RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 SMC5Q8IY18 1101 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 CHST13Q8NET6 341 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 STAG1Q8WVM7 1258 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 MAML3Q96JK9 1138 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 TINF2Q9BSI4 451 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 SENP6Q9GZR1 1112 aaPredicted RBP8.65□□□□□ -1.02
HTT-212ENST00000513639 SLC38A10Q9HBR0 1119 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 ZNF214Q9UL59 606 aaPredicted RBP8.65□□□□□ -1.02
HTT-212ENST00000513639 CNPY2Q9Y2B0 182 aa8.65□□□□□ -1.02
HTT-212ENST00000513639 KBTBD13C9JR72 458 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 HIP1O00291 1037 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 ORC4O43929 436 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 RANBP6O60518 1105 aaKnown RBP8.64□□□□□ -1.03
HTT-212ENST00000513639 PLA2G6O60733 806 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 FGAP02671 866 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 FGRP09769 529 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 PCP11498 1178 aaKnown RBP8.64□□□□□ -1.03
HTT-212ENST00000513639 CYBAP13498 195 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 SLC1A4P43007 532 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 NT5C2P49902 561 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 NUCB1Q02818 461 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 ZNF792Q3KQV3 632 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 SNRNP48Q6IEG0 339 aaKnown RBP8.64□□□□□ -1.03
HTT-212ENST00000513639 RCSD1Q6JBY9 416 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 B4GALNT3Q6L9W6 998 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 FAM160B2Q86V87 743 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 CHD1LQ86WJ1 897 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 C7orf61Q8IZ16 206 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 ANKRD35Q8N283 1001 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 REPS2Q8NFH8 660 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 RILPL2Q969X0 211 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 KIFC2Q96AC6 838 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 GMCL1Q96IK5 515 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 NUP88Q99567 741 aaPredicted RBP8.64□□□□□ -1.03
HTT-212ENST00000513639 LNPKQ9C0E8 428 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 PRO3102Q9H379 93 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 OSBPL3Q9H4L5 887 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 PRKAG2Q9UGJ0 569 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 STX8Q9UNK0 236 aa8.64□□□□□ -1.03
HTT-212ENST00000513639 TMEM232C9JQI7 657 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 PGK2P07205 417 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 HSPD1P10809 573 aaKnown RBP8.63□□□□□ -1.03
HTT-212ENST00000513639 RARBP10826 455 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 MCCP23508 829 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 SLC4A3P48751 1232 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 STAT2P52630 851 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 CTDSPL2Q05D32 466 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 IKQ13123 557 aaPredicted RBP8.63□□□□□ -1.03
HTT-212ENST00000513639 TKFCQ3LXA3 575 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 PRAMEF19Q5SWL8 479 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 MAMDC4Q6UXC1 1216 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 MFSD6Q6ZSS7 791 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 ZNF467Q7Z7K2 595 aaPredicted RBP8.63□□□□□ -1.03
HTT-212ENST00000513639 RNF180Q86T96 592 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 CPXCR1Q8N123 301 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 TRPV1Q8NER1 839 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 TTC14Q96N46 770 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 LBHD1Q9BQE6 289 aaPredicted RBP8.63□□□□□ -1.03
HTT-212ENST00000513639 TCP11L1Q9NUJ3 509 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 PNMA2Q9UL42 364 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 ISY1Q9ULR0 285 aaKnown RBP8.63□□□□□ -1.03
HTT-212ENST00000513639 SZT2Q5T011 3432 aa8.63□□□□□ -1.03
HTT-212ENST00000513639 PFASO15067 1338 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 SYNGAP1Q96PV0 1343 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 IGHDP01880 384 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 SDSP20132 328 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 CCDC178Q5BJE1 867 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 GJC2Q5T442 439 aaPredicted RBP8.62□□□□□ -1.03
HTT-212ENST00000513639 CCDC129Q6ZRS4 1044 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.62□□□□□ -1.03
HTT-212ENST00000513639 PLEKHM2Q8IWE5 1019 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 DCAF4Q8WV16 495 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 FAM227BQ96M60 508 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 GDF15Q99988 308 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 RNF41Q9H4P4 317 aaPredicted RBP8.62□□□□□ -1.03
HTT-212ENST00000513639 RAVER2Q9HCJ3 691 aaKnown RBP8.62□□□□□ -1.03
HTT-212ENST00000513639 IL17RBQ9NRM6 502 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 TOMM22Q9NS69 142 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 FAM184BQ9ULE4 1060 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 ZMYND8Q9ULU4 1186 aaPredicted RBP8.62□□□□□ -1.03
HTT-212ENST00000513639 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.62□□□□□ -1.03
HTT-212ENST00000513639 A0A0C4DFX4 3053 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 NAV1Q8NEY1 1877 aa8.62□□□□□ -1.03
HTT-212ENST00000513639 PLIN4Q96Q06 1357 aa8.61□□□□□ -1.03
HTT-212ENST00000513639 BAZ2AQ9UIF9 1905 aaKnown RBP8.61□□□□□ -1.03
HTT-212ENST00000513639 DNAJC25-GNG10A0A024R161 153 aa8.61□□□□□ -1.03
HTT-212ENST00000513639 ZNF213O14771 459 aa8.61□□□□□ -1.03
HTT-212ENST00000513639 TOP1P11387 765 aaKnown RBP8.61□□□□□ -1.03
HTT-212ENST00000513639 AKR1A1P14550 325 aa8.61□□□□□ -1.03
HTT-212ENST00000513639 ADCYAP1R1P41586 468 aa8.61□□□□□ -1.03
HTT-212ENST00000513639 NOVP48745 357 aa8.61□□□□□ -1.03
HTT-212ENST00000513639 NMIQ13287 307 aaPredicted RBP8.61□□□□□ -1.03
HTT-212ENST00000513639 LRRC41Q15345 812 aa8.61□□□□□ -1.03
HTT-212ENST00000513639 LRRC26Q2I0M4 334 aa8.61□□□□□ -1.03
HTT-212ENST00000513639 RRP12Q5JTH9 1297 aaKnown RBP8.61□□□□□ -1.03
HTT-212ENST00000513639 VPS53Q5VIR6 699 aa8.61□□□□□ -1.03
HTT-212ENST00000513639 C1orf53Q5VUE5 145 aa8.61□□□□□ -1.03
HTT-212ENST00000513639 GPR153Q6NV75 609 aa8.61□□□□□ -1.03
HTT-212ENST00000513639 SLC39A5Q6ZMH5 540 aa8.61□□□□□ -1.03
HTT-212ENST00000513639 LRRC47Q8N1G4 583 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms