RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 SHISA3A0PJX4 238 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 PRPF40AO75400 957 aaKnown RBP3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 MSL3P1P0C860 447 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 SDHBP21912 280 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 RPL10P27635 214 aaKnown RBP3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 CNR2P34972 360 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 MAPKAPK2P49137 400 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 HTRA3P83110 453 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 NR1I3Q14994 352 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 RAB3GAP1Q15042 981 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 CLEC16AQ2KHT3 1053 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 TMCO4Q5TGY1 634 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 WAPLQ7Z5K2 1190 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 ZFPM1Q8IX07 1006 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 DAGLBQ8NCG7 672 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 LINC00116Q8NCU8 138 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 FNIP1Q8TF40 1166 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 ACSF2Q96CM8 615 aaPredicted RBP3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 C8orf49Q96NF6 230 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 SPATA25Q9BR10 227 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 PLCD4Q9BRC7 762 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 SUSD2Q9UGT4 822 aa3.05□□□□□ -1.92
RNU2-56P-201ENST00000516826 TMEM82A0PJX8 343 aa3.04□□□□□ -1.92
RNU2-56P-201ENST00000516826 FADS2P1A8MWK0 482 aa3.04□□□□□ -1.92
RNU2-56P-201ENST00000516826 LRRN2O75325 713 aa3.04□□□□□ -1.92
RNU2-56P-201ENST00000516826 FBXO24O75426 580 aa3.04□□□□□ -1.92
RNU2-56P-201ENST00000516826 PLATP00750 562 aa3.04□□□□□ -1.92
RNU2-56P-201ENST00000516826 CELA3AP09093 270 aa3.04□□□□□ -1.92
RNU2-56P-201ENST00000516826 FBLN1P23142 703 aa3.04□□□□□ -1.92
RNU2-56P-201ENST00000516826 LOXL4Q96JB6 756 aa3.04□□□□□ -1.92
RNU2-56P-201ENST00000516826 FRMD6Q96NE9 622 aa3.04□□□□□ -1.92
RNU2-56P-201ENST00000516826 TNFRSF12AQ9NP84 129 aa3.04□□□□□ -1.92
RNU2-56P-201ENST00000516826 ACSL6Q9UKU0 697 aa3.04□□□□□ -1.92
RNU2-56P-201ENST00000516826 TSC22D4Q9Y3Q8 395 aa3.04□□□□□ -1.92
RNU2-56P-201ENST00000516826 LDHBP07195 334 aaKnown RBP3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 ENDOUP21128 410 aaKnown RBP3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 GNA15P30679 374 aa3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 YARSP54577 528 aaKnown RBP3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 MFAP1P55081 439 aaKnown RBP3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 NCKAP1LP55160 1127 aa3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 PCBP3P57721 371 aaKnown RBP3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 GJA9P57773 515 aa3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 FOXO4P98177 505 aa3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 CYP4F8P98187 520 aa3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 ATP2B2Q01814 1243 aa3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 DLX2Q07687 328 aaPredicted RBP3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 EAPPQ56P03 285 aaPredicted RBP3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 ZC3H14Q6PJT7 736 aaKnown RBP3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 RPTNQ6XPR3 784 aa3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 CARFQ8N187 725 aa3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 ZNF655Q8N720 491 aaPredicted RBP3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 DDX1Q92499 740 aaKnown RBP3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 KREMEN1Q96MU8 473 aa3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 SETDB2Q96T68 719 aa3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 ASCC2Q9H1I8 757 aaPredicted RBP3.03□□□□□ -1.92
RNU2-56P-201ENST00000516826 A0A1B0GTL3 188 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 A0A1W2PQ45 241 aaPredicted RBP3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 A0A1W2PQY0 241 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 PLA2G1BP04054 148 aaKnown RBP3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 MAPK8P45983 427 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 LIMS1P48059 325 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 DAB2P98082 770 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 HSF5Q4G112 596 aaPredicted RBP3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 TBC1D10BQ4KMP7 808 aaPredicted RBP3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 TMEM201Q5SNT2 666 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 TTBK2Q6IQ55 1244 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 TMC4Q7Z404 712 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 SPRED1Q7Z699 444 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 ZNF575Q86XF7 245 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 SLFN12Q8IYM2 578 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 ADGRG2Q8IZP9 1017 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 CHST13Q8NET6 341 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 SH3RF3Q8TEJ3 882 aaPredicted RBP3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 ZNF526Q8TF50 670 aaPredicted RBP3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 EAF1Q96JC9 268 aaPredicted RBP3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 FCRL2Q96LA5 508 aaPredicted RBP3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 ZNF747Q9BV97 191 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 SSBP3Q9BWW4 388 aaPredicted RBP3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 HDAC8Q9BY41 377 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 OSBPL7Q9BZF2 842 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 RNF38Q9H0F5 515 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 C12orf49Q9H741 205 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 TCFL5Q9UL49 500 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 WWC3Q9ULE0 1092 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 SPG7Q9UQ90 795 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 TAF6LQ9Y6J9 622 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 PMF1-BGLAPU3KQ54 211 aa3.02□□□□□ -1.93
RNU2-56P-201ENST00000516826 SSU72P8A0A1W2PR75 194 aa3.01□□□□□ -1.93
RNU2-56P-201ENST00000516826 NUDT19A8MXV4 375 aa3.01□□□□□ -1.93
RNU2-56P-201ENST00000516826 PRKCAP17252 672 aa3.01□□□□□ -1.93
RNU2-56P-201ENST00000516826 RPL6Q02878 288 aaKnown RBP3.01□□□□□ -1.93
RNU2-56P-201ENST00000516826 NMIQ13287 307 aaPredicted RBP3.01□□□□□ -1.93
RNU2-56P-201ENST00000516826 TSNAXIP1Q2TAA8 658 aa3.01□□□□□ -1.93
RNU2-56P-201ENST00000516826 PLEKHN1Q494U1 663 aaPredicted RBP3.01□□□□□ -1.93
RNU2-56P-201ENST00000516826 SLCO6A1Q86UG4 719 aa3.01□□□□□ -1.93
RNU2-56P-201ENST00000516826 RGS22Q8NE09 1264 aa3.01□□□□□ -1.93
RNU2-56P-201ENST00000516826 TCTN2Q96GX1 697 aa3.01□□□□□ -1.93
RNU2-56P-201ENST00000516826 CDK5RAP1Q96SZ6 601 aaKnown RBP3.01□□□□□ -1.93
RNU2-56P-201ENST00000516826 FOXP3Q9BZS1 431 aa3.01□□□□□ -1.93
RNU2-56P-201ENST00000516826 FAM8A1Q9UBU6 413 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms