RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 ACER1Q8TDN7 264 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 KCTD12Q96CX2 325 aaKnown RBP8.33□□□□□ -1.08
SMAD1-213ENST00000514778 NEK1Q96PY6 1258 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 ZIC5Q96T25 663 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 PARK7Q99497 189 aaKnown RBP8.33□□□□□ -1.08
SMAD1-213ENST00000514778 MAP3K14Q99558 947 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 ZFYVE28Q9HCC9 887 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 INCENPQ9NQS7 918 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 HOXC10Q9NYD6 342 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 CLIP2Q9UDT6 1046 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 STX8Q9UNK0 236 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 PHIPQ8WWQ0 1821 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 ATAD5Q96QE3 1844 aa8.33□□□□□ -1.08
SMAD1-213ENST00000514778 PPP1R3GB7ZBB8 358 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 TLR2O60603 784 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 VCAM1P19320 739 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 COG2Q14746 738 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 SEC23AQ15436 765 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 GADL1Q6ZQY3 521 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 CATSPERGQ6ZRH7 1159 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 STOX1Q6ZVD7 989 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 DHX32Q7L7V1 743 aaKnown RBP8.32□□□□□ -1.08
SMAD1-213ENST00000514778 FAM43AQ8N2R8 423 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 DCAF4Q8WV16 495 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 TMEM47Q9BQJ4 181 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 UPF2Q9HAU5 1272 aaKnown RBP8.32□□□□□ -1.08
SMAD1-213ENST00000514778 RNF186Q9NXI6 227 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.32□□□□□ -1.08
SMAD1-213ENST00000514778 SNX14Q9Y5W7 946 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 LOC285556D6RIA3 1793 aa8.32□□□□□ -1.08
SMAD1-213ENST00000514778 TNKSO95271 1327 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 DPYSL4O14531 572 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 IFIT3O14879 490 aaKnown RBP8.31□□□□□ -1.08
SMAD1-213ENST00000514778 NDUFB10O96000 172 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 SNHG28P0DPA3 235 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 BMP3P12645 472 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 RCAN1P53805 252 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 IRX3P78415 501 aaPredicted RBP8.31□□□□□ -1.08
SMAD1-213ENST00000514778 EXOSC10Q01780 885 aaKnown RBP8.31□□□□□ -1.08
SMAD1-213ENST00000514778 ATP2B2Q01814 1243 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 WTAPQ15007 396 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 TAF1CQ15572 869 aaPredicted RBP8.31□□□□□ -1.08
SMAD1-213ENST00000514778 TREML2Q5T2D2 321 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 GPATCH4Q5T3I0 446 aaKnown RBP8.31□□□□□ -1.08
SMAD1-213ENST00000514778 IFIT1BQ5T764 474 aaKnown RBP8.31□□□□□ -1.08
SMAD1-213ENST00000514778 SLFN13Q68D06 897 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 CCDC84Q86UT8 332 aaPredicted RBP8.31□□□□□ -1.08
SMAD1-213ENST00000514778 FAM160B2Q86V87 743 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 MB21D1Q8N884 522 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 ENAHQ8N8S7 591 aaPredicted RBP8.31□□□□□ -1.08
SMAD1-213ENST00000514778 PRPF38AQ8NAV1 312 aaKnown RBP8.31□□□□□ -1.08
SMAD1-213ENST00000514778 IGDCC4Q8TDY8 1250 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 KAT14Q9H8E8 782 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 FEM1BQ9UK73 627 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 PNMA2Q9UL42 364 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 TAF6LQ9Y6J9 622 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 MYH8P13535 1937 aa8.31□□□□□ -1.08
SMAD1-213ENST00000514778 PRC1O43663 620 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 NMT2O60551 498 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 TRPA1O75762 1119 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 GNRH1P01148 92 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 CALM1P0DP23 149 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 CALM2P0DP24 149 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 CALM3P0DP25 149 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 SLC1A4P43007 532 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 CTCFP49711 727 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-213ENST00000514778 RBM25P49756 843 aaKnown RBP8.3□□□□□ -1.08
SMAD1-213ENST00000514778 ANTXR2P58335 489 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 CRHR2Q13324 411 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 ARHGEF6Q15052 776 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 PPP2R5BQ15173 497 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 TMEM67Q5HYA8 995 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 BLOC1S2Q6QNY1 142 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 C17orf99Q6UX52 265 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 BTNL9Q6UXG8 535 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 RUFY3Q7L099 469 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 CYB5R4Q7L1T6 521 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 CATIPQ7Z7H3 387 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 SGMS1Q86VZ5 419 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 PNMA1Q8ND90 353 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 SMCR8Q8TEV9 937 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-213ENST00000514778 CHURC1Q8WUH1 139 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 EPAS1Q99814 870 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 AGXT2Q9BYV1 514 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 ASCC2Q9H1I8 757 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-213ENST00000514778 ALDH8A1Q9H2A2 487 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-213ENST00000514778 RPAP3Q9H6T3 665 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-213ENST00000514778 PLA2G2EQ9NZK7 142 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 MORF4L1Q9UBU8 362 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 ADAMTS5Q9UNA0 930 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 CYP46A1Q9Y6A2 500 aa8.3□□□□□ -1.08
SMAD1-213ENST00000514778 ADGRA2Q96PE1 1338 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 SH2B2O14492 632 aaPredicted RBP8.29□□□□□ -1.08
SMAD1-213ENST00000514778 ATP2A1O14983 1001 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 DDAH1O94760 285 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 PDHBP11177 359 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 RPS6KB1P23443 525 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 SMARCA1P28370 1054 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 COPB2P35606 906 aa8.29□□□□□ -1.08
SMAD1-213ENST00000514778 STAT2P52630 851 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms