RNA–Protein interactions for RNA: ENST00000514455.5

RACK1-233, Transcript of receptor for activated C kinase 1, human

TSL 2 BASIC

Gene RACK1, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-233	ENST00000514455	STAG2	Q8N3U4	1231 aa		11.53	□□□□□ -0.56
RACK1-233	ENST00000514455	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.53	□□□□□ -0.56
RACK1-233	ENST00000514455	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.53	□□□□□ -0.56
RACK1-233	ENST00000514455	ZNF274	Q96GC6	653 aa	Predicted RBP	11.53	□□□□□ -0.56
RACK1-233	ENST00000514455	SLF1	Q9BQI6	1058 aa		11.53	□□□□□ -0.56
RACK1-233	ENST00000514455	LARP6	Q9BRS8	491 aa	Known RBP	11.53	□□□□□ -0.56
RACK1-233	ENST00000514455	MAD2L2	Q9UI95	211 aa		11.53	□□□□□ -0.56
RACK1-233	ENST00000514455	PPP1R9A	Q9ULJ8	1098 aa		11.53	□□□□□ -0.56
RACK1-233	ENST00000514455	MYPN	Q86TC9	1320 aa		11.53	□□□□□ -0.56
RACK1-233	ENST00000514455	KLRF2	D3W0D1	207 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	ST18	O60284	1047 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	TLR2	O60603	784 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	FDX1	P10109	184 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	RXRA	P19793	462 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	PDIA3	P30101	505 aa	Known RBP	11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	SLC16A2	P36021	539 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	GCLC	P48506	637 aa	Predicted RBP	11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	RCAN1	P53805	252 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	HERVK_113	P62684	666 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	PPP2R5B	Q15173	497 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	MICU3	Q86XE3	530 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	RAB11FIP4	Q86YS3	637 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	CCDC144CP	Q8IYA2	1237 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	KIFC2	Q96AC6	838 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	ATG4C	Q96DT6	458 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	CFHR5	Q9BXR6	569 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	UBA5	Q9GZZ9	404 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	R3HDML	Q9H3Y0	253 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	SAGE1	Q9NXZ1	904 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	ADAMTS5	Q9UNA0	930 aa		11.52	□□□□□ -0.57
RACK1-233	ENST00000514455	LOC285556	D6RIA3	1793 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	CCDC196	A0A1B0GTZ2	297 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	GOLGA8A	A7E2F4	631 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	GOLGA8B	A8MQT2	603 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	VWA5A	O00534	786 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	ZBED4	O75132	1171 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	METAP2	P50579	478 aa	Known RBP eCLIP	11.51	□□□□□ -0.57	2e-20	■■■■□ 20.1
RACK1-233	ENST00000514455	RTN1	Q16799	776 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	SYDE2	Q5VT97	1194 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	C17orf99	Q6UX52	265 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	LBX2	Q6XYB7	198 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	ANKRD13C	Q8N6S4	541 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	MB21D1	Q8N884	522 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	LZTS2	Q9BRK4	669 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	VAT1L	Q9HCJ6	419 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	RBM28	Q9NW13	759 aa	Known RBP	11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	RBPJL	Q9UBG7	517 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	CPA4	Q9UI42	421 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	PRR12	Q9ULL5	1215 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	TPCN1	Q9ULQ1	816 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	RABGAP1	Q9Y3P9	1069 aa		11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.51	□□□□□ -0.57
RACK1-233	ENST00000514455	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	DHX16	O60231	1041 aa	Known RBP	11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	SMARCA1	P28370	1054 aa		11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	ADD1	P35611	737 aa	Known RBP	11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	CCT2	P78371	535 aa	Known RBP	11.5	□□□□□ -0.57
RACK1-233	ENST00000514455		Q3C1V9	767 aa		11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	NOL8	Q76FK4	1167 aa	Known RBP	11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	ADGRF4	Q8IZF3	695 aa		11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	PIP4P2	Q8N4L2	257 aa		11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	GPRC5A	Q8NFJ5	357 aa		11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	PAGR1	Q9BTK6	254 aa		11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	SLK	Q9H2G2	1235 aa	Predicted RBP	11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	CPVL	Q9H3G5	476 aa		11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	RIOX1	Q9H6W3	641 aa		11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	LIMCH1	Q9UPQ0	1083 aa		11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	HPS5	Q9UPZ3	1129 aa		11.5	□□□□□ -0.57
RACK1-233	ENST00000514455	BCR	P11274	1271 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	CDC27	P30260	824 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	STAT3	P40763	770 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	STK3	Q13188	491 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	POTEE	Q6S8J3	1075 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	NBPF11	Q86T75	865 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	CPXCR1	Q8N123	301 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	CCDC82	Q8N4S0	544 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	SRBD1	Q8N5C6	995 aa	Known RBP	11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	SLC38A10	Q9HBR0	1119 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	TXNRD2	Q9NNW7	524 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	BTBD7	Q9P203	1132 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	MORF4L1	Q9UBU8	362 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	ADGRA2	Q96PE1	1338 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	THSD7B	Q9C0I4	1608 aa		11.49	□□□□□ -0.57
RACK1-233	ENST00000514455	GPR25	O00155	361 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	ATP2A1	O14983	1001 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	PEX10	O60683	326 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	PFKFB2	O60825	505 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	CNMD	O75829	334 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	PLEKHA8P1	O95397	391 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	MCM2	P49736	904 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	SNAP25	P60880	206 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	ERVK-9	P63128	1117 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	ERVK-24	P63145	666 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	CCNA1	P78396	465 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	SP3	Q02447	781 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	PLS1	Q14651	629 aa		11.48	□□□□□ -0.57
RACK1-233	ENST00000514455	TMEM132B	Q14DG7	1078 aa		11.48	□□□□□ -0.57

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