RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 RNF168Q8IYW5 571 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-208ENST00000514335 KRI1Q8N9T8 703 aaKnown RBP8.1□□□□□ -1.11
NIPBL-208ENST00000514335 NUP133Q8WUM0 1156 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 JPH3Q8WXH2 748 aaPredicted RBP8.1□□□□□ -1.11
NIPBL-208ENST00000514335 TAGLN3Q9UI15 199 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.1□□□□□ -1.112e-9■■■■■ 40
NIPBL-208ENST00000514335 CLTCL1P53675 1640 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 TOPAZ1Q8N9V7 1692 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 CAMTA1Q9Y6Y1 1673 aa8.1□□□□□ -1.11
NIPBL-208ENST00000514335 NDUFAB1O14561 156 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 FDX1P10109 184 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 RASA1P20936 1047 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 HMGB2P26583 209 aaKnown RBP8.09□□□□□ -1.11
NIPBL-208ENST00000514335 HNRNPH1P31943 449 aaKnown RBP8.09□□□□□ -1.11
NIPBL-208ENST00000514335 CORO7P57737 925 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 KCNB1Q14721 858 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 BRD3Q15059 726 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 PROSER3Q2NL68 480 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 PPP4R4Q6NUP7 873 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 ARHGEF18Q6ZSZ5 1173 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 GCC1Q96CN9 775 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 TSPY26PQ9H489 355 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 CARD8Q9Y2G2 431 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 PRPF40AO75400 957 aaKnown RBP8.09□□□□□ -1.11
NIPBL-208ENST00000514335 GFPT2O94808 682 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 GNRH1P01148 92 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 KRT10P13645 584 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 USP8P40818 1118 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 CCT8P50990 548 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 GBE1Q04446 702 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 PPIDQ08752 370 aaKnown RBP8.09□□□□□ -1.11
NIPBL-208ENST00000514335 IMMTQ16891 758 aaKnown RBP8.09□□□□□ -1.11
NIPBL-208ENST00000514335 TMEM95Q3KNT9 176 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 ZC3H12BQ5HYM0 836 aaKnown RBP8.09□□□□□ -1.11
NIPBL-208ENST00000514335 NPLOC4Q8TAT6 608 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 EPS8L3Q8TE67 593 aaKnown RBP8.09□□□□□ -1.11
NIPBL-208ENST00000514335 MRPL46Q9H2W6 279 aaKnown RBP8.09□□□□□ -1.11
NIPBL-208ENST00000514335 DDX21Q9NR30 783 aaKnown RBP eCLIP8.09□□□□□ -1.11
NIPBL-208ENST00000514335 SLAIN2Q9P270 581 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 ZC3H7BQ9UGR2 993 aaKnown RBP8.09□□□□□ -1.11
NIPBL-208ENST00000514335 TRIM17Q9Y577 477 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 QRICH2Q9H0J4 1663 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 AATKQ6ZMQ8 1374 aa8.09□□□□□ -1.11
NIPBL-208ENST00000514335 C1orf167Q5SNV9 1468 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 TEX28O15482 410 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 PPP1R12BO60237 982 aaPredicted RBP8.09□□□□□ -1.12
NIPBL-208ENST00000514335 ABCB7O75027 752 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 GPTP24298 496 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 STAT3P40763 770 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 VWA3BQ502W6 1294 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 RNF187Q5TA31 235 aaPredicted RBP8.09□□□□□ -1.12
NIPBL-208ENST00000514335 PLBD1Q6P4A8 553 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 CATSPER4Q7RTX7 472 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 TTC39CQ8N584 583 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 KCT2Q8NC54 265 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 BRSK1Q8TDC3 778 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 LRRC45Q96CN5 670 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 CLMNQ96JQ2 1002 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 APBA2Q99767 749 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 VCPKMTQ9H867 229 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 ARNT2Q9HBZ2 717 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 HOMER3Q9NSC5 361 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 PRKAB1Q9Y478 270 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 BRWD3Q6RI45 1802 aa8.09□□□□□ -1.12
NIPBL-208ENST00000514335 PEAK1Q9H792 1746 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 A0A1B0GUA9 196 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 ATP8B1O43520 1251 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 RHOBTB3O94955 611 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 TMOD1P28289 359 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 RXRBP28702 533 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 STT3AP46977 705 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 MASP1P48740 699 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 AP2B1P63010 937 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 BOLA3Q53S33 107 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 TNNI3KQ59H18 835 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 WDR44Q5JSH3 913 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 POTEAQ6S8J7 498 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 PALB2Q86YC2 1186 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 ERC1Q8IUD2 1116 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 FAM9CQ8IZT9 166 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 CCDC150Q8NCX0 1101 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 SCG3Q8WXD2 468 aaKnown RBP8.08□□□□□ -1.12
NIPBL-208ENST00000514335 SPOCK2Q92563 424 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 SPDL1Q96EA4 605 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 GPR101Q96P66 508 aaPredicted RBP8.08□□□□□ -1.12
NIPBL-208ENST00000514335 OXCT2Q9BYC2 517 aaPredicted RBP8.08□□□□□ -1.12
NIPBL-208ENST00000514335 ARPC4-TTLL3A0A0A6YYG9 625 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 CCDC163A0A0D9SF12 145 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 PER1O15534 1290 aaPredicted RBP8.08□□□□□ -1.12
NIPBL-208ENST00000514335 ZEB2O60315 1214 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 NMT2O60551 498 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 SEPHS1P49903 392 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 DGLUCYQ7Z3D6 616 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 OR8H2Q8N162 312 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 TEX19Q8NA77 164 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 USP38Q8NB14 1042 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 GALNT6Q8NCL4 622 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 KAT2BQ92831 832 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 GLMNQ92990 594 aa8.08□□□□□ -1.12
NIPBL-208ENST00000514335 SMARCE1Q969G3 411 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms