RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 EPHB4P54760 987 aa27.4■■□□□ 1.98
SMAD1-214ENST00000514831 ANKRD33Q7Z3H0 272 aa27.4■■□□□ 1.98
SMAD1-214ENST00000514831 TOX2Q96NM4 488 aa27.4■■□□□ 1.98
SMAD1-214ENST00000514831 RASA1P20936 1047 aa27.39■■□□□ 1.98
SMAD1-214ENST00000514831 FPGSQ05932 587 aa27.39■■□□□ 1.98
SMAD1-214ENST00000514831 SBK1Q52WX2 424 aa27.39■■□□□ 1.98
SMAD1-214ENST00000514831 NUP88Q99567 741 aaPredicted RBP27.39■■□□□ 1.98
SMAD1-214ENST00000514831 NYAP2Q9P242 653 aa27.39■■□□□ 1.98
SMAD1-214ENST00000514831 MCM3APO60318 1980 aa27.39■■□□□ 1.97
SMAD1-214ENST00000514831 DNAJC25-GNG10A0A024R161 153 aa27.38■■□□□ 1.97
SMAD1-214ENST00000514831 MOXD2PA6NHM9 499 aa27.38■■□□□ 1.97
SMAD1-214ENST00000514831 FOSL2P15408 326 aa27.38■■□□□ 1.97
SMAD1-214ENST00000514831 ACLYP53396 1101 aa27.38■■□□□ 1.97
SMAD1-214ENST00000514831 SNRNP48Q6IEG0 339 aaKnown RBP27.38■■□□□ 1.97
SMAD1-214ENST00000514831 MAMDC4Q6UXC1 1216 aa27.38■■□□□ 1.97
SMAD1-214ENST00000514831 NUP133Q8WUM0 1156 aa27.38■■□□□ 1.97
SMAD1-214ENST00000514831 CHMP4BQ9H444 224 aaKnown RBP27.38■■□□□ 1.97
SMAD1-214ENST00000514831 STARD7Q9NQZ5 370 aa27.38■■□□□ 1.97
SMAD1-214ENST00000514831 TMEM39AQ9NV64 488 aa27.38■■□□□ 1.97
SMAD1-214ENST00000514831 ATP2A1O14983 1001 aa27.37■■□□□ 1.97
SMAD1-214ENST00000514831 FAAP100Q0VG06 881 aa27.37■■□□□ 1.97
SMAD1-214ENST00000514831 KLHDC9Q8NEP7 349 aa27.37■■□□□ 1.97
SMAD1-214ENST00000514831 LRRCC1Q9C099 1032 aa27.37■■□□□ 1.97
SMAD1-214ENST00000514831 FAM184BQ9ULE4 1060 aa27.37■■□□□ 1.97
SMAD1-214ENST00000514831 SNAI1O95863 264 aaPredicted RBP27.36■■□□□ 1.97
SMAD1-214ENST00000514831 NDUFB10O96000 172 aa27.36■■□□□ 1.97
SMAD1-214ENST00000514831 CCSAPQ6IQ19 270 aaPredicted RBP27.36■■□□□ 1.97
SMAD1-214ENST00000514831 GIMAP6Q6P9H5 292 aa27.36■■□□□ 1.97
SMAD1-214ENST00000514831 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.36■■□□□ 1.97
SMAD1-214ENST00000514831 ZNF467Q7Z7K2 595 aaPredicted RBP27.36■■□□□ 1.97
SMAD1-214ENST00000514831 PRPF38AQ8NAV1 312 aaKnown RBP27.36■■□□□ 1.97
SMAD1-214ENST00000514831 DDX11Q96FC9 970 aa27.36■■□□□ 1.97
SMAD1-214ENST00000514831 STRBPQ96SI9 672 aaKnown RBP27.36■■□□□ 1.97
SMAD1-214ENST00000514831 RIPK3Q9Y572 518 aa27.36■■□□□ 1.97
SMAD1-214ENST00000514831 VCANP13611 3396 aa27.36■■□□□ 1.97
SMAD1-214ENST00000514831 DCDC2CA8MYV0 355 aa27.35■■□□□ 1.97
SMAD1-214ENST00000514831 F5H6K3 240 aa27.35■■□□□ 1.97
SMAD1-214ENST00000514831 CST5P28325 142 aaPredicted RBP27.35■■□□□ 1.97
SMAD1-214ENST00000514831 KLRC3Q07444 240 aa27.35■■□□□ 1.97
SMAD1-214ENST00000514831 ZHX1Q9UKY1 873 aaPredicted RBP27.35■■□□□ 1.97
SMAD1-214ENST00000514831 GSG1L2A8MUP6 293 aa27.34■■□□□ 1.97
SMAD1-214ENST00000514831 DUSP11O75319 330 aaKnown RBP27.34■■□□□ 1.97
SMAD1-214ENST00000514831 MKNK2Q9HBH9 465 aa27.34■■□□□ 1.97
SMAD1-214ENST00000514831 TBX21Q9UL17 535 aa27.34■■□□□ 1.97
SMAD1-214ENST00000514831 IGKV6D-41A0A0C4DH26 115 aa27.33■■□□□ 1.97
SMAD1-214ENST00000514831 KCNA10Q16322 511 aa27.33■■□□□ 1.97
SMAD1-214ENST00000514831 MIER1Q8N108 512 aa27.33■■□□□ 1.97
SMAD1-214ENST00000514831 MROH7Q68CQ1 1323 aa27.33■■□□□ 1.97
SMAD1-214ENST00000514831 MYADML2A6NDP7 307 aa27.32■■□□□ 1.96
SMAD1-214ENST00000514831 ECHDC1Q9NTX5 307 aa27.32■■□□□ 1.96
SMAD1-214ENST00000514831 ELP1O95163 1332 aa27.32■■□□□ 1.96
SMAD1-214ENST00000514831 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.31■■□□□ 1.96
SMAD1-214ENST00000514831 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.31■■□□□ 1.96
SMAD1-214ENST00000514831 ZBED4O75132 1171 aa27.31■■□□□ 1.96
SMAD1-214ENST00000514831 TIMP1P01033 207 aa27.31■■□□□ 1.96
SMAD1-214ENST00000514831 DNAJB2P25686 324 aa27.31■■□□□ 1.96
SMAD1-214ENST00000514831 ACVR2BQ13705 512 aa27.31■■□□□ 1.96
SMAD1-214ENST00000514831 CPXCR1Q8N123 301 aa27.31■■□□□ 1.96
SMAD1-214ENST00000514831 STK11IPQ8N1F8 1099 aa27.31■■□□□ 1.96
SMAD1-214ENST00000514831 KBTBD3Q8NAB2 608 aa27.31■■□□□ 1.96
SMAD1-214ENST00000514831 APPBP2Q92624 585 aa27.31■■□□□ 1.96
SMAD1-214ENST00000514831 GLT1D1Q96MS3 346 aa27.31■■□□□ 1.96
SMAD1-214ENST00000514831 SLC38A10Q9HBR0 1119 aa27.31■■□□□ 1.96
SMAD1-214ENST00000514831 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.31■■□□□ 1.96
SMAD1-214ENST00000514831 SYNPO2Q9UMS6 1093 aa27.31■■□□□ 1.96
SMAD1-214ENST00000514831 PRUNE2Q8WUY3 3088 aa27.3■■□□□ 1.96
SMAD1-214ENST00000514831 MINDY4BA8MYZ0 360 aa27.3■■□□□ 1.96
SMAD1-214ENST00000514831 ADCY6O43306 1168 aa27.3■■□□□ 1.96
SMAD1-214ENST00000514831 SMARCA5O60264 1052 aaPredicted RBP27.3■■□□□ 1.96
SMAD1-214ENST00000514831 PCSK9Q8NBP7 692 aaKnown RBP27.3■■□□□ 1.96
SMAD1-214ENST00000514831 OSBP2Q969R2 916 aa27.3■■□□□ 1.96
SMAD1-214ENST00000514831 FGD4Q96M96 766 aa27.3■■□□□ 1.96
SMAD1-214ENST00000514831 UPF3AQ9H1J1 476 aaKnown RBP27.3■■□□□ 1.96
SMAD1-214ENST00000514831 ABHD16BQ9H3Z7 469 aa27.3■■□□□ 1.96
SMAD1-214ENST00000514831 EPB41L4AQ9HCS5 686 aaPredicted RBP27.3■■□□□ 1.96
SMAD1-214ENST00000514831 CLIP2Q9UDT6 1046 aa27.3■■□□□ 1.96
SMAD1-214ENST00000514831 FBXO40Q9UH90 709 aa27.3■■□□□ 1.96
SMAD1-214ENST00000514831 CTDP1Q9Y5B0 961 aaPredicted RBP27.3■■□□□ 1.96
SMAD1-214ENST00000514831 SPTBN5Q9NRC6 3674 aaKnown RBP27.29■■□□□ 1.96
SMAD1-214ENST00000514831 C6orf222P0C671 652 aaPredicted RBP27.29■■□□□ 1.96
SMAD1-214ENST00000514831 OAZ1P54368 228 aa27.29■■□□□ 1.96
SMAD1-214ENST00000514831 MKL1Q969V6 931 aa27.29■■□□□ 1.96
SMAD1-214ENST00000514831 KIFC2Q96AC6 838 aa27.29■■□□□ 1.96
SMAD1-214ENST00000514831 RAVER2Q9HCJ3 691 aaKnown RBP27.29■■□□□ 1.96
SMAD1-214ENST00000514831 FEM1BQ9UK73 627 aa27.29■■□□□ 1.96
SMAD1-214ENST00000514831 PLIN4Q96Q06 1357 aa27.29■■□□□ 1.96
SMAD1-214ENST00000514831 LRRC37A2A6NM11 1700 aa27.29■■□□□ 1.96
SMAD1-214ENST00000514831 CDK7P50613 346 aa27.28■■□□□ 1.96
SMAD1-214ENST00000514831 GJA9P57773 515 aa27.28■■□□□ 1.96
SMAD1-214ENST00000514831 GRIN2CQ14957 1233 aa27.28■■□□□ 1.96
SMAD1-214ENST00000514831 MFSD5Q6N075 450 aa27.28■■□□□ 1.96
SMAD1-214ENST00000514831 ANKRD35Q8N283 1001 aa27.28■■□□□ 1.96
SMAD1-214ENST00000514831 CHST13Q8NET6 341 aa27.28■■□□□ 1.96
SMAD1-214ENST00000514831 CEP95Q96GE4 821 aa27.28■■□□□ 1.96
SMAD1-214ENST00000514831 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.28■■□□□ 1.96
SMAD1-214ENST00000514831 SPC25Q9HBM1 224 aa27.28■■□□□ 1.96
SMAD1-214ENST00000514831 ZNF287Q9HBT7 754 aa27.28■■□□□ 1.96
SMAD1-214ENST00000514831 GPAA1O43292 621 aa27.27■■□□□ 1.96
SMAD1-214ENST00000514831 ASGR1P07306 291 aa27.27■■□□□ 1.96
SMAD1-214ENST00000514831 SLC4A3P48751 1232 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms