RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 HTR3BO95264 441 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 FXR1P51114 621 aaKnown RBP eCLIP6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 MAP2K1Q02750 393 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 GSTM4Q03013 218 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 POU4F3Q15319 338 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 BBS9Q3SYG4 887 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 GDF6Q6KF10 455 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 PSAPL1Q6NUJ1 521 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 TTC6Q86TZ1 520 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 FAM178BQ8IXR5 827 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 LRRC47Q8N1G4 583 aaKnown RBP6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 GOLGA6L1Q8N7Z2 621 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 KLHL23Q8NBE8 558 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 ELMO3Q96BJ8 720 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 CWC22Q9HCG8 908 aaKnown RBP6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 ADAM30Q9UKF2 790 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 ERBB4Q15303 1308 aa6.41□□□□□ -1.38
HMGB1P23-201ENST00000518743 CASP8AP2Q9UKL3 1982 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 H3BM21 787 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 AGRPO00253 132 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 SOX1O00570 391 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 PPFIA3O75145 1194 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 GJB6O95452 261 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 SLFN14P0C7P3 912 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 CCNFP41002 786 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 RASIP1Q5U651 963 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 ADAMTSL4Q6UY14 1074 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 VWA5B2Q8N398 1253 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 LILRB2Q8N423 598 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 STK35Q8TDR2 534 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 GPATCH3Q96I76 525 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 PCDH12Q9NPG4 1184 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 SH2B1Q9NRF2 756 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 MBIPQ9NS73 344 aa6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 POLR3KQ9Y2Y1 108 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P23-201ENST00000518743 SYNGAP1Q96PV0 1343 aa6.4□□□□□ -1.39
HMGB1P23-201ENST00000518743 PHRF1Q9P1Y6 1649 aaKnown RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 PIK3C2AO00443 1686 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 VIRMAQ69YN4 1812 aaKnown RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 A0A1W2PQH9 124 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 GFRA2O00451 464 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 EPHA1P21709 976 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 GMPRP36959 345 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 ZNF143P52747 638 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 SSRP1Q08945 709 aaKnown RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 WIPI1Q5MNZ9 446 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 TMEM201Q5SNT2 666 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 HGSNATQ68CP4 663 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 IL22RA1Q8N6P7 574 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 DHRS1Q96LJ7 313 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 TNKS2Q9H2K2 1166 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 TYW1Q9NV66 732 aaKnown RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 RNF181Q9P0P0 153 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 NAGPAQ9UK23 515 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 BRD4O60885 1362 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 CEP162Q5TB80 1403 aa6.39□□□□□ -1.39
HMGB1P23-201ENST00000518743 TRIOBPQ9H2D6 2365 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 ESYT3A0FGR9 886 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 GPR25O00155 361 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 RAB11FIP3O75154 756 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 VEGFAP15692 232 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 PLCG1P19174 1290 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 GYS2P54840 703 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 PDE3AQ14432 1141 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 TMEM67Q5HYA8 995 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 CDCP2Q5VXM1 449 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 NLRC3Q7RTR2 1065 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 MARCH10Q8NA82 808 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 GPBAR1Q8TDU6 330 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 SLC7A3Q8WY07 619 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 SGSM3Q96HU1 749 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 MDFIQ99750 246 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 GPRASP1Q5JY77 1395 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 NRXN1Q9ULB1 1477 aa6.38□□□□□ -1.39
HMGB1P23-201ENST00000518743 BTAF1O14981 1849 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 CRYBG1Q9Y4K1 1723 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 ALS2Q96Q42 1657 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 EEA1Q15075 1411 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 C2CD2LO14523 706 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 TNFRSF10CO14798 259 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 LILRB5O75023 590 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 NME1P15531 152 aaKnown RBP6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 YARSP54577 528 aaKnown RBP6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 SUZ12Q15022 739 aaKnown RBP6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 KIF4BQ2VIQ3 1234 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 CCDC181Q5TID7 509 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 VHLLQ6RSH7 139 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 C6orf15Q6UXA7 325 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 SLCO4C1Q6ZQN7 724 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 WFDC8Q8IUA0 241 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 NPAS3Q8IXF0 933 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 MICAL1Q8TDZ2 1067 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 IRF7Q92985 503 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 PLPPR2Q96GM1 343 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 IPO9Q96P70 1041 aaKnown RBP6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 JPH1Q9HDC5 661 aaPredicted RBP6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 LRRC4BQ9NT99 713 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 REV1Q9UBZ9 1251 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 ZMYM5Q9UJ78 669 aa6.37□□□□□ -1.39
HMGB1P23-201ENST00000518743 IFT172Q9UG01 1749 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms