RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 FILIP1Q7Z7B0 1213 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 DZIP1Q86YF9 867 aaKnown RBP8.43□□□□□ -1.06
CLIP1-205ENST00000514271 REM2Q8IYK8 340 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-205ENST00000514271 STK11IPQ8N1F8 1099 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 ATRIPQ8WXE1 791 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 MRPS27Q92552 414 aaKnown RBP8.43□□□□□ -1.06
CLIP1-205ENST00000514271 BRMS1Q9HCU9 246 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 ARHGAP6O43182 974 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 TOB1P50616 345 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-205ENST00000514271 FANCCQ00597 558 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 ARHGAP29Q52LW3 1261 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 KBTBD3Q8NAB2 608 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 ZNF784Q8NCA9 323 aaPredicted RBP8.43□□□□□ -1.06
CLIP1-205ENST00000514271 DCPSQ96C86 337 aaKnown RBP8.43□□□□□ -1.06
CLIP1-205ENST00000514271 TTYH3Q9C0H2 523 aa8.43□□□□□ -1.06
CLIP1-205ENST00000514271 E7EWF7 191 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 ACTN4O43707 911 aaKnown RBP8.42□□□□□ -1.06
CLIP1-205ENST00000514271 ZEB2O60315 1214 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 DDNO94850 711 aaPredicted RBP8.42□□□□□ -1.06
CLIP1-205ENST00000514271 GNAT2P19087 354 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 TNFRSF8P28908 595 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 NF2P35240 595 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 TIMM10P62072 90 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 SMC1AQ14683 1233 aaKnown RBP8.42□□□□□ -1.06
CLIP1-205ENST00000514271 TXNRD3Q86VQ6 643 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 C1orf131Q8NDD1 294 aaKnown RBP8.42□□□□□ -1.06
CLIP1-205ENST00000514271 TNFRSF25Q93038 417 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 ZNFX1Q9P2E3 1918 aaKnown RBP8.42□□□□□ -1.06
CLIP1-205ENST00000514271 SPDYE2BA6NHP3 402 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 KIF3CO14782 793 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 TRIM66O15016 1216 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 SPDYE6P0CI01 402 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 OAS2P29728 719 aaKnown RBP8.42□□□□□ -1.06
CLIP1-205ENST00000514271 ADORA1P30542 326 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 CASQ1P31415 396 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 SPDYE2Q495Y8 402 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 RINLQ6ZS11 566 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 BRAPQ7Z569 592 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 ZNF579Q8NAF0 562 aaKnown RBP8.42□□□□□ -1.06
CLIP1-205ENST00000514271 KAT2BQ92831 832 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 ZCCHC17Q9NP64 241 aaKnown RBP8.42□□□□□ -1.06
CLIP1-205ENST00000514271 TTF2Q9UNY4 1162 aaKnown RBP8.42□□□□□ -1.06
CLIP1-205ENST00000514271 NAV1Q8NEY1 1877 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 GPR75-ASB3A0A0A6YYF3 556 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 RASSF10A6NK89 507 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 PFKFB1P16118 471 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 MCAMP43121 646 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 MAGEA9P43362 315 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 CRKP46108 304 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 FMR1Q06787 632 aaKnown RBP eCLIP8.42□□□□□ -1.06
CLIP1-205ENST00000514271 MYSM1Q5VVJ2 828 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 IDI2Q9BXS1 227 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 PAG1Q9NWQ8 432 aa8.42□□□□□ -1.06
CLIP1-205ENST00000514271 THSD7BQ9C0I4 1608 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 TCRBV5S4A2TA0A5A2 114 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 EPB41P11171 864 aaKnown RBP8.41□□□□□ -1.06
CLIP1-205ENST00000514271 KLRK1P26718 216 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 TUBB2AQ13885 445 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 LONRF2Q1L5Z9 754 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 MCMDC2Q4G0Z9 681 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 TRAPPC11Q7Z392 1133 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 FERMT3Q86UX7 667 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 NEK11Q8NG66 645 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 ENOX1Q8TC92 643 aaKnown RBP8.41□□□□□ -1.06
CLIP1-205ENST00000514271 TUBB2BQ9BVA1 445 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 LRP2BPQ9P2M1 347 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLIP1-205ENST00000514271 SH3BP1Q9Y3L3 701 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 ADGRG1Q9Y653 693 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 ZNF202O95125 648 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 HSPD1P10809 573 aaKnown RBP8.41□□□□□ -1.06
CLIP1-205ENST00000514271 ITIH3Q06033 890 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 NPY5RQ15761 445 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 SUPT20HL1Q3ZLR7 823 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 CFAP100Q494V2 611 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 RAD9BQ6WBX8 426 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 RUBCNQ92622 972 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 DDX11Q96FC9 970 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 RRAGCQ9HB90 399 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 IFNKQ9P0W0 207 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 LRRIQ3A6PVS8 624 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-205ENST00000514271 ABL1P00519 1130 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 SULF1Q8IWU6 871 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 KCNG4Q8TDN1 519 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 EPC1Q9H2F5 836 aa8.41□□□□□ -1.06
CLIP1-205ENST00000514271 DHX36Q9H2U1 1008 aaKnown RBP8.41□□□□□ -1.06
CLIP1-205ENST00000514271 FBXO2Q9UK22 296 aaPredicted RBP8.41□□□□□ -1.06
CLIP1-205ENST00000514271 ATRNL1Q5VV63 1379 aa8.4□□□□□ -1.06
CLIP1-205ENST00000514271 POTECB2RU33 542 aa8.4□□□□□ -1.06
CLIP1-205ENST00000514271 ZSCAN26Q16670 478 aa8.4□□□□□ -1.06
CLIP1-205ENST00000514271 DCAF15Q66K64 600 aa8.4□□□□□ -1.06
CLIP1-205ENST00000514271 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.4□□□□□ -1.06
CLIP1-205ENST00000514271 ZNF771Q7L3S4 317 aaPredicted RBP8.4□□□□□ -1.06
CLIP1-205ENST00000514271 SRGAP1Q7Z6B7 1085 aa8.4□□□□□ -1.06
CLIP1-205ENST00000514271 CCDC8Q9H0W5 538 aaPredicted RBP8.4□□□□□ -1.06
CLIP1-205ENST00000514271 WDR70Q9NW82 654 aa8.4□□□□□ -1.06
CLIP1-205ENST00000514271 BAZ2AQ9UIF9 1905 aaKnown RBP8.4□□□□□ -1.06
CLIP1-205ENST00000514271 M0R2C6 588 aa8.4□□□□□ -1.06
CLIP1-205ENST00000514271 RANBP6O60518 1105 aaKnown RBP8.4□□□□□ -1.06
CLIP1-205ENST00000514271 LCA5LO95447 670 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms