RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 FCER1AP12319 257 aa29.08■■■□□ 2.25
PVT1-204ENST00000517525 MFSD14CQ5VZR4 134 aa29.08■■■□□ 2.25
PVT1-204ENST00000517525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.08■■■□□ 2.25
PVT1-204ENST00000517525 FAM160B2Q86V87 743 aa29.08■■■□□ 2.25
PVT1-204ENST00000517525 NPLOC4Q8TAT6 608 aa29.08■■■□□ 2.25
PVT1-204ENST00000517525 CHURC1Q8WUH1 139 aa29.08■■■□□ 2.25
PVT1-204ENST00000517525 IL25Q9H293 177 aa29.08■■■□□ 2.25
PVT1-204ENST00000517525 TOMM22Q9NS69 142 aa29.08■■■□□ 2.25
PVT1-204ENST00000517525 ZBED4O75132 1171 aa29.07■■■□□ 2.24
PVT1-204ENST00000517525 TOP1P11387 765 aaKnown RBP29.07■■■□□ 2.24
PVT1-204ENST00000517525 SLC1A4P43007 532 aa29.07■■■□□ 2.24
PVT1-204ENST00000517525 RRP12Q5JTH9 1297 aaKnown RBP29.07■■■□□ 2.24
PVT1-204ENST00000517525 RCSD1Q6JBY9 416 aa29.07■■■□□ 2.24
PVT1-204ENST00000517525 SAMD1Q6SPF0 538 aaPredicted RBP29.07■■■□□ 2.24
PVT1-204ENST00000517525 DPP9Q86TI2 863 aa29.07■■■□□ 2.24
PVT1-204ENST00000517525 ANKLE1Q8NAG6 615 aa29.07■■■□□ 2.24
PVT1-204ENST00000517525 ESR2Q92731 530 aa29.07■■■□□ 2.24
PVT1-204ENST00000517525 FLRT1Q9NZU1 646 aa29.07■■■□□ 2.24
PVT1-204ENST00000517525 COBLO75128 1261 aa29.06■■■□□ 2.24
PVT1-204ENST00000517525 PRPF38BQ5VTL8 546 aaKnown RBP29.06■■■□□ 2.24
PVT1-204ENST00000517525 TMEM232C9JQI7 657 aa29.05■■■□□ 2.24
PVT1-204ENST00000517525 TFRCP02786 760 aaKnown RBP29.05■■■□□ 2.24
PVT1-204ENST00000517525 MCCP23508 829 aa29.05■■■□□ 2.24
PVT1-204ENST00000517525 STAT2P52630 851 aa29.05■■■□□ 2.24
PVT1-204ENST00000517525 IMMTQ16891 758 aaKnown RBP29.05■■■□□ 2.24
PVT1-204ENST00000517525 DCAF4Q8WV16 495 aa29.05■■■□□ 2.24
PVT1-204ENST00000517525 KIFC2Q96AC6 838 aa29.05■■■□□ 2.24
PVT1-204ENST00000517525 TMEM47Q9BQJ4 181 aa29.05■■■□□ 2.24
PVT1-204ENST00000517525 OGDHLQ9ULD0 1010 aa29.05■■■□□ 2.24
PVT1-204ENST00000517525 DIS3Q9Y2L1 958 aaKnown RBP29.05■■■□□ 2.24
PVT1-204ENST00000517525 CCDC178Q5BJE1 867 aa29.04■■■□□ 2.24
PVT1-204ENST00000517525 NEDD4P46934 1319 aa29.03■■■□□ 2.24
PVT1-204ENST00000517525 FARP2O94887 1054 aaPredicted RBP29.03■■■□□ 2.24
PVT1-204ENST00000517525 SNRNP48Q6IEG0 339 aaKnown RBP29.03■■■□□ 2.24
PVT1-204ENST00000517525 DGKHQ86XP1 1220 aa29.03■■■□□ 2.24
PVT1-204ENST00000517525 ANKS1AQ92625 1134 aa29.03■■■□□ 2.24
PVT1-204ENST00000517525 MMP19Q99542 508 aa29.03■■■□□ 2.24
PVT1-204ENST00000517525 COL11A1P12107 1806 aaPredicted RBP29.02■■■□□ 2.24
PVT1-204ENST00000517525 SGSM2O43147 1006 aa29.02■■■□□ 2.24
PVT1-204ENST00000517525 KCTD2Q14681 263 aa29.02■■■□□ 2.24
PVT1-204ENST00000517525 BTNL9Q6UXG8 535 aa29.02■■■□□ 2.24
PVT1-204ENST00000517525 LHX8Q68G74 356 aa29.01■■■□□ 2.23
PVT1-204ENST00000517525 RIPK3Q9Y572 518 aa29.01■■■□□ 2.23
PVT1-204ENST00000517525 CTDP1Q9Y5B0 961 aaPredicted RBP29.01■■■□□ 2.23
PVT1-204ENST00000517525 LAMA4Q16363 1823 aa29.01■■■□□ 2.23
PVT1-204ENST00000517525 SNHG28P0DPA3 235 aa29■■■□□ 2.23
PVT1-204ENST00000517525 CCND3P30281 292 aaPredicted RBP29■■■□□ 2.23
PVT1-204ENST00000517525 ZNF792Q3KQV3 632 aa29■■■□□ 2.23
PVT1-204ENST00000517525 CHST13Q8NET6 341 aa29■■■□□ 2.23
PVT1-204ENST00000517525 MAML3Q96JK9 1138 aa29■■■□□ 2.23
PVT1-204ENST00000517525 KRT23Q9C075 422 aa29■■■□□ 2.23
PVT1-204ENST00000517525 CNNM2Q9H8M5 875 aa29■■■□□ 2.23
PVT1-204ENST00000517525 FBXO40Q9UH90 709 aa29■■■□□ 2.23
PVT1-204ENST00000517525 NRBP1Q9UHY1 535 aa29■■■□□ 2.23
PVT1-204ENST00000517525 MKI67P46013 3256 aaKnown RBP29■■■□□ 2.23
PVT1-204ENST00000517525 KCTD1Q719H9 257 aa28.99■■■□□ 2.23
PVT1-204ENST00000517525 IQCA1Q86XH1 822 aa28.99■■■□□ 2.23
PVT1-204ENST00000517525 RAVER2Q9HCJ3 691 aaKnown RBP28.99■■■□□ 2.23
PVT1-204ENST00000517525 DNAJC25-GNG10A0A024R161 153 aa28.98■■■□□ 2.23
PVT1-204ENST00000517525 MSCO60682 206 aa28.98■■■□□ 2.23
PVT1-204ENST00000517525 KDM4AO75164 1064 aa28.98■■■□□ 2.23
PVT1-204ENST00000517525 CYBAP13498 195 aa28.98■■■□□ 2.23
PVT1-204ENST00000517525 CYP2C19P33261 490 aa28.98■■■□□ 2.23
PVT1-204ENST00000517525 MNX1P50219 401 aaPredicted RBP28.98■■■□□ 2.23
PVT1-204ENST00000517525 CPXCR1Q8N123 301 aa28.98■■■□□ 2.23
PVT1-204ENST00000517525 HTATIP2Q9BUP3 242 aa28.98■■■□□ 2.23
PVT1-204ENST00000517525 ZNF536O15090 1300 aa28.97■■■□□ 2.23
PVT1-204ENST00000517525 TKFCQ3LXA3 575 aa28.97■■■□□ 2.23
PVT1-204ENST00000517525 MSL3Q8N5Y2 521 aaKnown RBP28.97■■■□□ 2.23
PVT1-204ENST00000517525 ZSWIM5Q9P217 1185 aa28.97■■■□□ 2.23
PVT1-204ENST00000517525 PRR12Q9ULL5 1215 aa28.97■■■□□ 2.23
PVT1-204ENST00000517525 U3KPZ7 1027 aaPredicted RBP28.97■■■□□ 2.23
PVT1-204ENST00000517525 PDHBP11177 359 aa28.96■■■□□ 2.23
PVT1-204ENST00000517525 PTH1RQ03431 593 aa28.96■■■□□ 2.23
PVT1-204ENST00000517525 BMP2KLQ5H9B9 411 aa28.96■■■□□ 2.23
PVT1-204ENST00000517525 TRPV1Q8NER1 839 aa28.96■■■□□ 2.23
PVT1-204ENST00000517525 B4E1Z4 1266 aa28.95■■■□□ 2.22
PVT1-204ENST00000517525 IKQ13123 557 aaPredicted RBP28.95■■■□□ 2.22
PVT1-204ENST00000517525 NECAB2Q7Z6G3 386 aa28.95■■■□□ 2.22
PVT1-204ENST00000517525 MAP4K1Q92918 833 aa28.95■■■□□ 2.22
PVT1-204ENST00000517525 ZSCAN10Q96SZ4 725 aaPredicted RBP28.95■■■□□ 2.22
PVT1-204ENST00000517525 DDX20Q9UHI6 824 aaKnown RBP28.95■■■□□ 2.22
PVT1-204ENST00000517525 PGK2P07205 417 aa28.94■■■□□ 2.22
PVT1-204ENST00000517525 ZNF543Q08ER8 600 aa28.94■■■□□ 2.22
PVT1-204ENST00000517525 CCDC96Q2M329 555 aa28.94■■■□□ 2.22
PVT1-204ENST00000517525 RASGRP2Q7LDG7 609 aa28.94■■■□□ 2.22
PVT1-204ENST00000517525 ZNF467Q7Z7K2 595 aaPredicted RBP28.94■■■□□ 2.22
PVT1-204ENST00000517525 PAWRQ96IZ0 340 aaKnown RBP28.94■■■□□ 2.22
PVT1-204ENST00000517525 TINF2Q9BSI4 451 aa28.94■■■□□ 2.22
PVT1-204ENST00000517525 RANBP17Q9H2T7 1088 aaKnown RBP28.94■■■□□ 2.22
PVT1-204ENST00000517525 ISY1Q9ULR0 285 aaKnown RBP28.94■■■□□ 2.22
PVT1-204ENST00000517525 CYP21A2P08686 494 aa28.93■■■□□ 2.22
PVT1-204ENST00000517525 MAMDC4Q6UXC1 1216 aa28.93■■■□□ 2.22
PVT1-204ENST00000517525 ZNFX1Q9P2E3 1918 aaKnown RBP28.92■■■□□ 2.22
PVT1-204ENST00000517525 SEPT4O43236 478 aa28.92■■■□□ 2.22
PVT1-204ENST00000517525 GPATCH4Q5T3I0 446 aaKnown RBP28.92■■■□□ 2.22
PVT1-204ENST00000517525 SYDE2Q5VT97 1194 aa28.92■■■□□ 2.22
PVT1-204ENST00000517525 TTBK2Q6IQ55 1244 aa28.92■■■□□ 2.22
PVT1-204ENST00000517525 ENAHQ8N8S7 591 aaPredicted RBP28.92■■■□□ 2.22
PVT1-204ENST00000517525 DDX11Q96FC9 970 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms