RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 RASGRP2Q7LDG7 609 aa17.28■□□□□ 0.36
TRAPPC9-205ENST00000518839 HOMER1Q86YM7 354 aa17.28■□□□□ 0.36
TRAPPC9-205ENST00000518839 ADGRF4Q8IZF3 695 aa17.28■□□□□ 0.36
TRAPPC9-205ENST00000518839 OXER1Q8TDS5 423 aa17.28■□□□□ 0.36
TRAPPC9-205ENST00000518839 GPKOWQ92917 476 aaPredicted RBP eCLIP17.28■□□□□ 0.36
TRAPPC9-205ENST00000518839 TNFRSF25Q93038 417 aa17.28■□□□□ 0.36
TRAPPC9-205ENST00000518839 MTMR8Q96EF0 704 aa17.28■□□□□ 0.36
TRAPPC9-205ENST00000518839 PGBD1Q96JS3 809 aa17.28■□□□□ 0.36
TRAPPC9-205ENST00000518839 FTOQ9C0B1 505 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRAPPC9-205ENST00000518839 ZMYND12Q9H0C1 365 aa17.28■□□□□ 0.36
TRAPPC9-205ENST00000518839 VAT1LQ9HCJ6 419 aa17.28■□□□□ 0.36
TRAPPC9-205ENST00000518839 GGA3Q9NZ52 723 aa17.28■□□□□ 0.36
TRAPPC9-205ENST00000518839 ASTN2O75129 1339 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 SCN4AP35499 1836 aa17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 ZBTB5O15062 677 aa17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 RAD21O60216 631 aa17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 ZNF445P59923 1031 aa17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 ZSCAN23Q3MJ62 389 aa17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 SUPT20HL1Q3ZLR7 823 aa17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 BTNL9Q6UXG8 535 aa17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 KCTD1Q719H9 257 aa17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 L3MBTL3Q96JM7 780 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 GLT8D2Q9H1C3 349 aa17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 VCPKMTQ9H867 229 aa17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 JMJD4Q9H9V9 463 aa17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 DDX19AQ9NUU7 478 aaKnown RBP17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 TMEM63CQ9P1W3 806 aa17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 POLR2AP24928 1970 aaKnown RBP17.27■□□□□ 0.36
TRAPPC9-205ENST00000518839 TRIM75PA6NK02 468 aa17.26■□□□□ 0.35
TRAPPC9-205ENST00000518839 TRAF1Q13077 416 aa17.26■□□□□ 0.35
TRAPPC9-205ENST00000518839 PTPAQ15257 358 aa17.26■□□□□ 0.35
TRAPPC9-205ENST00000518839 NBPF12Q5TAG4 269 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-205ENST00000518839 CCDC73Q6ZRK6 1079 aa17.26■□□□□ 0.35
TRAPPC9-205ENST00000518839 CPVLQ9H3G5 476 aa17.26■□□□□ 0.35
TRAPPC9-205ENST00000518839 PCDHA7Q9UN72 937 aa17.26■□□□□ 0.35
TRAPPC9-205ENST00000518839 CCDC194A0A1B0GVG4 234 aa17.25■□□□□ 0.35
TRAPPC9-205ENST00000518839 A0A1W2PRG0 241 aa17.25■□□□□ 0.35
TRAPPC9-205ENST00000518839 SMCO2A6NFE2 343 aa17.25■□□□□ 0.35
TRAPPC9-205ENST00000518839 PLA2G6O60733 806 aa17.25■□□□□ 0.35
TRAPPC9-205ENST00000518839 VEGFAP15692 232 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC9-205ENST00000518839 TOB1P50616 345 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC9-205ENST00000518839 HIRAP54198 1017 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC9-205ENST00000518839 TTBK2Q6IQ55 1244 aa17.25■□□□□ 0.35
TRAPPC9-205ENST00000518839 KRT25Q7Z3Z0 450 aa17.25■□□□□ 0.35
TRAPPC9-205ENST00000518839 MRPS27Q92552 414 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-205ENST00000518839 ZNF112Q9UJU3 913 aa17.25■□□□□ 0.35
TRAPPC9-205ENST00000518839 M0R2N6 131 aa17.24■□□□□ 0.35
TRAPPC9-205ENST00000518839 CUTAO60888 179 aa17.24■□□□□ 0.35
TRAPPC9-205ENST00000518839 IKQ13123 557 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC9-205ENST00000518839 SYDE2Q5VT97 1194 aa17.24■□□□□ 0.35
TRAPPC9-205ENST00000518839 TYW1BQ6NUM6 668 aa17.24■□□□□ 0.35
TRAPPC9-205ENST00000518839 USP50Q70EL3 339 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC9-205ENST00000518839 FAM160B2Q86V87 743 aa17.24■□□□□ 0.35
TRAPPC9-205ENST00000518839 CCAR1Q8IX12 1150 aaKnown RBP17.24■□□□□ 0.35
TRAPPC9-205ENST00000518839 CHURC1Q8WUH1 139 aa17.24■□□□□ 0.35
TRAPPC9-205ENST00000518839 DCPSQ96C86 337 aaKnown RBP17.24■□□□□ 0.35
TRAPPC9-205ENST00000518839 AS3MTQ9HBK9 375 aa17.24■□□□□ 0.35
TRAPPC9-205ENST00000518839 USP17L10C9JJH3 530 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 SLC16A2P36021 539 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 ECE1P42892 770 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 ADCY7P51828 1080 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 STAT2P52630 851 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 CDC37Q16543 378 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 TTC38Q5R3I4 469 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 PIK3AP1Q6ZUJ8 805 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 TEX2Q8IWB9 1127 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 SCYL3Q8IZE3 742 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 ACER1Q8TDN7 264 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 ZC3H15Q8WU90 426 aaKnown RBP17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 LPAR1Q92633 364 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 FEZ1Q99689 392 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 PCDHA6Q9UN73 950 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 PCDHA8Q9Y5H6 950 aa17.23■□□□□ 0.35
TRAPPC9-205ENST00000518839 GOLGA6L3A6NEY3 463 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 TMEM232C9JQI7 657 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 LIG1P18858 919 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 CMA1P23946 247 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 MRPL12P52815 198 aaKnown RBP17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 FAM160A1Q05DH4 1040 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 TPRNQ4KMQ1 711 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 MCTP2Q6DN12 878 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 SULF1Q8IWU6 871 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 REXO1Q8N1G1 1221 aaKnown RBP17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 KRI1Q8N9T8 703 aaKnown RBP17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 FSIP1Q8NA03 581 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 KIAA1683Q9H0B3 1180 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 NUP62CLQ9H1M0 184 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 PICK1Q9NRD5 415 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 FEM1BQ9UK73 627 aa17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 SCAF8Q9UPN6 1271 aaKnown RBP17.22■□□□□ 0.35
TRAPPC9-205ENST00000518839 IQCA1LA6NCM1 817 aa17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 GLTPD2A6NH11 291 aa17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 CTAGE5O15320 804 aa17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 USP14P54578 494 aa17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 ORC2Q13416 577 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 NONOQ15233 471 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 QRICH1Q2TAL8 776 aa17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 NOL9Q5SY16 702 aaKnown RBP17.21■□□□□ 0.35
TRAPPC9-205ENST00000518839 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms