RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 MINDY4BA8MYZ0 360 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 ADAMTS4O75173 837 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 NDUFB10O96000 172 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 CLTBP09497 229 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 GNAT2P19087 354 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 SMAD3P84022 425 aaKnown RBP17.97■□□□□ 0.47
DDR1-278ENST00000515233 C20orf194Q5TEA3 1177 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.97■□□□□ 0.47
DDR1-278ENST00000515233 DDX11Q96FC9 970 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 NUP88Q99567 741 aaPredicted RBP17.97■□□□□ 0.47
DDR1-278ENST00000515233 ZNF287Q9HBT7 754 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 CLIP2Q9UDT6 1046 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 SYNPO2Q9UMS6 1093 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 RIPK3Q9Y572 518 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
DDR1-278ENST00000515233 A0A1W2PQ45 241 aaPredicted RBP17.96■□□□□ 0.47
DDR1-278ENST00000515233 A0A1W2PQY0 241 aa17.96■□□□□ 0.47
DDR1-278ENST00000515233 KIAA0355O15063 1070 aa17.96■□□□□ 0.47
DDR1-278ENST00000515233 RNF113AO15541 343 aaKnown RBP17.96■□□□□ 0.47
DDR1-278ENST00000515233 SNAI1O95863 264 aaPredicted RBP17.96■□□□□ 0.47
DDR1-278ENST00000515233 SNRNP48Q6IEG0 339 aaKnown RBP17.96■□□□□ 0.47
DDR1-278ENST00000515233 ZNF467Q7Z7K2 595 aaPredicted RBP17.96■□□□□ 0.47
DDR1-278ENST00000515233 ZNF444Q8N0Y2 327 aaPredicted RBP17.96■□□□□ 0.47
DDR1-278ENST00000515233 GPATCH3Q96I76 525 aa17.96■□□□□ 0.47
DDR1-278ENST00000515233 FAM161BQ96MY7 647 aa17.96■□□□□ 0.47
DDR1-278ENST00000515233 TOX2Q96NM4 488 aa17.96■□□□□ 0.47
DDR1-278ENST00000515233 SEMA6BQ9H3T3 888 aa17.96■□□□□ 0.47
DDR1-278ENST00000515233 FAM184BQ9ULE4 1060 aa17.96■□□□□ 0.47
DDR1-278ENST00000515233 PATL2C9JE40 543 aaKnown RBP17.95■□□□□ 0.46
DDR1-278ENST00000515233 ZBED4O75132 1171 aa17.95■□□□□ 0.46
DDR1-278ENST00000515233 ITGB8P26012 769 aa17.95■□□□□ 0.46
DDR1-278ENST00000515233 ANKRD33Q7Z3H0 272 aa17.95■□□□□ 0.46
DDR1-278ENST00000515233 STK11IPQ8N1F8 1099 aa17.95■□□□□ 0.46
DDR1-278ENST00000515233 KLHDC9Q8NEP7 349 aa17.95■□□□□ 0.46
DDR1-278ENST00000515233 EPB41L4AQ9HCS5 686 aaPredicted RBP17.95■□□□□ 0.46
DDR1-278ENST00000515233 UNC80Q8N2C7 3258 aa17.95■□□□□ 0.46
DDR1-278ENST00000515233 MYH4Q9Y623 1939 aa17.94■□□□□ 0.46
DDR1-278ENST00000515233 MOXD2PA6NHM9 499 aa17.94■□□□□ 0.46
DDR1-278ENST00000515233 GPAA1O43292 621 aa17.94■□□□□ 0.46
DDR1-278ENST00000515233 ACLYP53396 1101 aa17.94■□□□□ 0.46
DDR1-278ENST00000515233 CCSAPQ6IQ19 270 aaPredicted RBP17.94■□□□□ 0.46
DDR1-278ENST00000515233 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.94■□□□□ 0.46
DDR1-278ENST00000515233 IFNL3Q8IZI9 196 aa17.94■□□□□ 0.46
DDR1-278ENST00000515233 NUP133Q8WUM0 1156 aa17.94■□□□□ 0.46
DDR1-278ENST00000515233 CDX2Q99626 313 aaPredicted RBP17.94■□□□□ 0.46
DDR1-278ENST00000515233 SLC38A10Q9HBR0 1119 aa17.94■□□□□ 0.46
DDR1-278ENST00000515233 MTMR4Q9NYA4 1195 aa17.94■□□□□ 0.46
DDR1-278ENST00000515233 FEM1BQ9UK73 627 aa17.94■□□□□ 0.46
DDR1-278ENST00000515233 DUSP11O75319 330 aaKnown RBP17.93■□□□□ 0.46
DDR1-278ENST00000515233 RAG1P15918 1043 aa17.93■□□□□ 0.46
DDR1-278ENST00000515233 TDO2P48775 406 aa17.93■□□□□ 0.46
DDR1-278ENST00000515233 OAZ1P54368 228 aa17.93■□□□□ 0.46
DDR1-278ENST00000515233 FAAP100Q0VG06 881 aa17.93■□□□□ 0.46
DDR1-278ENST00000515233 LRRFIP1Q32MZ4 808 aaKnown RBP17.93■□□□□ 0.46
DDR1-278ENST00000515233 CPXCR1Q8N123 301 aa17.93■□□□□ 0.46
DDR1-278ENST00000515233 GMCL1P1Q8NEA9 526 aa17.93■□□□□ 0.46
DDR1-278ENST00000515233 CHST13Q8NET6 341 aa17.93■□□□□ 0.46
DDR1-278ENST00000515233 CEP95Q96GE4 821 aa17.93■□□□□ 0.46
DDR1-278ENST00000515233 STARD7Q9NQZ5 370 aa17.93■□□□□ 0.46
DDR1-278ENST00000515233 FBXO40Q9UH90 709 aa17.93■□□□□ 0.46
DDR1-278ENST00000515233 SYNRGQ9UMZ2 1314 aa17.93■□□□□ 0.46
DDR1-278ENST00000515233 TTLL1O95922 423 aa17.92■□□□□ 0.46
DDR1-278ENST00000515233 APPP05067 770 aa17.92■□□□□ 0.46
DDR1-278ENST00000515233 FDX1P10109 184 aa17.92■□□□□ 0.46
DDR1-278ENST00000515233 CST5P28325 142 aaPredicted RBP17.92■□□□□ 0.46
DDR1-278ENST00000515233 ACVR2BQ13705 512 aa17.92■□□□□ 0.46
DDR1-278ENST00000515233 KCNA10Q16322 511 aa17.92■□□□□ 0.46
DDR1-278ENST00000515233 NEDD1Q8NHV4 660 aa17.92■□□□□ 0.46
DDR1-278ENST00000515233 KIFC2Q96AC6 838 aa17.92■□□□□ 0.46
DDR1-278ENST00000515233 LENG1Q96BZ8 264 aaPredicted RBP17.92■□□□□ 0.46
DDR1-278ENST00000515233 ABHD16BQ9H3Z7 469 aa17.92■□□□□ 0.46
DDR1-278ENST00000515233 RAVER2Q9HCJ3 691 aaKnown RBP17.92■□□□□ 0.46
DDR1-278ENST00000515233 TMEM39AQ9NV64 488 aa17.92■□□□□ 0.46
DDR1-278ENST00000515233 CTDP1Q9Y5B0 961 aaPredicted RBP17.92■□□□□ 0.46
DDR1-278ENST00000515233 TMEM265A0A087WTH1 108 aa17.91■□□□□ 0.46
DDR1-278ENST00000515233 DCDC2CA8MYV0 355 aa17.91■□□□□ 0.46
DDR1-278ENST00000515233 M0R2C6 588 aa17.91■□□□□ 0.46
DDR1-278ENST00000515233 PQBP1O60828 265 aaKnown RBP17.91■□□□□ 0.46
DDR1-278ENST00000515233 PRDM1O75626 825 aa17.91■□□□□ 0.46
DDR1-278ENST00000515233 EPHB4P54760 987 aa17.91■□□□□ 0.46
DDR1-278ENST00000515233 ANKRD35Q8N283 1001 aa17.91■□□□□ 0.46
DDR1-278ENST00000515233 COL25A1Q9BXS0 654 aaPredicted RBP17.91■□□□□ 0.46
DDR1-278ENST00000515233 TTYH1Q9H313 450 aaPredicted RBP17.91■□□□□ 0.46
DDR1-278ENST00000515233 ZHX1Q9UKY1 873 aaPredicted RBP17.91■□□□□ 0.46
DDR1-278ENST00000515233 ELP1O95163 1332 aa17.91■□□□□ 0.46
DDR1-278ENST00000515233 TTC41PQ6P2S7 1318 aa17.91■□□□□ 0.46
DDR1-278ENST00000515233 PLIN4Q96Q06 1357 aa17.91■□□□□ 0.46
DDR1-278ENST00000515233 BMP3P12645 472 aa17.9■□□□□ 0.46
DDR1-278ENST00000515233 SLC4A3P48751 1232 aa17.9■□□□□ 0.46
DDR1-278ENST00000515233 CDK7P50613 346 aa17.9■□□□□ 0.46
DDR1-278ENST00000515233 FPGSQ05932 587 aa17.9■□□□□ 0.46
DDR1-278ENST00000515233 PDE4BQ07343 736 aa17.9■□□□□ 0.46
DDR1-278ENST00000515233 TSHZ3Q63HK5 1081 aa17.9■□□□□ 0.46
DDR1-278ENST00000515233 PCSK9Q8NBP7 692 aaKnown RBP17.9■□□□□ 0.46
DDR1-278ENST00000515233 FGD4Q96M96 766 aa17.9■□□□□ 0.46
DDR1-278ENST00000515233 GLT1D1Q96MS3 346 aa17.9■□□□□ 0.46
DDR1-278ENST00000515233 NACAP1Q9BZK3 213 aa17.9■□□□□ 0.46
DDR1-278ENST00000515233 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.9■□□□□ 0.46
DDR1-278ENST00000515233 TIMP1P01033 207 aa17.89■□□□□ 0.45
DDR1-278ENST00000515233 GJA9P57773 515 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms