RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 FAM160B2Q86V87 743 aa18.46■□□□□ 0.55
TRIM41-206ENST00000514219 NECAB1Q8N987 351 aa18.46■□□□□ 0.55
TRIM41-206ENST00000514219 CCDC12Q8WUD4 166 aaPredicted RBP18.46■□□□□ 0.55
TRIM41-206ENST00000514219 LARP6Q9BRS8 491 aaKnown RBP18.46■□□□□ 0.55
TRIM41-206ENST00000514219 MYL10Q9BUA6 226 aa18.46■□□□□ 0.55
TRIM41-206ENST00000514219 OTOFQ9HC10 1997 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 PALM3A6NDB9 673 aaPredicted RBP18.45■□□□□ 0.54
TRIM41-206ENST00000514219 SPDYE5A6NIY4 337 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 KLRF2D3W0D1 207 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 PLA2G6O60733 806 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 LARGE1O95461 756 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 FMNL1O95466 1100 aaPredicted RBP18.45■□□□□ 0.54
TRIM41-206ENST00000514219 ZBTB48P10074 688 aaPredicted RBP18.45■□□□□ 0.54
TRIM41-206ENST00000514219 BMP3P12645 472 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 STAT2P52630 851 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 IKQ13123 557 aaPredicted RBP18.45■□□□□ 0.54
TRIM41-206ENST00000514219 PABPC4Q13310 644 aaKnown RBP eCLIP18.45■□□□□ 0.54
TRIM41-206ENST00000514219 TEX2Q8IWB9 1127 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 NSUN7Q8NE18 718 aaKnown RBP18.45■□□□□ 0.54
TRIM41-206ENST00000514219 SMARCC2Q8TAQ2 1214 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 ZKSCAN4Q969J2 545 aaPredicted RBP18.45■□□□□ 0.54
TRIM41-206ENST00000514219 RRP36Q96EU6 259 aaKnown RBP18.45■□□□□ 0.54
TRIM41-206ENST00000514219 TMEM106CQ9BVX2 250 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 EFCC1Q9HA90 598 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 SENP2Q9HC62 589 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 NCOA5Q9HCD5 579 aaKnown RBP18.45■□□□□ 0.54
TRIM41-206ENST00000514219 FZD1Q9UP38 647 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 ATP6V1DQ9Y5K8 247 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 ZHX2Q9Y6X8 837 aa18.45■□□□□ 0.54
TRIM41-206ENST00000514219 DLL1O00548 723 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 CXCL11O14625 94 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 GJB2P29033 226 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 PPIL2Q13356 520 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.44■□□□□ 0.54
TRIM41-206ENST00000514219 CCDC144CPQ8IYA2 1237 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 NKX2-3Q8TAU0 364 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 SLC10A4Q96EP9 437 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 OTUD5Q96G74 571 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 WNK4Q96J92 1243 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 C12orf42Q96LP6 360 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 ORC3Q9UBD5 711 aaPredicted RBP18.44■□□□□ 0.54
TRIM41-206ENST00000514219 MAD2L2Q9UI95 211 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 FEM1BQ9UK73 627 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 SNCAIPQ9Y6H5 919 aa18.44■□□□□ 0.54
TRIM41-206ENST00000514219 H0YGN5 161 aa18.43■□□□□ 0.54
TRIM41-206ENST00000514219 PRPF3O43395 683 aaKnown RBP18.43■□□□□ 0.54
TRIM41-206ENST00000514219 NDUFB10O96000 172 aa18.43■□□□□ 0.54
TRIM41-206ENST00000514219 RXRAP19793 462 aa18.43■□□□□ 0.54
TRIM41-206ENST00000514219 CRHR2Q13324 411 aa18.43■□□□□ 0.54
TRIM41-206ENST00000514219 RRP1BQ14684 758 aaKnown RBP18.43■□□□□ 0.54
TRIM41-206ENST00000514219 FASTKD5Q7L8L6 764 aaKnown RBP18.43■□□□□ 0.54
TRIM41-206ENST00000514219 CCDC148Q8NFR7 591 aa18.43■□□□□ 0.54
TRIM41-206ENST00000514219 ZNF333Q96JL9 665 aa18.43■□□□□ 0.54
TRIM41-206ENST00000514219 BRMS1Q9HCU9 246 aa18.43■□□□□ 0.54
TRIM41-206ENST00000514219 CHMP5Q9NZZ3 219 aa18.43■□□□□ 0.54
TRIM41-206ENST00000514219 LAMA3Q16787 3333 aa18.43■□□□□ 0.54
TRIM41-206ENST00000514219 H3BQV1 296 aa18.42■□□□□ 0.54
TRIM41-206ENST00000514219 ADD1P35611 737 aaKnown RBP18.42■□□□□ 0.54
TRIM41-206ENST00000514219 CAP1Q01518 475 aa18.42■□□□□ 0.54
TRIM41-206ENST00000514219 SPP2Q13103 211 aa18.42■□□□□ 0.54
TRIM41-206ENST00000514219 MTMR2Q13614 643 aa18.42■□□□□ 0.54
TRIM41-206ENST00000514219 SAFBQ15424 915 aaKnown RBP eCLIP18.42■□□□□ 0.54
TRIM41-206ENST00000514219 PROCA1Q8NCQ7 364 aaPredicted RBP18.42■□□□□ 0.54
TRIM41-206ENST00000514219 CLMNQ96JQ2 1002 aa18.42■□□□□ 0.54
TRIM41-206ENST00000514219 SLC26A6Q9BXS9 759 aa18.42■□□□□ 0.54
TRIM41-206ENST00000514219 GLT8D2Q9H1C3 349 aa18.42■□□□□ 0.54
TRIM41-206ENST00000514219 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.42■□□□□ 0.54
TRIM41-206ENST00000514219 MTMR7Q9Y216 660 aa18.42■□□□□ 0.54
TRIM41-206ENST00000514219 CUL9Q8IWT3 2517 aa18.42■□□□□ 0.54
TRIM41-206ENST00000514219 CDC27P30260 824 aa18.41■□□□□ 0.54
TRIM41-206ENST00000514219 SP3Q02447 781 aa18.41■□□□□ 0.54
TRIM41-206ENST00000514219 SNAPC2Q13487 334 aa18.41■□□□□ 0.54
TRIM41-206ENST00000514219 NTRK3Q16288 839 aa18.41■□□□□ 0.54
TRIM41-206ENST00000514219 SH3D19Q5HYK7 790 aa18.41■□□□□ 0.54
TRIM41-206ENST00000514219 LARP1BQ659C4 914 aaKnown RBP18.41■□□□□ 0.54
TRIM41-206ENST00000514219 CLEC10AQ8IUN9 316 aa18.41■□□□□ 0.54
TRIM41-206ENST00000514219 SH3GLB2Q9NR46 395 aa18.41■□□□□ 0.54
TRIM41-206ENST00000514219 AFG3L2Q9Y4W6 797 aa18.41■□□□□ 0.54
TRIM41-206ENST00000514219 CTDP1Q9Y5B0 961 aaPredicted RBP18.41■□□□□ 0.54
TRIM41-206ENST00000514219 MYPNQ86TC9 1320 aa18.41■□□□□ 0.54
TRIM41-206ENST00000514219 TRIM75PA6NK02 468 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 SLURP2P0DP57 97 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 CALML3P27482 149 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 OTUD7BQ6GQQ9 843 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 GALNT17Q6IS24 598 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 PPP1R18Q6NYC8 613 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 BTNL9Q6UXG8 535 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 CHRDL2Q6WN34 429 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 RAB11FIP4Q86YS3 637 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 SIAH1Q8IUQ4 282 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 C8orf76Q96K31 380 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 ELP3Q9H9T3 547 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 FAM217BQ9NTX9 383 aaPredicted RBP18.4■□□□□ 0.54
TRIM41-206ENST00000514219 CNTNAP5Q8WYK1 1306 aa18.4■□□□□ 0.54
TRIM41-206ENST00000514219 A0A1W2PRG0 241 aa18.39■□□□□ 0.53
TRIM41-206ENST00000514219 GTF2A2P52657 109 aa18.39■□□□□ 0.53
TRIM41-206ENST00000514219 JAG1P78504 1218 aa18.39■□□□□ 0.53
TRIM41-206ENST00000514219 PRPF38AQ8NAV1 312 aaKnown RBP18.39■□□□□ 0.53
TRIM41-206ENST00000514219 SPRYD3Q8NCJ5 442 aa18.39■□□□□ 0.53
TRIM41-206ENST00000514219 ACER1Q8TDN7 264 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms