RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 IL25Q9H293 177 aa17.42■□□□□ 0.38
SGCA-211ENST00000514934 SLC38A10Q9HBR0 1119 aa17.42■□□□□ 0.38
SGCA-211ENST00000514934 ZNF287Q9HBT7 754 aa17.42■□□□□ 0.38
SGCA-211ENST00000514934 DNAJC25-GNG10A0A024R161 153 aa17.41■□□□□ 0.38
SGCA-211ENST00000514934 TSPY3P0CV98 308 aa17.41■□□□□ 0.38
SGCA-211ENST00000514934 TSPY8P0CW00 308 aa17.41■□□□□ 0.38
SGCA-211ENST00000514934 STAT3P40763 770 aa17.41■□□□□ 0.38
SGCA-211ENST00000514934 ZNF792Q3KQV3 632 aa17.41■□□□□ 0.38
SGCA-211ENST00000514934 MFSD14CQ5VZR4 134 aa17.41■□□□□ 0.38
SGCA-211ENST00000514934 PRPF38AQ8NAV1 312 aaKnown RBP17.41■□□□□ 0.38
SGCA-211ENST00000514934 GMCL1Q96IK5 515 aa17.41■□□□□ 0.38
SGCA-211ENST00000514934 ZBTB47Q9UFB7 747 aaPredicted RBP17.41■□□□□ 0.38
SGCA-211ENST00000514934 ZNF536O15090 1300 aa17.41■□□□□ 0.38
SGCA-211ENST00000514934 SLFN13Q68D06 897 aa17.4■□□□□ 0.38
SGCA-211ENST00000514934 TBC1D10CQ8IV04 446 aa17.4■□□□□ 0.38
SGCA-211ENST00000514934 DPF3Q92784 378 aa17.4■□□□□ 0.38
SGCA-211ENST00000514934 DDX20Q9UHI6 824 aaKnown RBP17.4■□□□□ 0.38
SGCA-211ENST00000514934 PGK2P07205 417 aa17.39■□□□□ 0.37
SGCA-211ENST00000514934 FCER1AP12319 257 aa17.39■□□□□ 0.37
SGCA-211ENST00000514934 GSPT1P15170 499 aaKnown RBP17.39■□□□□ 0.37
SGCA-211ENST00000514934 FXR1P51114 621 aaKnown RBP eCLIP17.39■□□□□ 0.37
SGCA-211ENST00000514934 RCSD1Q6JBY9 416 aa17.39■□□□□ 0.37
SGCA-211ENST00000514934 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
SGCA-211ENST00000514934 DPP9Q86TI2 863 aa17.39■□□□□ 0.37
SGCA-211ENST00000514934 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.37
SGCA-211ENST00000514934 C11orf49Q9H6J7 331 aa17.39■□□□□ 0.37
SGCA-211ENST00000514934 CWC22Q9HCG8 908 aaKnown RBP17.39■□□□□ 0.37
SGCA-211ENST00000514934 FEM1BQ9UK73 627 aa17.39■□□□□ 0.37
SGCA-211ENST00000514934 TRIM6-TRIM34B2RNG4 842 aa17.38■□□□□ 0.37
SGCA-211ENST00000514934 PLA2G6O60733 806 aa17.38■□□□□ 0.37
SGCA-211ENST00000514934 SLC3A2P08195 630 aaKnown RBP17.38■□□□□ 0.37
SGCA-211ENST00000514934 PRAMEF19Q5SWL8 479 aa17.38■□□□□ 0.37
SGCA-211ENST00000514934 MMP19Q99542 508 aa17.38■□□□□ 0.37
SGCA-211ENST00000514934 RBM27Q9P2N5 1060 aaKnown RBP17.38■□□□□ 0.37
SGCA-211ENST00000514934 DIS3Q9Y2L1 958 aaKnown RBP17.38■□□□□ 0.37
SGCA-211ENST00000514934 RAD21O60216 631 aa17.37■□□□□ 0.37
SGCA-211ENST00000514934 BMP3P12645 472 aa17.37■□□□□ 0.37
SGCA-211ENST00000514934 TAL1P17542 331 aaPredicted RBP17.37■□□□□ 0.37
SGCA-211ENST00000514934 OAZ1P54368 228 aa17.37■□□□□ 0.37
SGCA-211ENST00000514934 IRX6P78412 446 aaPredicted RBP17.37■□□□□ 0.37
SGCA-211ENST00000514934 SNRNP48Q6IEG0 339 aaKnown RBP17.37■□□□□ 0.37
SGCA-211ENST00000514934 CHRDL2Q6WN34 429 aa17.37■□□□□ 0.37
SGCA-211ENST00000514934 RILPL2Q969X0 211 aa17.37■□□□□ 0.37
SGCA-211ENST00000514934 TCP11L1Q9NUJ3 509 aa17.37■□□□□ 0.37
SGCA-211ENST00000514934 NEDD4P46934 1319 aa17.37■□□□□ 0.37
SGCA-211ENST00000514934 TSPY2A6NKD2 308 aa17.36■□□□□ 0.37
SGCA-211ENST00000514934 SEPT4O43236 478 aa17.36■□□□□ 0.37
SGCA-211ENST00000514934 COPB2P35606 906 aa17.36■□□□□ 0.37
SGCA-211ENST00000514934 HAND2P61296 217 aa17.36■□□□□ 0.37
SGCA-211ENST00000514934 LRRC26Q2I0M4 334 aa17.36■□□□□ 0.37
SGCA-211ENST00000514934 STAG1Q8WVM7 1258 aa17.36■□□□□ 0.37
SGCA-211ENST00000514934 KIFC2Q96AC6 838 aa17.36■□□□□ 0.37
SGCA-211ENST00000514934 RAVER2Q9HCJ3 691 aaKnown RBP17.36■□□□□ 0.37
SGCA-211ENST00000514934 COL6A3P12111 3177 aa17.36■□□□□ 0.37
SGCA-211ENST00000514934 EVI5O60447 810 aa17.35■□□□□ 0.37
SGCA-211ENST00000514934 RANBP6O60518 1105 aaKnown RBP17.35■□□□□ 0.37
SGCA-211ENST00000514934 MSCO60682 206 aa17.35■□□□□ 0.37
SGCA-211ENST00000514934 ZNF865P0CJ78 1059 aaPredicted RBP17.35■□□□□ 0.37
SGCA-211ENST00000514934 MCCP23508 829 aa17.35■□□□□ 0.37
SGCA-211ENST00000514934 MAMDC4Q6UXC1 1216 aa17.35■□□□□ 0.37
SGCA-211ENST00000514934 TINF2Q9BSI4 451 aa17.35■□□□□ 0.37
SGCA-211ENST00000514934 NRBP1Q9UHY1 535 aa17.35■□□□□ 0.37
SGCA-211ENST00000514934 NR2E3Q9Y5X4 410 aa17.35■□□□□ 0.37
SGCA-211ENST00000514934 ASTN1O14525 1302 aa17.35■□□□□ 0.37
SGCA-211ENST00000514934 TMEM232C9JQI7 657 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 DNM1LO00429 736 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 SNAI1O95863 264 aaPredicted RBP17.34■□□□□ 0.37
SGCA-211ENST00000514934 STAT2P52630 851 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 KCTD2Q14681 263 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 AKNAD1Q5T1N1 836 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 TTC22Q5TAA0 569 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 ANO1Q5XXA6 986 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 CWC27Q6UX04 472 aaKnown RBP17.34■□□□□ 0.37
SGCA-211ENST00000514934 BTNL9Q6UXG8 535 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 KCTD1Q719H9 257 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 GDF15Q99988 308 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 TMEM47Q9BQJ4 181 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 KATNBL1Q9H079 304 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 STX8Q9UNK0 236 aa17.34■□□□□ 0.37
SGCA-211ENST00000514934 BAZ2BQ9UIF8 2168 aaKnown RBP17.33■□□□□ 0.37
SGCA-211ENST00000514934 SNHG28P0DPA3 235 aa17.33■□□□□ 0.36
SGCA-211ENST00000514934 SLC1A4P43007 532 aa17.33■□□□□ 0.36
SGCA-211ENST00000514934 ZNF467Q7Z7K2 595 aaPredicted RBP17.33■□□□□ 0.36
SGCA-211ENST00000514934 C7orf61Q8IZ16 206 aa17.33■□□□□ 0.36
SGCA-211ENST00000514934 CPXCR1Q8N123 301 aa17.33■□□□□ 0.36
SGCA-211ENST00000514934 PRR12Q9ULL5 1215 aa17.33■□□□□ 0.36
SGCA-211ENST00000514934 SYNGAP1Q96PV0 1343 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 KIAA1217Q5T5P2 1943 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 ADCY6O43306 1168 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 ZBED4O75132 1171 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 FDX1P10109 184 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 PCP11498 1178 aaKnown RBP17.32■□□□□ 0.36
SGCA-211ENST00000514934 CNGA1P29973 690 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 SNX17Q15036 470 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 PPP4R3BQ5MIZ7 849 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 TTBK2Q6IQ55 1244 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 FAM160B2Q86V87 743 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 MSL3Q8N5Y2 521 aaKnown RBP17.32■□□□□ 0.36
SGCA-211ENST00000514934 FAM133AQ8N9E0 248 aa17.32■□□□□ 0.36
SGCA-211ENST00000514934 CHST13Q8NET6 341 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms