RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 MAMDC4Q6UXC1 1216 aa14.38□□□□□ -0.11
CSF1R-208ENST00000515239 MSL3Q8N5Y2 521 aaKnown RBP14.38□□□□□ -0.11
CSF1R-208ENST00000515239 VWCEQ96DN2 955 aa14.38□□□□□ -0.11
CSF1R-208ENST00000515239 CD320Q9NPF0 282 aa14.38□□□□□ -0.11
CSF1R-208ENST00000515239 GPR108Q9NPR9 543 aa14.38□□□□□ -0.11
CSF1R-208ENST00000515239 TMX2Q9Y320 296 aa14.38□□□□□ -0.11
CSF1R-208ENST00000515239 UMODL1Q5DID0 1318 aa14.38□□□□□ -0.11
CSF1R-208ENST00000515239 E9PSI1 815 aa14.37□□□□□ -0.11
CSF1R-208ENST00000515239 CTAGE5O15320 804 aa14.37□□□□□ -0.11
CSF1R-208ENST00000515239 TLR3O15455 904 aaKnown RBP14.37□□□□□ -0.11
CSF1R-208ENST00000515239 IDH1O75874 414 aaKnown RBP14.37□□□□□ -0.11
CSF1R-208ENST00000515239 C6orf222P0C671 652 aaPredicted RBP14.37□□□□□ -0.11
CSF1R-208ENST00000515239 GJA9P57773 515 aa14.37□□□□□ -0.11
CSF1R-208ENST00000515239 TNNI3KQ59H18 835 aa14.37□□□□□ -0.11
CSF1R-208ENST00000515239 GNASQ5JWF2 1037 aa14.37□□□□□ -0.11
CSF1R-208ENST00000515239 KRT40Q6A162 431 aa14.37□□□□□ -0.11
CSF1R-208ENST00000515239 MAGEB6Q8N7X4 407 aa14.37□□□□□ -0.11
CSF1R-208ENST00000515239 SNX27Q96L92 541 aa14.37□□□□□ -0.11
CSF1R-208ENST00000515239 RIOK1Q9BRS2 568 aaKnown RBP14.37□□□□□ -0.11
CSF1R-208ENST00000515239 API5Q9BZZ5 524 aaKnown RBP14.37□□□□□ -0.11
CSF1R-208ENST00000515239 UPF3AQ9H1J1 476 aaKnown RBP14.37□□□□□ -0.11
CSF1R-208ENST00000515239 SLC4A7Q9Y6M7 1214 aa14.37□□□□□ -0.11
CSF1R-208ENST00000515239 FPGT-TNNI3KV9GXZ4 949 aa14.37□□□□□ -0.11
CSF1R-208ENST00000515239 SMIM22K7EJ46 135 aa14.36□□□□□ -0.11
CSF1R-208ENST00000515239 VWA5AO00534 786 aa14.36□□□□□ -0.11
CSF1R-208ENST00000515239 POLR3DP05423 398 aaPredicted RBP14.36□□□□□ -0.11
CSF1R-208ENST00000515239 MRE11P49959 708 aa14.36□□□□□ -0.11
CSF1R-208ENST00000515239 SLFN5Q08AF3 891 aa14.36□□□□□ -0.11
CSF1R-208ENST00000515239 TMEM179Q6ZVK1 233 aa14.36□□□□□ -0.11
CSF1R-208ENST00000515239 CLEC10AQ8IUN9 316 aa14.36□□□□□ -0.11
CSF1R-208ENST00000515239 FAM9BQ8IZU0 186 aa14.36□□□□□ -0.11
CSF1R-208ENST00000515239 SLC43A3Q8NBI5 491 aa14.36□□□□□ -0.11
CSF1R-208ENST00000515239 REPS2Q8NFH8 660 aa14.36□□□□□ -0.11
CSF1R-208ENST00000515239 VCPKMTQ9H867 229 aa14.36□□□□□ -0.11
CSF1R-208ENST00000515239 FBXO28Q9NVF7 368 aa14.36□□□□□ -0.11
CSF1R-208ENST00000515239 ZNF214Q9UL59 606 aaPredicted RBP14.36□□□□□ -0.11
CSF1R-208ENST00000515239 PARP14Q460N5 1801 aa14.36□□□□□ -0.11
CSF1R-208ENST00000515239 DNAJC25-GNG10A0A024R161 153 aa14.35□□□□□ -0.11
CSF1R-208ENST00000515239 EPOPA6NHQ4 379 aa14.35□□□□□ -0.11
CSF1R-208ENST00000515239 WDR46O15213 610 aaKnown RBP14.35□□□□□ -0.11
CSF1R-208ENST00000515239 CCL23P55773 120 aa14.35□□□□□ -0.11
CSF1R-208ENST00000515239 ACVR2BQ13705 512 aa14.35□□□□□ -0.11
CSF1R-208ENST00000515239 CCDC144BQ3MJ40 725 aa14.35□□□□□ -0.11
CSF1R-208ENST00000515239 HLA-CQ95604 372 aa14.35□□□□□ -0.11
CSF1R-208ENST00000515239 HIPK3Q9H422 1215 aa14.35□□□□□ -0.11
CSF1R-208ENST00000515239 ZHX1Q9UKY1 873 aaPredicted RBP14.35□□□□□ -0.11
CSF1R-208ENST00000515239 COL11A1P12107 1806 aaPredicted RBP14.35□□□□□ -0.11
CSF1R-208ENST00000515239 TRANK1O15050 2925 aa14.35□□□□□ -0.11
CSF1R-208ENST00000515239 GTPBP6O43824 516 aaPredicted RBP14.34□□□□□ -0.11
CSF1R-208ENST00000515239 ATP2A2P16615 1042 aaKnown RBP14.34□□□□□ -0.11
CSF1R-208ENST00000515239 NKX3-2P78367 333 aa14.34□□□□□ -0.11
CSF1R-208ENST00000515239 WNT8AQ9H1J5 351 aa14.34□□□□□ -0.11
CSF1R-208ENST00000515239 ANTXR1Q9H6X2 564 aa14.34□□□□□ -0.11
CSF1R-208ENST00000515239 CERS4Q9HA82 394 aa14.34□□□□□ -0.11
CSF1R-208ENST00000515239 SPC25Q9HBM1 224 aa14.34□□□□□ -0.11
CSF1R-208ENST00000515239 MCM9Q9NXL9 1143 aa14.34□□□□□ -0.11
CSF1R-208ENST00000515239 LRRC37A2A6NM11 1700 aa14.34□□□□□ -0.11
CSF1R-208ENST00000515239 PRR33A8MZF0 331 aa14.33□□□□□ -0.12
CSF1R-208ENST00000515239 CA3P07451 260 aa14.33□□□□□ -0.12
CSF1R-208ENST00000515239 COPB2P35606 906 aa14.33□□□□□ -0.12
CSF1R-208ENST00000515239 TMEM67Q5HYA8 995 aa14.33□□□□□ -0.12
CSF1R-208ENST00000515239 ZNF467Q7Z7K2 595 aaPredicted RBP14.33□□□□□ -0.12
CSF1R-208ENST00000515239 RPUSD2Q8IZ73 545 aaKnown RBP14.33□□□□□ -0.12
CSF1R-208ENST00000515239 DDX11Q96FC9 970 aa14.33□□□□□ -0.12
CSF1R-208ENST00000515239 NOC4LQ9BVI4 516 aaKnown RBP14.33□□□□□ -0.12
CSF1R-208ENST00000515239 ARHGEF10LQ9HCE6 1279 aa14.33□□□□□ -0.12
CSF1R-208ENST00000515239 DBNLQ9UJU6 430 aaKnown RBP14.33□□□□□ -0.12
CSF1R-208ENST00000515239 PPP1R9AQ9ULJ8 1098 aa14.33□□□□□ -0.12
CSF1R-208ENST00000515239 RIPK3Q9Y572 518 aa14.33□□□□□ -0.12
CSF1R-208ENST00000515239 GRIN2DO15399 1336 aa14.33□□□□□ -0.12
CSF1R-208ENST00000515239 AKR1B1P15121 316 aa14.32□□□□□ -0.12
CSF1R-208ENST00000515239 BEX3Q00994 111 aa14.32□□□□□ -0.12
CSF1R-208ENST00000515239 ICA1Q05084 483 aa14.32□□□□□ -0.12
CSF1R-208ENST00000515239 TTLL4Q14679 1199 aa14.32□□□□□ -0.12
CSF1R-208ENST00000515239 CXCL17Q6UXB2 119 aa14.32□□□□□ -0.12
CSF1R-208ENST00000515239 DYNLL2Q96FJ2 89 aa14.32□□□□□ -0.12
CSF1R-208ENST00000515239 AGBL1Q96MI9 1066 aa14.32□□□□□ -0.12
CSF1R-208ENST00000515239 TRPV6Q9H1D0 765 aa14.32□□□□□ -0.12
CSF1R-208ENST00000515239 ABHD16BQ9H3Z7 469 aa14.32□□□□□ -0.12
CSF1R-208ENST00000515239 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.32□□□□□ -0.12
CSF1R-208ENST00000515239 TLR7Q9NYK1 1049 aaKnown RBP14.32□□□□□ -0.12
CSF1R-208ENST00000515239 ZBBXA8MT70 800 aa14.31□□□□□ -0.12
CSF1R-208ENST00000515239 ARHGEF15O94989 841 aa14.31□□□□□ -0.12
CSF1R-208ENST00000515239 GNAI2P04899 355 aa14.31□□□□□ -0.12
CSF1R-208ENST00000515239 CYP2D6P10635 497 aa14.31□□□□□ -0.12
CSF1R-208ENST00000515239 TMED8Q6PL24 325 aaPredicted RBP14.31□□□□□ -0.12
CSF1R-208ENST00000515239 TRMT2AQ8IZ69 625 aaKnown RBP14.31□□□□□ -0.12
CSF1R-208ENST00000515239 FGD4Q96M96 766 aa14.31□□□□□ -0.12
CSF1R-208ENST00000515239 KATNBL1Q9H079 304 aa14.31□□□□□ -0.12
CSF1R-208ENST00000515239 SH2D4AQ9H788 454 aa14.31□□□□□ -0.12
CSF1R-208ENST00000515239 MAGEB6P1A0A0J9YX57 407 aa14.3□□□□□ -0.12
CSF1R-208ENST00000515239 B4GALT4O60513 344 aa14.3□□□□□ -0.12
CSF1R-208ENST00000515239 LPXNO60711 386 aa14.3□□□□□ -0.12
CSF1R-208ENST00000515239 EEF2P13639 858 aaKnown RBP14.3□□□□□ -0.12
CSF1R-208ENST00000515239 TAP1Q03518 808 aa14.3□□□□□ -0.12
CSF1R-208ENST00000515239 ITGA7Q13683 1181 aa14.3□□□□□ -0.12
CSF1R-208ENST00000515239 POLA2Q14181 598 aa14.3□□□□□ -0.12
CSF1R-208ENST00000515239 EAF2Q96CJ1 260 aaPredicted RBP14.3□□□□□ -0.12
CSF1R-208ENST00000515239 SCLYQ96I15 445 aa14.3□□□□□ -0.12
CSF1R-208ENST00000515239 CRNKL1Q9BZJ0 848 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms