RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.8■■□□□ 1.88
SLIT3-204ENST00000518140 A0A1W2PRG0 241 aa26.79■■□□□ 1.88
SLIT3-204ENST00000518140 CALML3P27482 149 aa26.79■■□□□ 1.88
SLIT3-204ENST00000518140 GRIN1Q05586 938 aa26.79■■□□□ 1.88
SLIT3-204ENST00000518140 SHC4Q6S5L8 630 aa26.79■■□□□ 1.88
SLIT3-204ENST00000518140 FMR1NBQ8N0W7 255 aaPredicted RBP26.79■■□□□ 1.88
SLIT3-204ENST00000518140 M0R2N6 131 aa26.78■■□□□ 1.88
SLIT3-204ENST00000518140 PPP4R3BQ5MIZ7 849 aa26.78■■□□□ 1.88
SLIT3-204ENST00000518140 SLFN13Q68D06 897 aa26.78■■□□□ 1.88
SLIT3-204ENST00000518140 RNF214Q8ND24 703 aa26.78■■□□□ 1.88
SLIT3-204ENST00000518140 MAP3K11Q16584 847 aa26.78■■□□□ 1.88
SLIT3-204ENST00000518140 SEC63Q9UGP8 760 aaKnown RBP26.78■■□□□ 1.88
SLIT3-204ENST00000518140 ESPNB1AK53 854 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 F5H6K3 240 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 CMA1P23946 247 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 KLRC3Q07444 240 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 ZNF174Q15697 407 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 TRIM44Q96DX7 344 aaPredicted RBP26.77■■□□□ 1.88
SLIT3-204ENST00000518140 TRIM75PA6NK02 468 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 USP17L10C9JJH3 530 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 NAPAP54920 295 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 GPATCH4Q5T3I0 446 aaKnown RBP26.77■■□□□ 1.88
SLIT3-204ENST00000518140 JMYQ8N9B5 988 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 COA7Q96BR5 231 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 TEPSINQ96N21 525 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 NUP88Q99567 741 aaPredicted RBP26.77■■□□□ 1.88
SLIT3-204ENST00000518140 PCDHA6Q9UN73 950 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 PCDHA8Q9Y5H6 950 aa26.77■■□□□ 1.88
SLIT3-204ENST00000518140 TBC1D12O60347 775 aa26.76■■□□□ 1.87
SLIT3-204ENST00000518140 SLC1A4P43007 532 aa26.76■■□□□ 1.87
SLIT3-204ENST00000518140 SPECC1Q5M775 1068 aa26.76■■□□□ 1.87
SLIT3-204ENST00000518140 SYT17Q9BSW7 474 aa26.76■■□□□ 1.87
SLIT3-204ENST00000518140 FBXO2Q9UK22 296 aaPredicted RBP26.76■■□□□ 1.87
SLIT3-204ENST00000518140 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.75■■□□□ 1.87
SLIT3-204ENST00000518140 PPP1R11O60927 126 aaPredicted RBP26.75■■□□□ 1.87
SLIT3-204ENST00000518140 PFKFB1P16118 471 aa26.75■■□□□ 1.87
SLIT3-204ENST00000518140 ECE1P42892 770 aa26.75■■□□□ 1.87
SLIT3-204ENST00000518140 RBM43Q6ZSC3 357 aaKnown RBP26.75■■□□□ 1.87
SLIT3-204ENST00000518140 CCDC148Q8NFR7 591 aa26.75■■□□□ 1.87
SLIT3-204ENST00000518140 ACER1Q8TDN7 264 aa26.75■■□□□ 1.87
SLIT3-204ENST00000518140 ZMYND12Q9H0C1 365 aa26.75■■□□□ 1.87
SLIT3-204ENST00000518140 SMCO2A6NFE2 343 aa26.75■■□□□ 1.87
SLIT3-204ENST00000518140 NDUFB10O96000 172 aa26.75■■□□□ 1.87
SLIT3-204ENST00000518140 LMNB1P20700 586 aa26.75■■□□□ 1.87
SLIT3-204ENST00000518140 MMP14P50281 582 aa26.75■■□□□ 1.87
SLIT3-204ENST00000518140 KRI1Q8N9T8 703 aaKnown RBP26.75■■□□□ 1.87
SLIT3-204ENST00000518140 HACL1Q9UJ83 578 aa26.75■■□□□ 1.87
SLIT3-204ENST00000518140 ZBTB21Q9ULJ3 1066 aa26.75■■□□□ 1.87
SLIT3-204ENST00000518140 CUTAO60888 179 aa26.74■■□□□ 1.87
SLIT3-204ENST00000518140 MAP3K10Q02779 954 aa26.74■■□□□ 1.87
SLIT3-204ENST00000518140 TTC38Q5R3I4 469 aa26.74■■□□□ 1.87
SLIT3-204ENST00000518140 DAGLBQ8NCG7 672 aa26.74■■□□□ 1.87
SLIT3-204ENST00000518140 KINO60870 393 aaKnown RBP26.74■■□□□ 1.87
SLIT3-204ENST00000518140 PTPREP23469 700 aa26.74■■□□□ 1.87
SLIT3-204ENST00000518140 CCDC173Q0VFZ6 552 aa26.74■■□□□ 1.87
SLIT3-204ENST00000518140 KIF4BQ2VIQ3 1234 aa26.74■■□□□ 1.87
SLIT3-204ENST00000518140 DCAF4Q8WV16 495 aa26.74■■□□□ 1.87
SLIT3-204ENST00000518140 NOL7Q9UMY1 257 aaKnown RBP26.74■■□□□ 1.87
SLIT3-204ENST00000518140 TNNI2P48788 182 aa26.73■■□□□ 1.87
SLIT3-204ENST00000518140 KIAA1755Q5JYT7 1200 aa26.73■■□□□ 1.87
SLIT3-204ENST00000518140 RESP18Q5W5W9 173 aa26.73■■□□□ 1.87
SLIT3-204ENST00000518140 SPICE1Q8N0Z3 855 aa26.72■■□□□ 1.87
SLIT3-204ENST00000518140 GMCL1P1Q8NEA9 526 aa26.72■■□□□ 1.87
SLIT3-204ENST00000518140 ERCC4Q92889 916 aaPredicted RBP26.72■■□□□ 1.87
SLIT3-204ENST00000518140 PPP1R9BQ96SB3 815 aa26.72■■□□□ 1.87
SLIT3-204ENST00000518140 PNMA6FA0A0J9YX94 578 aa26.72■■□□□ 1.87
SLIT3-204ENST00000518140 ZNF202O95125 648 aa26.72■■□□□ 1.87
SLIT3-204ENST00000518140 CAP2P40123 477 aa26.72■■□□□ 1.87
SLIT3-204ENST00000518140 GALNT17Q6IS24 598 aa26.72■■□□□ 1.87
SLIT3-204ENST00000518140 CCDC84Q86UT8 332 aaPredicted RBP26.72■■□□□ 1.87
SLIT3-204ENST00000518140 TRPM4Q8TD43 1214 aa26.72■■□□□ 1.87
SLIT3-204ENST00000518140 MTMR8Q96EF0 704 aa26.72■■□□□ 1.87
SLIT3-204ENST00000518140 HPSEQ9Y251 543 aa26.72■■□□□ 1.87
SLIT3-204ENST00000518140 CEP131Q9UPN4 1083 aa26.71■■□□□ 1.87
SLIT3-204ENST00000518140 SRPRBQ9Y5M8 271 aaKnown RBP26.71■■□□□ 1.87
SLIT3-204ENST00000518140 PHF20L1A8MW92 1017 aa26.7■■□□□ 1.87
SLIT3-204ENST00000518140 YBX3P16989 372 aaKnown RBP eCLIP26.7■■□□□ 1.87
SLIT3-204ENST00000518140 DEFB129Q9H1M3 183 aa26.7■■□□□ 1.87
SLIT3-204ENST00000518140 H7C1D1 291 aa26.7■■□□□ 1.86
SLIT3-204ENST00000518140 MCM7P33993 719 aa26.7■■□□□ 1.86
SLIT3-204ENST00000518140 SNAP25P60880 206 aa26.7■■□□□ 1.86
SLIT3-204ENST00000518140 PTGDRQ13258 359 aa26.7■■□□□ 1.86
SLIT3-204ENST00000518140 ILDR2Q71H61 639 aa26.7■■□□□ 1.86
SLIT3-204ENST00000518140 GMCL1Q96IK5 515 aa26.7■■□□□ 1.86
SLIT3-204ENST00000518140 C6orf50Q9HD87 102 aa26.7■■□□□ 1.86
SLIT3-204ENST00000518140 CCDC194A0A1B0GVG4 234 aa26.69■■□□□ 1.86
SLIT3-204ENST00000518140 EPS15P42566 896 aa26.69■■□□□ 1.86
SLIT3-204ENST00000518140 TYRO3Q06418 890 aa26.69■■□□□ 1.86
SLIT3-204ENST00000518140 INF2Q27J81 1249 aa26.69■■□□□ 1.86
SLIT3-204ENST00000518140 USP49Q70CQ1 688 aa26.69■■□□□ 1.86
SLIT3-204ENST00000518140 CCDC12Q8WUD4 166 aaPredicted RBP26.69■■□□□ 1.86
SLIT3-204ENST00000518140 GLIS2Q9BZE0 524 aaPredicted RBP26.69■■□□□ 1.86
SLIT3-204ENST00000518140 GPRC5DQ9NZD1 345 aa26.69■■□□□ 1.86
SLIT3-204ENST00000518140 FAM237AA0A1B0GTK4 181 aa26.69■■□□□ 1.86
SLIT3-204ENST00000518140 ZBTB5O15062 677 aa26.69■■□□□ 1.86
SLIT3-204ENST00000518140 TRAPPC10P48553 1259 aa26.69■■□□□ 1.86
SLIT3-204ENST00000518140 TNFAIP1Q13829 316 aa26.69■■□□□ 1.86
SLIT3-204ENST00000518140 CSRNP2Q9H175 543 aa26.69■■□□□ 1.86
SLIT3-204ENST00000518140 TMEM260Q9NX78 707 aa26.69■■□□□ 1.86
SLIT3-204ENST00000518140 BIN2Q9UBW5 565 aaPredicted RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms