RNA–Protein interactions for RNA: ENST00000514534.1

DDR1-276, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-276ENST00000514534 GOPCQ9HD26 462 aa12.3□□□□□ -0.44
DDR1-276ENST00000514534 PPP1R9AQ9ULJ8 1098 aa12.3□□□□□ -0.44
DDR1-276ENST00000514534 BAZ2AQ9UIF9 1905 aaKnown RBP12.3□□□□□ -0.44
DDR1-276ENST00000514534 A0A0U1RQG5 324 aaPredicted RBP12.29□□□□□ -0.44
DDR1-276ENST00000514534 VWA5AO00534 786 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 AKR1B1P15121 316 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 CSF2RAP15509 400 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 PDE6AP16499 860 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 CDK7P50613 346 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 ZKSCAN2Q63HK3 967 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 CCSAPQ6IQ19 270 aaPredicted RBP12.29□□□□□ -0.44
DDR1-276ENST00000514534 MAMDC4Q6UXC1 1216 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 ZNF365Q70YC5 407 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 SIAH1Q8IUQ4 282 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 LENG1Q96BZ8 264 aaPredicted RBP12.29□□□□□ -0.44
DDR1-276ENST00000514534 DDX11Q96FC9 970 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 C1QTNF1Q9BXJ1 281 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 KANSL2Q9H9L4 492 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 SLC28A3Q9HAS3 691 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 ATP8A2Q9NTI2 1148 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 RAPGEFL1Q9UHV5 662 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 ZHX1Q9UKY1 873 aaPredicted RBP12.29□□□□□ -0.44
DDR1-276ENST00000514534 ZNF214Q9UL59 606 aaPredicted RBP12.29□□□□□ -0.44
DDR1-276ENST00000514534 TNNQ9UQP3 1299 aa12.29□□□□□ -0.44
DDR1-276ENST00000514534 TCF20Q9UGU0 1960 aaKnown RBP12.29□□□□□ -0.44
DDR1-276ENST00000514534 GRXCR1A8MXD5 290 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 ARVCFO00192 962 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 ASGR1P07306 291 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 C6orf222P0C671 652 aaPredicted RBP12.28□□□□□ -0.44
DDR1-276ENST00000514534 EEF2P13639 858 aaKnown RBP12.28□□□□□ -0.44
DDR1-276ENST00000514534 EVX2Q03828 476 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 CCDC85BQ15834 202 aaPredicted RBP12.28□□□□□ -0.44
DDR1-276ENST00000514534 AAK1Q2M2I8 961 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 C16orf59Q7L2K0 433 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 ZNF467Q7Z7K2 595 aaPredicted RBP12.28□□□□□ -0.44
DDR1-276ENST00000514534 AACSQ86V21 672 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 CLEC10AQ8IUN9 316 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 HERVK_113Q902F9 699 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 DYNLL2Q96FJ2 89 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 C1orf115Q9H7X2 142 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 IL23AQ9NPF7 189 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 FBXO28Q9NVF7 368 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 MCM3APO60318 1980 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 ZNF532Q9HCE3 1301 aa12.28□□□□□ -0.44
DDR1-276ENST00000514534 RAD21O60216 631 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 SNAI1O95863 264 aaPredicted RBP12.27□□□□□ -0.45
DDR1-276ENST00000514534 ACRP10323 421 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 CYP2D6P10635 497 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 CDK8P49336 464 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 ADGRE1Q14246 886 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 FAM126BQ8IXS8 530 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 LCORLQ8N3X6 602 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 REPS2Q8NFH8 660 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.27□□□□□ -0.45
DDR1-276ENST00000514534 DDRGK1Q96HY6 314 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 TEX13BQ9BXU2 312 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 PPP1R12CQ9BZL4 782 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 ABHD16BQ9H3Z7 469 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
DDR1-276ENST00000514534 CXXC1Q9P0U4 656 aaPredicted RBP12.27□□□□□ -0.45
DDR1-276ENST00000514534 MYADML2A6NDP7 307 aa12.26□□□□□ -0.45
DDR1-276ENST00000514534 FGBP02675 491 aa12.26□□□□□ -0.45
DDR1-276ENST00000514534 GJA9P57773 515 aa12.26□□□□□ -0.45
DDR1-276ENST00000514534 ACVR2BQ13705 512 aa12.26□□□□□ -0.45
DDR1-276ENST00000514534 HSP90AB4PQ58FF6 505 aa12.26□□□□□ -0.45
DDR1-276ENST00000514534 FAM83BQ5T0W9 1011 aa12.26□□□□□ -0.45
DDR1-276ENST00000514534 SNRNP48Q6IEG0 339 aaKnown RBP12.26□□□□□ -0.45
DDR1-276ENST00000514534 FTSJ3Q8IY81 847 aaKnown RBP12.26□□□□□ -0.45
DDR1-276ENST00000514534 SLF1Q9BQI6 1058 aa12.26□□□□□ -0.45
DDR1-276ENST00000514534 SEZ6LQ9BYH1 1024 aa12.26□□□□□ -0.45
DDR1-276ENST00000514534 UPF3AQ9H1J1 476 aaKnown RBP12.26□□□□□ -0.45
DDR1-276ENST00000514534 NKX2-4Q9H2Z4 354 aa12.26□□□□□ -0.45
DDR1-276ENST00000514534 CTDP1Q9Y5B0 961 aaPredicted RBP12.26□□□□□ -0.45
DDR1-276ENST00000514534 MYH7P12883 1935 aa12.25□□□□□ -0.45
DDR1-276ENST00000514534 MUC3AQ02505 3323 aa12.25□□□□□ -0.45
DDR1-276ENST00000514534 DNAJC25-GNG10A0A024R161 153 aa12.25□□□□□ -0.45
DDR1-276ENST00000514534 GNASQ5JWF2 1037 aa12.25□□□□□ -0.45
DDR1-276ENST00000514534 C12orf60Q5U649 245 aa12.25□□□□□ -0.45
DDR1-276ENST00000514534 C16orf86Q6ZW13 317 aa12.25□□□□□ -0.45
DDR1-276ENST00000514534 DNAJC2Q99543 621 aaKnown RBP12.25□□□□□ -0.45
DDR1-276ENST00000514534 ARMT1Q9H993 441 aa12.25□□□□□ -0.45
DDR1-276ENST00000514534 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.25□□□□□ -0.45
DDR1-276ENST00000514534 ARIH1Q9Y4X5 557 aaPredicted RBP12.25□□□□□ -0.45
DDR1-276ENST00000514534 TCRBV5S4A2TA0A5A2 114 aa12.24□□□□□ -0.45
DDR1-276ENST00000514534 GOLIM4O00461 696 aa12.24□□□□□ -0.45
DDR1-276ENST00000514534 ATP2A1O14983 1001 aa12.24□□□□□ -0.45
DDR1-276ENST00000514534 ZBED4O75132 1171 aa12.24□□□□□ -0.45
DDR1-276ENST00000514534 CABYRO75952 493 aa12.24□□□□□ -0.45
DDR1-276ENST00000514534 CD4P01730 458 aa12.24□□□□□ -0.45
DDR1-276ENST00000514534 CYP2C18P33260 490 aa12.24□□□□□ -0.45
DDR1-276ENST00000514534 CCDC144BQ3MJ40 725 aa12.24□□□□□ -0.45
DDR1-276ENST00000514534 PPP2R2DQ66LE6 453 aa12.24□□□□□ -0.45
DDR1-276ENST00000514534 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDR1-276ENST00000514534 ITPRIPQ8IWB1 547 aa12.24□□□□□ -0.45
DDR1-276ENST00000514534 RPUSD2Q8IZ73 545 aaKnown RBP12.24□□□□□ -0.45
DDR1-276ENST00000514534 ANKRD35Q8N283 1001 aa12.24□□□□□ -0.45
DDR1-276ENST00000514534 PRPF38AQ8NAV1 312 aaKnown RBP12.24□□□□□ -0.45
DDR1-276ENST00000514534 GREB1LQ9C091 1923 aaPredicted RBP12.24□□□□□ -0.45
DDR1-276ENST00000514534 HIPK3Q9H422 1215 aa12.24□□□□□ -0.45
DDR1-276ENST00000514534 FBXO40Q9UH90 709 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms