RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 TTBK2Q6IQ55 1244 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 NCAPG2Q86XI2 1143 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 ABRAQ8N0Z2 381 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 PNMA1Q8ND90 353 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 IGDCC4Q8TDY8 1250 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 SOCS4Q8WXH5 440 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 KAT14Q9H8E8 782 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 IVNS1ABPQ9Y6Y0 642 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 MYH4Q9Y623 1939 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 TNKSO95271 1327 aa13.09□□□□□ -0.31
SCARNA20-201ENST00000516768 HTTP42858 3142 aa13.08□□□□□ -0.31
SCARNA20-201ENST00000516768 MGAMO43451 1857 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 HOXC6P09630 235 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 ELNP15502 786 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 RGS19P49795 217 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 OAZ1P54368 228 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 ZNF543Q08ER8 600 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 IKQ13123 557 aaPredicted RBP13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 GRB14Q14449 540 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 RALYLQ86SE5 291 aaKnown RBP13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 CPXCR1Q8N123 301 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 MTA3Q9BTC8 594 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 TEX13BQ9BXU2 312 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 CWC22Q9HCG8 908 aaKnown RBP13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 RAVER2Q9HCJ3 691 aaKnown RBP13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 BIN2Q9UBW5 565 aaPredicted RBP13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 PRR12Q9ULL5 1215 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 RIPK3Q9Y572 518 aa13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
SCARNA20-201ENST00000516768 IFIT3O14879 490 aaKnown RBP13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 FCER1AP12319 257 aa13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 COPB2P35606 906 aa13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 SLC16A2P36021 539 aa13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 RGS2P41220 211 aa13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 UBXN2AP68543 259 aa13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 GPATCH4Q5T3I0 446 aaKnown RBP13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 IFIT1BQ5T764 474 aaKnown RBP13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 RASGRP2Q7LDG7 609 aa13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 CHST3Q7LGC8 479 aa13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 MB21D2Q8IYB1 491 aaPredicted RBP13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 TRMT44Q8IYL2 757 aaKnown RBP13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 TMEM106CQ9BVX2 250 aa13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 GPCPD1Q9NPB8 672 aa13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 ISY1Q9ULR0 285 aaKnown RBP13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 ZNF536O15090 1300 aa13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 CENPFP49454 3210 aa13.07□□□□□ -0.32
SCARNA20-201ENST00000516768 ERICH2A1L162 156 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 EPB41L2O43491 1005 aaKnown RBP13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 COBLO75128 1261 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 REC8O95072 547 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 ADORA2AP29274 412 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 MCM5P33992 734 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 ANTXR2P58335 489 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 SART3Q15020 963 aaKnown RBP13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 MTFR1Q15390 333 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 SNRNP48Q6IEG0 339 aaKnown RBP13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 DPP9Q86TI2 863 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 RASEFQ8IZ41 740 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 TMTC2Q8N394 836 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 NPLOC4Q8TAT6 608 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 TRIB2Q92519 343 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 KCNB2Q92953 911 aa13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 FRMPD2Q68DX3 1309 aaPredicted RBP13.06□□□□□ -0.32
SCARNA20-201ENST00000516768 MYCP01106 439 aaPredicted RBP13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 IGHA2P01877 340 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 HMGCRP04035 888 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 INHAP05111 366 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 GOLGA8HP0CJ92 632 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 CCL5P13501 91 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 COL9A3Q14050 684 aaPredicted RBP13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 WTAPQ15007 396 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 CCL14Q16627 93 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 SYDE2Q5VT97 1194 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 CHST13Q8NET6 341 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 AGBL1Q96MI9 1066 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 APBA2Q99767 749 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 UBA5Q9GZZ9 404 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 RANBP17Q9H2T7 1088 aaKnown RBP13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 SENP2Q9HC62 589 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 SLC5A4Q9NY91 659 aa13.05□□□□□ -0.32
SCARNA20-201ENST00000516768 LAMA4Q16363 1823 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 PRC1O43663 620 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 GJB1P08034 283 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 PARP1P09874 1014 aaKnown RBP13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 HSPA4P34932 840 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 SLC4A3P48751 1232 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 SOX10P56693 466 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 SNAP25P60880 206 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 EXOSC10Q01780 885 aaKnown RBP13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 KCTD2Q14681 263 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 TKFCQ3LXA3 575 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 ASPRV1Q53RT3 343 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 TMEM67Q5HYA8 995 aa13.04□□□□□ -0.32
SCARNA20-201ENST00000516768 MAP3K21Q5TCX8 1036 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms