RNA–Protein interactions for RNA: ENST00000518224.1

IGHV3-25-201, Transcript of immunoglobulin heavy variable 3-25 (pseudogene), humanhuman

BASIC

Gene IGHV3-25, Length 351 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-25-201ENST00000518224 HAND2P61296 217 aa13.39□□□□□ -0.27
IGHV3-25-201ENST00000518224 PRPF38BQ5VTL8 546 aaKnown RBP13.39□□□□□ -0.27
IGHV3-25-201ENST00000518224 LHX8Q68G74 356 aa13.39□□□□□ -0.27
IGHV3-25-201ENST00000518224 BTNL9Q6UXG8 535 aa13.39□□□□□ -0.27
IGHV3-25-201ENST00000518224 MFSD6Q6ZSS7 791 aa13.39□□□□□ -0.27
IGHV3-25-201ENST00000518224 CENPQQ7L2Z9 268 aaPredicted RBP13.39□□□□□ -0.27
IGHV3-25-201ENST00000518224 ANKLE1Q8NAG6 615 aa13.39□□□□□ -0.27
IGHV3-25-201ENST00000518224 ANKS1AQ92625 1134 aa13.39□□□□□ -0.27
IGHV3-25-201ENST00000518224 TEX13BQ9BXU2 312 aa13.39□□□□□ -0.27
IGHV3-25-201ENST00000518224 DIS3Q9Y2L1 958 aaKnown RBP13.39□□□□□ -0.27
IGHV3-25-201ENST00000518224 NEDD4P46934 1319 aa13.39□□□□□ -0.27
IGHV3-25-201ENST00000518224 DNAJC25-GNG10A0A024R161 153 aa13.38□□□□□ -0.27
IGHV3-25-201ENST00000518224 ZNF213O14771 459 aa13.38□□□□□ -0.27
IGHV3-25-201ENST00000518224 SNHG28P0DPA3 235 aa13.38□□□□□ -0.27
IGHV3-25-201ENST00000518224 TOP1P11387 765 aaKnown RBP13.38□□□□□ -0.27
IGHV3-25-201ENST00000518224 FAM160B2Q86V87 743 aa13.38□□□□□ -0.27
IGHV3-25-201ENST00000518224 CHURC1Q8WUH1 139 aa13.38□□□□□ -0.27
IGHV3-25-201ENST00000518224 CTNNA3Q9UI47 895 aa13.38□□□□□ -0.27
IGHV3-25-201ENST00000518224 STX8Q9UNK0 236 aa13.38□□□□□ -0.27
IGHV3-25-201ENST00000518224 RIPK3Q9Y572 518 aa13.38□□□□□ -0.27
IGHV3-25-201ENST00000518224 ZNF536O15090 1300 aa13.38□□□□□ -0.27
IGHV3-25-201ENST00000518224 SGSM2O43147 1006 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 FCER1AP12319 257 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 CYBAP13498 195 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 MCCP23508 829 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 SLC1A4P43007 532 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 STAT2P52630 851 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 PLS1Q14651 629 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 ZNF792Q3KQV3 632 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 WDR78Q5VTH9 848 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 MFSD14CQ5VZR4 134 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 NCAPG2Q86XI2 1143 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 DGKHQ86XP1 1220 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 DCAF4Q8WV16 495 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 RUFY2Q8WXA3 655 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 ESR2Q92731 530 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 TMEM47Q9BQJ4 181 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 NRBP1Q9UHY1 535 aa13.37□□□□□ -0.27
IGHV3-25-201ENST00000518224 TMEM232C9JQI7 657 aa13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 RAD21O60216 631 aa13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 ZBED4O75132 1171 aa13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 FARP2O94887 1054 aaPredicted RBP13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 CCND3P30281 292 aaPredicted RBP13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 IMMTQ16891 758 aaKnown RBP13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 SNRNP48Q6IEG0 339 aaKnown RBP13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 RASGRP2Q7LDG7 609 aa13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 DPP9Q86TI2 863 aa13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 TRPV1Q8NER1 839 aa13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 MAML3Q96JK9 1138 aa13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 CWC22Q9HCG8 908 aaKnown RBP13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 SLC5A4Q9NY91 659 aa13.36□□□□□ -0.27
IGHV3-25-201ENST00000518224 FRMPD3Q5JV73 1810 aa13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 PDHBP11177 359 aa13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 COL6A1P12109 1028 aa13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 PTH1RQ03431 593 aa13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 CCDC178Q5BJE1 867 aa13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 BMP2KLQ5H9B9 411 aa13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 RRP12Q5JTH9 1297 aaKnown RBP13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 MAMDC4Q6UXC1 1216 aa13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 ZNF467Q7Z7K2 595 aaPredicted RBP13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 MSL3Q8N5Y2 521 aaKnown RBP13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 CHST13Q8NET6 341 aa13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 MAP4K1Q92918 833 aa13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 KIFC2Q96AC6 838 aa13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 MMP19Q99542 508 aa13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 ZSWIM5Q9P217 1185 aa13.35□□□□□ -0.27
IGHV3-25-201ENST00000518224 PLXNA1Q9UIW2 1896 aa13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 MSCO60682 206 aa13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 TFRCP02786 760 aaKnown RBP13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 CYP2C19P33261 490 aa13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 KCTD2Q14681 263 aa13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 TKFCQ3LXA3 575 aa13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 KCTD1Q719H9 257 aa13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 FGD4Q96M96 766 aa13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 KRT23Q9C075 422 aa13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 RANBP17Q9H2T7 1088 aaKnown RBP13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 CNNM2Q9H8M5 875 aa13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 RAVER2Q9HCJ3 691 aaKnown RBP13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 TOMM22Q9NS69 142 aa13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 FBXO40Q9UH90 709 aa13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 PRR12Q9ULL5 1215 aa13.34□□□□□ -0.27
IGHV3-25-201ENST00000518224 B4E1Z4 1266 aa13.33□□□□□ -0.28
IGHV3-25-201ENST00000518224 KDM4AO75164 1064 aa13.33□□□□□ -0.28
IGHV3-25-201ENST00000518224 CYP21A2P08686 494 aa13.33□□□□□ -0.28
IGHV3-25-201ENST00000518224 ZNF543Q08ER8 600 aa13.33□□□□□ -0.28
IGHV3-25-201ENST00000518224 SEC23AQ15436 765 aa13.33□□□□□ -0.28
IGHV3-25-201ENST00000518224 SAMD1Q6SPF0 538 aaPredicted RBP13.33□□□□□ -0.28
IGHV3-25-201ENST00000518224 IQCA1Q86XH1 822 aa13.33□□□□□ -0.28
IGHV3-25-201ENST00000518224 ENAHQ8N8S7 591 aaPredicted RBP13.33□□□□□ -0.28
IGHV3-25-201ENST00000518224 TINF2Q9BSI4 451 aa13.33□□□□□ -0.28
IGHV3-25-201ENST00000518224 DDX20Q9UHI6 824 aaKnown RBP13.33□□□□□ -0.28
IGHV3-25-201ENST00000518224 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
IGHV3-25-201ENST00000518224 SMCHD1A6NHR9 2005 aa13.32□□□□□ -0.28
IGHV3-25-201ENST00000518224 SEPT4O43236 478 aa13.32□□□□□ -0.28
IGHV3-25-201ENST00000518224 PGK2P07205 417 aa13.32□□□□□ -0.28
IGHV3-25-201ENST00000518224 TTBK2Q6IQ55 1244 aa13.32□□□□□ -0.28
IGHV3-25-201ENST00000518224 NECAB2Q7Z6G3 386 aa13.32□□□□□ -0.28
IGHV3-25-201ENST00000518224 CPXCR1Q8N123 301 aa13.32□□□□□ -0.28
IGHV3-25-201ENST00000518224 FAM133AQ8N9E0 248 aa13.32□□□□□ -0.28
IGHV3-25-201ENST00000518224 DIS3LQ8TF46 1054 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms