RNA–Protein interactions for RNA: ENST00000515802.5

SH3BP2-229, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,247 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-229ENST00000515802 HLA-DOAP06340 250 aa17.17■□□□□ 0.34
SH3BP2-229ENST00000515802 SMARCA1P28370 1054 aa17.17■□□□□ 0.34
SH3BP2-229ENST00000515802 HDLBPQ00341 1268 aaKnown RBP17.17■□□□□ 0.34
SH3BP2-229ENST00000515802 PPP4R3BQ5MIZ7 849 aa17.17■□□□□ 0.34
SH3BP2-229ENST00000515802 GALNT17Q6IS24 598 aa17.17■□□□□ 0.34
SH3BP2-229ENST00000515802 CCDC186Q7Z3E2 898 aa17.17■□□□□ 0.34
SH3BP2-229ENST00000515802 C4orf32Q8N8J7 132 aa17.17■□□□□ 0.34
SH3BP2-229ENST00000515802 ZMYND12Q9H0C1 365 aa17.17■□□□□ 0.34
SH3BP2-229ENST00000515802 EHD4Q9H223 541 aa17.17■□□□□ 0.34
SH3BP2-229ENST00000515802 HSD3B7Q9H2F3 369 aa17.17■□□□□ 0.34
SH3BP2-229ENST00000515802 HOOK1Q9UJC3 728 aaKnown RBP17.17■□□□□ 0.34
SH3BP2-229ENST00000515802 FRMPD2Q68DX3 1309 aaPredicted RBP17.17■□□□□ 0.34
SH3BP2-229ENST00000515802 VGLL3A8MV65 326 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 SNHG28P0DPA3 235 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 DMTNQ08495 405 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 TCP10Q12799 353 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 CCDC144BQ3MJ40 725 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 FAM177A1Q8N128 213 aaPredicted RBP17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 C17orf53Q8N3J3 647 aaPredicted RBP17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 DHX58Q96C10 678 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 RRP36Q96EU6 259 aaKnown RBP17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 PIGSQ96S52 555 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 UBA5Q9GZZ9 404 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 FAM198AQ9UFP1 575 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 MAN1B1Q9UKM7 699 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 CCDC194A0A1B0GVG4 234 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 YDJCA8MPS7 323 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 IKBKBO14920 756 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 C21orf2O43822 256 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 TTLL1O95922 423 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 SARSP49591 514 aaKnown RBP17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 RBM5P52756 815 aaKnown RBP eCLIP17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 IDI2Q9BXS1 227 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 RIOX1Q9H6W3 641 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 RNF216Q9NWF9 866 aaPredicted RBP17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 PYCARDQ9ULZ3 195 aa17.16■□□□□ 0.34
SH3BP2-229ENST00000515802 DDTLA6NHG4 134 aaPredicted RBP17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 NAPAP54920 295 aa17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 SPATA20Q8TB22 786 aa17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 VAT1LQ9HCJ6 419 aa17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 SERPINA10Q9UK55 444 aa17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 SLFN14P0C7P3 912 aa17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 INF2Q27J81 1249 aa17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 ASPRV1Q53RT3 343 aa17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 CC2D2BQ6DHV5 1058 aa17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 KANK3Q6NY19 840 aa17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 SH3BP5LQ7L8J4 393 aa17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 DEFB132Q7Z7B7 95 aa17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 SEC63Q9UGP8 760 aaKnown RBP17.15■□□□□ 0.34
SH3BP2-229ENST00000515802 FAM196BA6NMK8 535 aa17.14■□□□□ 0.33
SH3BP2-229ENST00000515802 SMTNL1A8MU46 457 aa17.14■□□□□ 0.33
SH3BP2-229ENST00000515802 PPIP5K2O43314 1243 aa17.14■□□□□ 0.33
SH3BP2-229ENST00000515802 SH3RF1Q7Z6J0 888 aa17.14■□□□□ 0.33
SH3BP2-229ENST00000515802 LRMPQ12912 555 aa17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 MORC3Q14149 939 aa17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 SHROOM1Q2M3G4 852 aaPredicted RBP17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 ARL6IP4Q66PJ3 421 aaKnown RBP17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 KIAA1524Q8TCG1 905 aa17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 CCDC12Q8WUD4 166 aaPredicted RBP17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 SMARCE1Q969G3 411 aa17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 DHX36Q9H2U1 1008 aaKnown RBP17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 COL4A5P29400 1685 aa17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 SMCO2A6NFE2 343 aa17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 MPHOSPH10O00566 681 aaKnown RBP17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 MYL5Q02045 173 aa17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 E2F4Q16254 413 aa17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 SUPT20HQ8NEM7 779 aa17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 PAGE5Q96GU1 130 aa17.13■□□□□ 0.33
SH3BP2-229ENST00000515802 KIF13BQ9NQT8 1826 aa17.12■□□□□ 0.33
SH3BP2-229ENST00000515802 LMOD1P29536 600 aaPredicted RBP17.12■□□□□ 0.33
SH3BP2-229ENST00000515802 ZNF543Q08ER8 600 aa17.12■□□□□ 0.33
SH3BP2-229ENST00000515802 TMEM60Q9H2L4 133 aa17.12■□□□□ 0.33
SH3BP2-229ENST00000515802 GPCPD1Q9NPB8 672 aa17.12■□□□□ 0.33
SH3BP2-229ENST00000515802 NPM3O75607 178 aaKnown RBP17.12■□□□□ 0.33
SH3BP2-229ENST00000515802 ATP1A3P13637 1013 aa17.12■□□□□ 0.33
SH3BP2-229ENST00000515802 AFMP43652 599 aa17.12■□□□□ 0.33
SH3BP2-229ENST00000515802 NOLC1Q14978 699 aaKnown RBP eCLIP17.12■□□□□ 0.33
SH3BP2-229ENST00000515802 XPO4Q9C0E2 1151 aaKnown RBP17.12■□□□□ 0.33
SH3BP2-229ENST00000515802 C6orf50Q9HD87 102 aa17.12■□□□□ 0.33
SH3BP2-229ENST00000515802 SPTLC3Q9NUV7 552 aa17.12■□□□□ 0.33
SH3BP2-229ENST00000515802 ARFGEF1Q9Y6D6 1849 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 CASP1P29466 404 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 TPM4P67936 248 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 TTLL6Q8N841 843 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 TRIML1Q8N9V2 468 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 CACTINQ8WUQ7 758 aaKnown RBP17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 CCDC17Q96LX7 622 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 TDRD3Q9H7E2 651 aaKnown RBP17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 IFNKQ9P0W0 207 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 PI4KBQ9UBF8 816 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 ESYT2A0FGR8 921 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 GNA11P29992 359 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 ATP2B2Q01814 1243 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 CFAP100Q494V2 611 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 KRT25Q7Z3Z0 450 aa17.11■□□□□ 0.33
SH3BP2-229ENST00000515802 KCNA3P22001 575 aa17.1■□□□□ 0.33
SH3BP2-229ENST00000515802 CDC25AP30304 524 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms