RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 USP28Q96RU2 1077 aa17.67■□□□□ 0.42
TRIM41-207ENST00000515223 TMEM2Q9UHN6 1383 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 EBAG9O00559 213 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 OSBPP22059 807 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 BEND3Q5T5X7 828 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 AP5M1Q9H0R1 490 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 TRPM1Q7Z4N2 1603 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 ABCB5Q2M3G0 1257 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 RDH13Q8NBN7 331 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 IQCDQ96DY2 449 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 CCDC17Q96LX7 622 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 RPS6KC1Q96S38 1066 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 TEKT3Q9BXF9 490 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 PCDHA12Q9UN75 941 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 SECISBP2LQ93073 1101 aaKnown RBP17.66■□□□□ 0.42
TRIM41-207ENST00000515223 LARSQ9P2J5 1176 aaKnown RBP17.66■□□□□ 0.42
TRIM41-207ENST00000515223 SLFN13Q68D06 897 aa17.66■□□□□ 0.42
TRIM41-207ENST00000515223 ZSCAN10Q96SZ4 725 aaPredicted RBP17.66■□□□□ 0.42
TRIM41-207ENST00000515223 FEZ2Q9UHY8 353 aaPredicted RBP17.66■□□□□ 0.42
TRIM41-207ENST00000515223 XPOTO43592 962 aaKnown RBP17.65■□□□□ 0.42
TRIM41-207ENST00000515223 PPP2R5CQ13362 524 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 CUL4AQ13619 759 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 POSTNQ15063 836 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 MUM1L1Q5H9M0 696 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 SFMBT2Q5VUG0 894 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 CCDC89Q8N998 374 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 PNMA1Q8ND90 353 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 MMS19Q96T76 1030 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 CCPG1Q9ULG6 757 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 YEATS2Q9ULM3 1422 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 hCG_1642624A0A1W2PR95 340 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 ARHGAP44Q17R89 818 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 PDZD4Q76G19 769 aaPredicted RBP17.65■□□□□ 0.42
TRIM41-207ENST00000515223 ARMC9Q7Z3E5 817 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 GPBP1Q86WP2 473 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 MRRFQ96E11 262 aaKnown RBP17.65■□□□□ 0.42
TRIM41-207ENST00000515223 E7EWF7 191 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 ADKP55263 362 aaKnown RBP17.65■□□□□ 0.42
TRIM41-207ENST00000515223 XDHP47989 1333 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 PPEF1O14829 653 aaPredicted RBP17.65■□□□□ 0.42
TRIM41-207ENST00000515223 GIGYF1O75420 1035 aaPredicted RBP17.65■□□□□ 0.42
TRIM41-207ENST00000515223 CIB2O75838 187 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 LARGE1O95461 756 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 PLCB4Q15147 1175 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 TMTC1Q8IUR5 882 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 PLA2R1Q13018 1463 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 LEMD3Q9Y2U8 911 aa17.65■□□□□ 0.42
TRIM41-207ENST00000515223 SEMA3EO15041 775 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 TRIM50Q86XT4 487 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 BLIDQ8IZY5 108 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 ZNF804BA4D1E1 1349 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 SPDYE16A6NNV3 312 aaPredicted RBP17.64■□□□□ 0.41
TRIM41-207ENST00000515223 CEP104O60308 925 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 N4BP1O75113 896 aaKnown RBP17.64■□□□□ 0.41
TRIM41-207ENST00000515223 FOSP01100 380 aaPredicted RBP17.64■□□□□ 0.41
TRIM41-207ENST00000515223 SPDYE2Q495Y8 402 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 NELFBQ8WX92 580 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 KLRF2D3W0D1 207 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 KCNQ3O43525 872 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 TRIM37O94972 964 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 XRCC5P13010 732 aaKnown RBP17.64■□□□□ 0.41
TRIM41-207ENST00000515223 USP14P54578 494 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 GALNT17Q6IS24 598 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 LRRC47Q8N1G4 583 aaKnown RBP17.64■□□□□ 0.41
TRIM41-207ENST00000515223 JPH2Q9BR39 696 aaPredicted RBP17.64■□□□□ 0.41
TRIM41-207ENST00000515223 VIMP08670 466 aaKnown RBP17.64■□□□□ 0.41
TRIM41-207ENST00000515223 TMEM191BP0C7N4 346 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 POLGP54098 1239 aaPredicted RBP17.64■□□□□ 0.41
TRIM41-207ENST00000515223 SARNPP82979 210 aaKnown RBP17.64■□□□□ 0.41
TRIM41-207ENST00000515223 TFDP1Q14186 410 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 PLA2G4DQ86XP0 818 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 IFNL3Q8IZI9 196 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 TAB2Q9NYJ8 693 aa17.64■□□□□ 0.41
TRIM41-207ENST00000515223 FRMPD2Q68DX3 1309 aaPredicted RBP17.64■□□□□ 0.41
TRIM41-207ENST00000515223 TMEM232C9JQI7 657 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 CYP2J2P51589 502 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 RNASE9P60153 205 aaKnown RBP17.63■□□□□ 0.41
TRIM41-207ENST00000515223 CHRNDQ07001 517 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 FAM76AQ8TAV0 307 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 MYO1AQ9UBC5 1043 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 NFE2L3Q9Y4A8 694 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 NUB1Q9Y5A7 615 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 SDCCAG8Q86SQ7 713 aaPredicted RBP17.63■□□□□ 0.41
TRIM41-207ENST00000515223 C1orf112Q9NSG2 853 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 STAT1P42224 750 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 BCAMP50895 628 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 PPFIBP2Q8ND30 876 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 TSKSQ9UJT2 592 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 MAP3K15Q6ZN16 1313 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 PFDN6O15212 129 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 PDE6AP16499 860 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 DESI2Q9BSY9 194 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 PEX26Q7Z412 305 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
TRIM41-207ENST00000515223 PCP11498 1178 aaKnown RBP17.62■□□□□ 0.41
TRIM41-207ENST00000515223 POLR2BP30876 1174 aaKnown RBP17.62■□□□□ 0.41
TRIM41-207ENST00000515223 MAP7Q14244 749 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 HADHQ16836 314 aaKnown RBP17.62■□□□□ 0.41
TRIM41-207ENST00000515223 TTLL7Q6ZT98 887 aa17.62■□□□□ 0.41
TRIM41-207ENST00000515223 IFT20Q8IY31 132 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms