RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 MOV10L1Q9BXT6 1211 aaKnown RBP17.09■□□□□ 0.33
SCARNA21-201ENST00000517026 SPATC1LQ9H0A9 340 aa17.09■□□□□ 0.33
SCARNA21-201ENST00000517026 GABRQQ9UN88 632 aa17.09■□□□□ 0.33
SCARNA21-201ENST00000517026 ERICH2A1L162 156 aa17.08■□□□□ 0.32
SCARNA21-201ENST00000517026 SH2B2O14492 632 aaPredicted RBP17.08■□□□□ 0.32
SCARNA21-201ENST00000517026 STAT2P52630 851 aa17.08■□□□□ 0.32
SCARNA21-201ENST00000517026 PRKCZQ05513 592 aa17.08■□□□□ 0.32
SCARNA21-201ENST00000517026 KRT32Q14532 448 aa17.08■□□□□ 0.32
SCARNA21-201ENST00000517026 FAM160B2Q86V87 743 aa17.08■□□□□ 0.32
SCARNA21-201ENST00000517026 CCAR1Q8IX12 1150 aaKnown RBP17.08■□□□□ 0.32
SCARNA21-201ENST00000517026 JAKMIP1Q96N16 626 aaKnown RBP17.08■□□□□ 0.32
SCARNA21-201ENST00000517026 CPVLQ9H3G5 476 aa17.08■□□□□ 0.32
SCARNA21-201ENST00000517026 LY9Q9HBG7 655 aa17.08■□□□□ 0.32
SCARNA21-201ENST00000517026 SRRDQ9UH36 339 aa17.08■□□□□ 0.32
SCARNA21-201ENST00000517026 PTPN22Q9Y2R2 807 aa17.08■□□□□ 0.32
SCARNA21-201ENST00000517026 EPB41L2O43491 1005 aaKnown RBP17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 PLA2G6O60733 806 aa17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 ZBED4O75132 1171 aa17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 MAPK4P31152 587 aa17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 STAT3P40763 770 aa17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 CCNA1P78396 465 aa17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 EXOSC10Q01780 885 aaKnown RBP17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 C8orf34Q49A92 452 aa17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 WDR78Q5VTH9 848 aa17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 DHX32Q7L7V1 743 aaKnown RBP17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 CPXCR1Q8N123 301 aa17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 UBA5Q9GZZ9 404 aa17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 SLC38A10Q9HBR0 1119 aa17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 RAVER2Q9HCJ3 691 aaKnown RBP17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 ZNF214Q9UL59 606 aaPredicted RBP17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 PRR12Q9ULL5 1215 aa17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 PTCH2Q9Y6C5 1203 aa17.07■□□□□ 0.32
SCARNA21-201ENST00000517026 GNRH1P01148 92 aa17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 ERCC3P19447 782 aa17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 HOXD10P28358 340 aa17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 SLC4A3P48751 1232 aa17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 SYDE2Q5VT97 1194 aa17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 FBXO46Q6PJ61 603 aaPredicted RBP17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 BTNL9Q6UXG8 535 aa17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 GPR142Q7Z601 462 aa17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 PLEKHH3Q7Z736 793 aa17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 COA7Q96BR5 231 aa17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 TMEM87BQ96K49 555 aa17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 GJD2Q9UKL4 321 aa17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 CTDP1Q9Y5B0 961 aaPredicted RBP17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 MYH4Q9Y623 1939 aa17.06■□□□□ 0.32
SCARNA21-201ENST00000517026 PARP1P09874 1014 aaKnown RBP17.05■□□□□ 0.32
SCARNA21-201ENST00000517026 FLT3LGP49771 235 aa17.05■□□□□ 0.32
SCARNA21-201ENST00000517026 CCDC174Q6PII3 467 aa17.05■□□□□ 0.32
SCARNA21-201ENST00000517026 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
SCARNA21-201ENST00000517026 NCAPG2Q86XI2 1143 aa17.05■□□□□ 0.32
SCARNA21-201ENST00000517026 STAG2Q8N3U4 1231 aa17.05■□□□□ 0.32
SCARNA21-201ENST00000517026 MTA3Q9BTC8 594 aa17.05■□□□□ 0.32
SCARNA21-201ENST00000517026 MYL10Q9BUA6 226 aa17.05■□□□□ 0.32
SCARNA21-201ENST00000517026 CWC22Q9HCG8 908 aaKnown RBP17.05■□□□□ 0.32
SCARNA21-201ENST00000517026 RLFQ13129 1914 aa17.05■□□□□ 0.32
SCARNA21-201ENST00000517026 ZSWIM8A7E2V4 1837 aa17.05■□□□□ 0.32
SCARNA21-201ENST00000517026 TAL1P17542 331 aaPredicted RBP17.04■□□□□ 0.32
SCARNA21-201ENST00000517026 TROAPQ12815 778 aa17.04■□□□□ 0.32
SCARNA21-201ENST00000517026 GPATCH4Q5T3I0 446 aaKnown RBP17.04■□□□□ 0.32
SCARNA21-201ENST00000517026 SNRNP48Q6IEG0 339 aaKnown RBP17.04■□□□□ 0.32
SCARNA21-201ENST00000517026 CATIPQ7Z7H3 387 aa17.04■□□□□ 0.32
SCARNA21-201ENST00000517026 RAB11FIP4Q86YS3 637 aa17.04■□□□□ 0.32
SCARNA21-201ENST00000517026 RIOX2Q8IUF8 465 aa17.04■□□□□ 0.32
SCARNA21-201ENST00000517026 SHCBP1Q8NEM2 672 aa17.04■□□□□ 0.32
SCARNA21-201ENST00000517026 NUP133Q8WUM0 1156 aa17.04■□□□□ 0.32
SCARNA21-201ENST00000517026 AGBL1Q96MI9 1066 aa17.04■□□□□ 0.32
SCARNA21-201ENST00000517026 TEX13BQ9BXU2 312 aa17.04■□□□□ 0.32
SCARNA21-201ENST00000517026 RIPK3Q9Y572 518 aa17.04■□□□□ 0.32
SCARNA21-201ENST00000517026 ZNF536O15090 1300 aa17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 PALM3A6NDB9 673 aaPredicted RBP17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 ATP2A1O14983 1001 aa17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 HMGB1P09429 215 aaKnown RBP17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 CASTP20810 708 aaKnown RBP17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 LIFRP42702 1097 aa17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 PRMT2P55345 433 aa17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 GRM4Q14833 912 aa17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 ASPRV1Q53RT3 343 aa17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 MORN1Q5T089 497 aa17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 BLOC1S2Q6QNY1 142 aa17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 ZNF654Q8IZM8 581 aa17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 TMTC2Q8N394 836 aa17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 RAET1EQ8TD07 263 aa17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 RANBP17Q9H2T7 1088 aaKnown RBP17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 MAD2L2Q9UI95 211 aa17.03■□□□□ 0.32
SCARNA21-201ENST00000517026 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 CCDC69A6NI79 296 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 SLC25A27O95847 323 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 FDX1P10109 184 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 RXRAP19793 462 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 CYP2B6P20813 491 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 RPS6KB1P23443 525 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 PTPREP23469 700 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 PSMA5P28066 241 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 SLC35G1Q2M3R5 365 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 NUDT12Q9BQG2 462 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 MROH8Q9H579 483 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 VAT1LQ9HCJ6 419 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 BRPF3Q9ULD4 1205 aa17.02■□□□□ 0.32
SCARNA21-201ENST00000517026 SLC15A5A6NIM6 579 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms