RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 LCORLQ8N3X6 602 aa13.82□□□□□ -0.2
TRAPPC9-203ENST00000517667 UHRF1Q96T88 793 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-203ENST00000517667 TSPYL2Q9H2G4 693 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC9-203ENST00000517667 PRDM12Q9H4Q4 367 aa13.82□□□□□ -0.2
TRAPPC9-203ENST00000517667 C1orf115Q9H7X2 142 aa13.82□□□□□ -0.2
TRAPPC9-203ENST00000517667 KANSL2Q9H9L4 492 aa13.82□□□□□ -0.2
TRAPPC9-203ENST00000517667 A0A0U1RQG5 324 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 TLR3O15455 904 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 C6orf222P0C671 652 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 CYP2D6P10635 497 aa13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 EEF2P13639 858 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 CSF2RAP15509 400 aa13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 PBX2P40425 430 aa13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 CDK7P50613 346 aa13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 C16orf59Q7L2K0 433 aa13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 ZNF467Q7Z7K2 595 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 FTSJ3Q8IY81 847 aaKnown RBP13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 DYNLL2Q96FJ2 89 aa13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 DDRGK1Q96HY6 314 aa13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 TEX13BQ9BXU2 312 aa13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 FBXO28Q9NVF7 368 aa13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 ZHX1Q9UKY1 873 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC9-203ENST00000517667 MYH7P12883 1935 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 GREB1LQ9C091 1923 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 XIRP2A4UGR9 3374 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 TCRBV5S4A2TA0A5A2 114 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 APBB1O00213 710 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 ASGR1P07306 291 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 CDK8P49336 464 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 HSP90AB4PQ58FF6 505 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 ZNF365Q70YC5 407 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 REPS2Q8NFH8 660 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 VTI1AQ96AJ9 217 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 FAM122AQ96E09 287 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 DDX11Q96FC9 970 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 SLC28A3Q9HAS3 691 aa13.8□□□□□ -0.2
TRAPPC9-203ENST00000517667 GRXCR1A8MXD5 290 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 ARVCFO00192 962 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 GOLIM4O00461 696 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 RAD21O60216 631 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 SNAI1O95863 264 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 IGFBP4P22692 258 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 FAM83BQ5T0W9 1011 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 C12orf60Q5U649 245 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 SNRNP48Q6IEG0 339 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 C16orf86Q6ZW13 317 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 ITPRIPQ8IWB1 547 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 FAM126BQ8IXS8 530 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 HERVK_113Q902F9 699 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 DNAJC2Q99543 621 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 SLF1Q9BQI6 1058 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 C1QTNF1Q9BXJ1 281 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 UPF3AQ9H1J1 476 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 ABHD16BQ9H3Z7 469 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 ARMT1Q9H993 441 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 IL23AQ9NPF7 189 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 EXOC6BQ9Y2D4 811 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 MCM3APO60318 1980 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 MYO9BQ13459 2157 aa13.79□□□□□ -0.2
TRAPPC9-203ENST00000517667 TRANK1O15050 2925 aa13.78□□□□□ -0.2
TRAPPC9-203ENST00000517667 DNAJC25-GNG10A0A024R161 153 aa13.78□□□□□ -0.2
TRAPPC9-203ENST00000517667 MYADML2A6NDP7 307 aa13.78□□□□□ -0.2
TRAPPC9-203ENST00000517667 ATP2A1O14983 1001 aa13.78□□□□□ -0.2
TRAPPC9-203ENST00000517667 GJA9P57773 515 aa13.78□□□□□ -0.2
TRAPPC9-203ENST00000517667 ACVR2BQ13705 512 aa13.78□□□□□ -0.2
TRAPPC9-203ENST00000517667 ADGRE1Q14246 886 aa13.78□□□□□ -0.2
TRAPPC9-203ENST00000517667 CCDC85BQ15834 202 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-203ENST00000517667 CEP85Q6P2H3 762 aa13.78□□□□□ -0.2
TRAPPC9-203ENST00000517667 PPP1R12CQ9BZL4 782 aa13.78□□□□□ -0.2
TRAPPC9-203ENST00000517667 CXXC1Q9P0U4 656 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-203ENST00000517667 RAPGEFL1Q9UHV5 662 aa13.78□□□□□ -0.2
TRAPPC9-203ENST00000517667 CHD7Q9P2D1 2997 aa13.77□□□□□ -0.2
TRAPPC9-203ENST00000517667 MBD4O95243 580 aa13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 ACRP10323 421 aa13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 AAK1Q2M2I8 961 aa13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 CCDC144BQ3MJ40 725 aa13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 GNASQ5JWF2 1037 aa13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 CLASRPQ8N2M8 674 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 PRPF38AQ8NAV1 312 aaKnown RBP13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 SEZ6LQ9BYH1 1024 aa13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 FBXO40Q9UH90 709 aa13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 CTDP1Q9Y5B0 961 aaPredicted RBP13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 MYH4Q9Y623 1939 aa13.77□□□□□ -0.21
TRAPPC9-203ENST00000517667 USP17L12C9JPN9 530 aa13.76□□□□□ -0.21
TRAPPC9-203ENST00000517667 USP17L21D6R901 530 aa13.76□□□□□ -0.21
TRAPPC9-203ENST00000517667 PRKAB2O43741 272 aa13.76□□□□□ -0.21
TRAPPC9-203ENST00000517667 CD4P01730 458 aa13.76□□□□□ -0.21
TRAPPC9-203ENST00000517667 FGBP02675 491 aa13.76□□□□□ -0.21
TRAPPC9-203ENST00000517667 ANKRD35Q8N283 1001 aa13.76□□□□□ -0.21
TRAPPC9-203ENST00000517667 RHPN1Q8TCX5 695 aa13.76□□□□□ -0.21
TRAPPC9-203ENST00000517667 IL1RAPL2Q9NP60 686 aa13.76□□□□□ -0.21
TRAPPC9-203ENST00000517667 PAG1Q9NWQ8 432 aa13.76□□□□□ -0.21
TRAPPC9-203ENST00000517667 REV3LO60673 3130 aa13.76□□□□□ -0.21
TRAPPC9-203ENST00000517667 ZBED9Q6R2W3 1325 aa13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 CYP2D7A0A087X1C5 515 aa13.75□□□□□ -0.21
TRAPPC9-203ENST00000517667 ADCY6O43306 1168 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms