004 PPFIA2O75334 1257 aa15.05■□□□□ 0
PABPC1-208ENST00000519004 PAEPP09466 180 aa15.05■□□□□ 0
PABPC1-208ENST00000519004 PTPREP23469 700 aa15.05■□□□□ 0
PABPC1-208ENST00000519004 TMOD1P28289 359 aa15.05■□□□□ 0
PABPC1-208ENST00000519004 PAK2Q13177 524 aa15.05■□□□□ 0
PABPC1-208ENST00000519004 KANK3Q6NY19 840 aa15.05■□□□□ 0
PABPC1-208ENST00000519004 C8orf74Q6P047 294 aa15.05■□□□□ 0
PABPC1-208ENST00000519004 MTHFD1LQ6UB35 978 aa15.05■□□□□ 0
PABPC1-208ENST00000519004 SPATA21Q7Z572 469 aa15.05■□□□□ 0
PABPC1-208ENST00000519004 RAPGEF5Q92565 580 aa15.05■□□□□ 0
PABPC1-208ENST00000519004 RIMBP3CA6NJZ7 1639 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 RIMBP3BA6NNM3 1639 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 RIMBP3Q9UFD9 1639 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 CCT8L1PA6NM43 557 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 B4DLN1 442 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 TRIM37O94972 964 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 KIF4AO95239 1232 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 GLI1P08151 1106 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 GSTA1P08263 222 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 DRD4P21917 467 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 CTCFP49711 727 aaPredicted RBP15.05■□□□□ -0
PABPC1-208ENST00000519004 ZNF268Q14587 947 aaPredicted RBP15.05■□□□□ -0
PABPC1-208ENST00000519004 GNPTABQ3T906 1256 aa15.05■□□□□ -0
PABPC1-208ENST00000519004 GKAP1Q5VSY0 366 aaPredicted RBP15.05■□□□□ -0
PABPC1-208ENST00000519004 PNMA8AQ86V59 439 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms